Heatmap: Cluster_53 (HCCA cluster)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light - ZT1
Light - ZT3
Light - ZT5
Light - ZT7
Light - ZT9
Light - ZT11
Light - ZT13
Light - ZT15
Dark - ZT17
Dark - ZT19
Dark - ZT21
Dark - ZT23
Light - ZT25
Nutrient stress - Low nitrogen - 10%
Nutrient stress - Low phosphate - 0%
Nutrient stress - Low sulfate - 2%
Nutrient stress - Low micronutrients - 0%
Nutrient stress - NaCl - 75 mM
Nutrient stress - Mannitol - 100 mM
Nutrient stress - Control
Environmental stress - Prolonged darkness - 72h
Environmental stress - Cold - 4C
Environmental stress - Heat - 37C
Environmental stress - Control
Environmental stress - High light - 150 uE
Environmental stress - Control high light - 40 uE
0.34 1.39 1.24 0.47 -1.34 -2.3 -1.22 -0.33 0.04 0.69 0.93 1.23 0.81 -1.7 -1.02 -1.65 -0.17 -0.26 -0.36 0.41 -4.5 -1.14 -1.78 -1.03 -0.04 -0.5
0.66 1.29 1.08 0.82 0.53 -0.29 -0.82 -0.63 -0.64 0.08 0.45 0.63 0.5 -2.02 -1.0 -1.67 -0.11 0.1 -0.34 0.36 -6.04 0.27 -1.57 -0.18 -1.05 -0.93
1.45 1.33 0.94 0.28 -0.73 -1.41 -0.76 -0.13 -0.08 0.19 0.51 0.92 1.54 -3.02 -1.38 -2.64 -0.45 0.26 -0.2 0.42 -2.86 -3.25 -1.36 -0.89 -1.32 -1.19
1.05 1.39 1.22 0.92 0.41 -0.82 -0.89 -0.43 -0.21 0.22 0.51 0.79 1.16 -2.76 -2.29 -2.29 -0.35 -0.09 -0.64 0.6 -5.17 -0.61 -3.87 -1.57 -1.04 -1.01
0.75 1.06 1.11 1.2 0.85 0.25 0.48 0.75 0.53 0.88 1.1 1.14 1.26 -6.84 -7.03 -7.08 0.32 -6.16 -6.34 -5.18 -14.83 -3.44 -9.77 -8.31 -3.75 -2.42
1.13 0.93 0.93 0.8 0.71 0.55 0.4 0.52 -0.07 0.31 0.78 1.05 1.85 -3.62 -3.66 -4.01 -0.19 -3.04 -3.03 -3.86 -2.42 -1.94 -2.58 -3.05 -2.14 -1.16
1.13 1.16 1.01 0.75 0.29 -0.23 -0.48 -0.26 -0.23 -0.01 0.35 0.74 1.0 -1.26 -0.93 -0.75 -0.77 -0.04 -0.14 0.59 -4.29 -1.67 -3.86 -1.47 -0.9 -0.69
1.46 1.05 0.59 -0.18 -1.29 -2.28 -0.7 -0.11 -0.21 0.43 0.52 0.88 1.57 -1.39 -1.23 -1.36 -0.3 0.42 -0.56 0.22 -3.82 -1.16 -1.83 -0.58 -0.35 -0.42
1.16 1.22 0.81 0.15 -0.73 -1.19 -0.89 -0.26 0.11 0.42 0.81 1.15 1.19 -1.84 -1.63 -1.48 -0.39 -0.34 -0.51 0.08 -4.6 -0.79 -1.47 0.02 -0.56 -0.86
0.88 0.95 0.63 0.5 0.11 -0.43 -0.57 -0.18 0.17 0.28 0.67 0.89 1.06 -2.49 -1.86 -1.87 -0.43 -0.19 -0.46 0.18 -1.72 -0.46 -1.07 -0.53 -0.3 -0.31
0.92 1.14 0.95 0.65 0.11 -0.56 -0.41 0.08 0.26 0.43 0.67 0.86 1.14 -1.9 -1.92 -1.94 -0.77 -0.17 -0.94 -0.17 -4.78 -0.72 -2.01 -0.88 -0.08 -0.66
0.93 1.28 1.09 0.61 -0.02 -0.64 -0.66 -0.09 0.27 0.41 0.61 0.77 1.09 -3.7 -2.08 -3.24 -0.38 0.11 -0.45 0.47 -5.57 -1.06 -2.88 -0.78 -0.6 -0.57
1.15 1.4 1.17 1.01 0.44 -0.73 -0.13 0.45 -0.11 0.26 0.66 0.85 1.52 -2.53 -1.78 -1.23 -2.18 -1.74 -1.59 -0.82 -3.6 -1.4 -3.16 -2.15 -0.51 -1.11
0.57 0.61 0.73 0.81 0.58 0.06 0.11 0.21 0.2 0.51 0.61 0.56 0.57 -0.69 -1.67 -1.06 -0.31 -0.85 -0.97 -0.35 -3.52 -0.79 -1.29 -0.04 -0.41 -0.16
1.31 1.26 0.8 0.41 -0.5 -1.57 -0.81 -0.15 -0.08 0.26 0.5 0.66 1.3 -1.93 -1.51 -1.76 -0.41 0.36 -0.31 0.28 -2.77 -1.1 -2.04 -1.0 -0.21 -0.43
1.07 1.33 0.99 0.55 -0.07 -0.62 -0.48 -0.05 -0.08 -0.12 0.19 0.48 1.21 -1.76 -1.81 -1.6 -0.58 -0.12 -0.7 -0.15 -2.09 0.18 -2.13 -0.48 -0.19 -0.51
0.72 1.13 1.16 0.91 0.54 0.36 0.09 0.3 0.45 0.13 0.39 0.71 1.03 -1.48 -1.57 -1.64 -0.8 -0.54 -0.46 -0.28 -6.03 -1.6 -3.27 -1.74 -1.01 -1.03
0.64 1.19 1.04 0.86 0.47 -0.16 -0.04 0.19 0.2 0.27 0.44 0.57 0.88 -1.15 -1.48 -1.16 -0.18 0.13 -0.47 0.23 -8.72 -1.03 -6.19 -3.12 -0.56 -1.25
1.48 1.32 0.95 1.07 -0.07 -2.14 -1.45 -0.49 -0.48 0.0 0.67 1.02 1.75 -3.33 -3.6 -3.13 -1.2 -0.72 -1.52 -0.45 -4.0 -0.53 -3.48 -1.26 0.12 -0.06
0.63 0.89 0.9 0.71 0.28 -0.31 -0.45 -0.11 0.11 0.06 0.27 0.47 0.66 -1.26 -1.24 -0.65 -0.33 -0.34 -0.67 0.19 -1.56 0.17 -1.79 -0.27 -0.28 -0.17
0.99 1.37 1.04 0.57 -0.24 -1.31 -0.97 -0.31 0.04 0.14 0.33 0.51 0.98 -2.02 -1.16 -1.6 0.01 0.38 -0.17 0.56 -3.78 -0.78 -2.25 -1.06 -0.43 -0.39
0.47 1.1 0.82 0.39 -0.63 -1.2 -0.06 0.25 0.44 1.09 1.07 1.18 0.82 -2.76 -1.43 -2.58 -0.44 -0.03 -0.39 0.17 -3.66 -3.34 -1.99 -0.57 -0.38 -1.37
0.48 0.73 0.88 0.57 0.15 -0.16 -0.02 0.27 0.37 0.36 0.5 0.76 0.48 -1.26 -0.86 -0.56 -0.33 0.01 -0.14 -0.16 -4.35 -0.75 -1.32 -0.61 -0.28 -0.78
0.72 0.48 0.34 1.07 0.85 -0.15 0.45 0.68 0.39 0.85 1.02 0.95 1.26 -2.97 -3.5 -3.01 0.33 -1.8 -2.58 -1.94 -3.66 -0.86 -3.41 -2.01 -1.13 -0.51
1.07 1.1 0.76 0.66 -0.05 -0.69 -0.49 0.14 0.06 -0.01 0.41 0.69 1.04 -2.23 -2.16 -2.33 -1.08 -0.33 -0.99 -0.15 -1.3 -0.49 -0.21 -0.15 -0.18 -0.05
0.93 1.45 1.04 0.73 -0.24 -1.16 -1.02 -0.53 -0.34 -0.27 0.03 0.5 1.16 -0.93 -0.73 -0.88 -0.01 0.12 -0.65 -0.02 -2.92 -1.16 -1.65 -1.0 0.46 -0.46
1.15 1.32 1.05 0.65 0.06 -0.49 -0.05 0.2 0.23 0.2 0.29 0.44 1.18 -1.78 -1.3 -1.84 -0.33 0.13 -0.56 0.38 -7.43 -2.01 -3.74 -2.4 -0.58 -0.84
0.69 0.98 0.84 0.41 -0.25 -0.69 -0.22 0.23 0.52 0.75 1.04 1.29 0.89 -3.88 -3.54 -2.83 -0.95 -0.4 -1.12 0.13 -1.48 -0.92 -1.32 -0.38 -0.65 -0.93
0.51 0.86 0.75 0.38 -0.24 -1.01 -0.26 0.22 0.39 0.79 1.14 1.33 0.86 -3.84 -3.68 -2.83 -0.95 -0.21 -1.45 0.06 -1.36 -0.66 -1.04 -0.0 -0.44 -0.96
0.97 1.08 0.82 0.44 -0.08 -0.48 -0.2 0.15 -0.01 -0.04 0.2 0.39 1.1 -1.3 -1.39 -1.13 -0.46 0.03 -0.67 -0.07 -2.69 0.01 -1.99 -0.41 0.02 -0.25
0.7 1.17 1.05 0.75 -0.65 -0.76 0.24 0.75 -0.12 0.41 0.49 0.39 0.87 -0.94 -1.04 -0.82 -0.67 -0.16 -0.07 -0.43 -3.47 -3.96 -0.76 -1.97 -0.05 -0.44
1.07 0.94 1.2 0.85 0.27 0.23 0.6 0.9 0.71 0.62 0.86 0.76 0.99 -6.4 -6.69 -6.22 0.44 -2.47 -3.24 -1.28 -11.45 -1.45 -7.55 -3.9 -1.72 -0.68
1.26 1.5 1.29 0.87 0.01 -1.16 -0.94 -0.37 -0.44 -0.04 0.37 0.75 1.28 -4.06 -2.03 -3.87 -1.29 -0.24 -0.82 0.44 -2.88 -0.36 -2.27 -0.97 -0.6 -0.34
1.24 1.47 1.28 0.93 -0.06 -1.75 -0.98 -0.28 -0.41 -0.0 0.47 0.83 1.33 -4.12 -2.24 -3.92 -1.35 -0.13 -1.2 0.27 -2.74 -0.18 -2.06 -0.97 -0.49 -0.43
0.98 1.03 0.78 0.41 -0.16 -0.88 -0.58 -0.06 0.08 0.12 0.39 0.65 1.04 -1.62 -1.48 -1.27 -0.22 0.13 -0.29 0.43 -1.28 -0.57 -1.89 -0.25 -0.59 -0.48
0.63 0.79 0.74 0.54 0.22 -0.31 -0.32 -0.05 0.22 0.36 0.56 0.83 0.85 -2.32 -1.62 -2.18 -0.6 -0.63 -0.98 0.06 -2.28 -0.05 -0.1 0.23 -0.34 -0.53
0.83 1.01 0.69 0.43 0.36 0.17 0.41 0.46 0.45 0.75 0.91 0.91 1.29 -1.26 -2.22 -1.01 -0.86 -1.19 -1.81 -0.98 -2.48 -1.35 -1.18 -1.12 -1.65 -2.42
0.88 0.83 0.75 0.82 0.61 0.15 0.58 0.88 0.49 0.98 1.2 1.12 1.35 -8.25 -8.34 -8.21 0.72 -8.1 -7.82 -5.64 -13.59 -2.18 -7.09 -7.18 -2.51 -1.17
0.98 1.06 0.84 0.97 0.56 -0.21 0.29 0.58 0.41 0.97 1.34 1.33 1.52 -6.9 -6.13 -6.68 0.45 -4.94 -5.15 -4.53 -11.67 -2.81 -6.95 -6.2 -3.89 -2.43
1.05 0.95 0.86 1.01 0.77 0.01 0.36 0.66 -0.03 0.65 1.05 0.99 1.6 -10.04 -8.48 - 1.16 -8.0 -9.43 -6.49 - -3.54 - -10.49 -3.22 -0.98
1.14 0.97 0.72 1.11 0.66 -0.19 0.16 0.52 0.02 0.85 1.18 1.19 1.86 -6.67 -6.4 -7.24 0.5 -4.97 -5.36 -4.8 -12.24 -2.59 -5.21 -5.96 -3.65 -2.53
0.86 0.63 0.34 0.31 0.41 0.53 1.02 1.09 1.12 1.22 1.04 0.86 1.01 -7.31 -8.84 - -0.3 -7.27 -9.66 -5.44 - -2.98 -9.25 -4.65 -0.7 0.21
1.0 0.82 0.45 0.04 -0.55 -1.03 -0.38 0.04 0.3 0.59 0.93 1.26 1.07 -2.79 -2.31 -2.05 -0.32 0.02 -0.6 0.21 -5.65 -0.78 -0.87 -0.04 -0.25 -0.86
0.96 1.37 1.06 0.52 -0.32 -1.4 -0.65 -0.12 -0.2 0.01 0.38 0.64 1.19 -1.09 -0.88 -0.7 -0.05 0.17 -0.54 0.54 -3.3 -0.72 -2.68 -1.52 -0.74 -0.98
0.94 1.42 0.89 0.42 -0.41 -1.06 -0.71 -0.3 -0.3 -0.12 0.12 0.37 0.87 -0.94 -0.62 -0.59 -0.05 0.39 -0.07 0.55 -2.91 -0.21 -2.14 -1.47 -0.26 -0.57
0.87 1.45 1.36 0.96 0.35 -1.08 -1.2 -0.62 -0.25 0.11 0.47 0.72 0.98 -3.39 -2.47 -2.73 -0.5 0.14 -0.6 0.6 -5.03 0.14 -4.1 -1.48 -0.66 -0.77
0.78 0.53 0.44 0.2 -0.1 -0.57 -0.16 0.19 0.23 0.44 0.6 0.68 1.02 -1.64 -1.61 -1.64 -0.41 -0.04 -0.58 0.17 -1.06 -0.6 -0.07 -0.6 0.03 -0.42
1.38 1.06 0.69 0.4 0.05 -0.7 -0.38 -0.05 -0.11 0.34 0.61 0.93 1.5 -4.15 -1.49 -3.42 -0.32 0.3 -0.48 0.53 -8.51 -1.55 -3.54 -2.27 -0.44 -1.1
1.08 1.4 1.22 0.91 0.42 -0.2 -0.7 -0.25 0.1 0.21 0.73 0.97 1.1 -2.59 -1.87 -1.55 -0.88 -0.86 -0.68 -0.06 -4.59 -1.41 -2.14 -1.66 -1.34 -0.87
0.8 1.39 1.07 0.87 0.44 -0.45 -0.85 -0.51 -0.22 0.21 0.54 0.78 0.99 -2.81 -2.27 -1.04 -0.45 0.12 -0.57 0.32 -7.36 -0.71 -3.95 -1.29 -0.35 -0.45
0.42 1.15 0.92 0.93 0.29 -0.3 0.17 0.4 0.13 0.06 0.15 0.47 0.3 -0.81 -0.74 -0.62 -0.63 -0.26 -0.5 -0.66 -2.01 -1.34 -0.39 -0.51 -0.31 -0.4
1.7 1.42 0.34 0.02 -1.67 -3.3 -1.91 -0.58 -0.3 0.55 1.15 1.41 1.79 -3.0 -2.48 -3.1 -1.09 -0.35 -1.09 -0.47 -4.03 -0.55 -2.12 -0.75 -0.33 -0.77

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.