Heatmap: Cluster_159 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Aerial tissue - Light - ZT1
Aerial tissue - Light - ZT3
Aerial tissue - Light - ZT5
Aerial tissue - Light - ZT7
Aerial tissue - Light - ZT9
Aerial tissue - Light - ZT11
Aerial tissue - Dark - ZT1
Aerial tissue - Dark - ZT3
Aerial tissue - Dark - ZT5
Aerial tissue - Dark - ZT7
Aerial tissue - Dark - ZT9
Aerial tissue - Dark - ZT11
Roots
Root elongation and differentiation zone
Root meristematic zone
Aerial roots and rhizophores
Shoot tips
Microphyll
Strobili
Shoot apical meristem - AC
Shoot apical meristem - Core
Shoot apical meristem - P1
Stem - Top
Stem - Bottom
Whole plant
Aerial tissue - Stress - Dark
Aerial tissue - Stress - High light
Aerial tissue - Stress - Cont
Aerial tissue - Stress - 37C 1h
Aerial tissue - Stress - 37C 3h
Aerial tissue - Stress - 4C 1h
Aerial tissue - Stress - 4C 3h
0.2 0.03 -0.09 0.27 0.53 0.56 0.17 -0.22 -0.42 -0.18 -0.64 -0.59 -0.06 0.71 -0.38 0.53 0.37 0.27 1.01 -8.8 -3.83 -6.49 0.37 0.17 -2.3 -0.37 0.44 0.35 0.04 0.13 0.23 0.17
0.01 -0.02 -0.03 -0.29 0.29 0.34 -0.23 0.2 -0.1 -0.13 0.18 -0.67 1.03 -0.61 0.17 0.98 -0.16 0.5 1.17 - - - 0.64 0.91 -4.69 -1.53 -0.17 0.18 -0.1 0.03 -0.11 0.06
0.04 0.1 -0.3 -0.17 0.04 -0.17 -0.64 0.36 0.14 0.59 0.23 0.33 -1.84 0.08 -0.37 0.48 -2.13 -1.21 0.78 -5.0 -6.54 -2.77 -1.44 -0.54 1.28 2.0 1.59 0.83 -1.8 -1.93 -2.01 -2.52
0.54 0.54 0.06 -0.25 -0.61 -0.1 -0.52 -0.31 -0.08 0.34 0.27 0.26 0.35 0.1 -5.38 0.49 0.36 1.08 0.03 -8.19 -2.18 - 0.98 0.47 -3.67 -0.48 -1.35 -1.62 0.84 0.48 0.94 0.17
-1.67 -0.93 -0.58 -0.68 -0.63 -1.17 -0.23 -0.78 -1.1 -1.29 -1.36 -1.4 -0.26 0.95 0.55 0.74 -0.14 0.32 0.54 -1.55 -2.36 -3.36 0.9 1.34 -0.66 -0.15 0.38 -1.36 0.14 0.42 1.76 1.07
0.48 0.56 -0.5 -1.2 -1.36 -1.56 -1.58 -2.18 -1.31 -1.1 -1.06 -0.9 -1.32 -0.44 -4.93 1.06 -0.2 1.08 2.34 -3.97 -1.77 -8.36 1.41 1.9 -1.11 -1.22 -1.46 -1.06 0.71 1.05 -0.98 -0.28
0.13 0.24 0.07 0.11 0.19 0.14 0.01 -0.18 -0.04 0.01 -0.01 -0.02 -0.22 -0.2 -1.93 0.29 -1.09 -0.91 0.93 -4.37 -2.66 -6.41 -0.54 -0.36 -1.23 1.28 0.83 0.68 -0.09 -0.31 1.09 0.67
0.69 0.81 0.19 0.07 -0.07 -0.41 -0.67 -0.51 -0.46 -0.32 -0.25 0.08 0.53 0.41 -1.12 0.69 -0.74 -0.33 1.02 -3.47 -2.6 -7.69 -1.26 -0.8 0.19 1.96 0.55 0.75 -0.71 -0.47 -1.49 -0.77
0.54 0.4 -0.07 -0.31 -0.27 -0.59 -0.64 -0.55 -0.25 -0.4 -0.31 -0.29 -0.31 -0.46 -1.92 0.87 -1.37 -0.14 1.54 -5.6 -1.23 -6.93 -0.66 -0.53 -1.05 1.8 0.85 0.8 -0.14 -0.16 0.23 0.41
0.14 0.21 -0.06 0.33 0.11 -0.11 -0.4 -0.22 -0.12 -0.33 0.22 0.01 0.04 0.68 -1.63 0.29 0.15 -0.5 1.84 -7.18 -1.81 - 0.63 0.45 -0.66 0.48 -0.33 -0.23 0.42 0.47 -0.77 -1.91
-0.43 -0.01 0.34 0.63 0.86 0.71 0.18 -0.1 -0.61 -0.74 -1.04 -1.29 0.71 0.24 0.36 1.04 0.56 -0.65 0.75 -3.27 -2.88 -1.38 0.56 0.22 -1.08 0.45 0.17 0.38 -0.32 -0.23 -1.62 -1.65
0.04 -0.1 -0.11 0.04 0.14 0.12 -0.37 -0.29 -0.12 -0.28 -0.15 -0.57 0.2 0.72 -0.22 0.45 -0.17 0.78 0.77 -2.16 -1.69 -1.88 0.5 0.57 -0.04 -0.22 -0.05 -0.09 -0.18 -0.03 -0.07 0.5
0.18 -0.04 -0.18 -0.38 -0.44 -0.62 -1.07 -0.82 -0.34 -0.43 -0.63 -0.45 -0.42 -0.37 -3.59 -0.61 0.75 0.99 2.12 - -4.69 - 0.35 -0.48 -2.26 0.47 0.24 0.7 1.03 1.03 -0.33 0.43
0.26 0.07 0.14 -0.08 -0.44 -0.68 -0.74 -0.84 -0.5 -0.49 -0.63 -0.72 0.39 -0.99 -1.39 0.71 0.18 0.89 1.14 -1.09 -0.28 -2.96 1.15 0.87 -1.09 0.74 -0.92 -0.71 0.61 0.45 0.03 -0.3
0.71 0.48 0.36 -0.02 -0.05 -0.27 -0.14 -0.16 -0.28 0.11 0.23 0.49 0.54 0.08 -0.5 0.75 -0.01 0.63 0.62 -7.29 -5.15 -6.75 0.35 0.36 -3.8 -0.88 -1.47 -1.22 0.62 0.6 0.42 0.32
-0.55 -0.43 -0.01 0.04 -0.15 0.08 0.17 0.11 0.46 0.28 -0.04 -0.24 1.46 -2.28 -4.54 -0.36 -0.5 -0.94 1.94 -11.27 -5.05 - 0.99 1.52 -3.03 -0.65 -0.79 -0.59 -0.02 0.25 0.38 -0.37
0.45 -0.13 -0.24 -0.36 -0.39 -0.21 -0.22 0.02 0.2 0.52 0.14 -0.02 0.89 0.34 -1.06 0.59 -0.55 -0.27 -0.03 -3.42 0.06 -1.07 0.89 1.22 -0.65 -0.93 -1.49 -1.29 0.13 0.2 0.13 0.36
- - - - - - - - - - - - - - - - - 1.87 3.64 - - - 2.74 - - - - - 1.27 2.76 - -
- - - - - - - - - - - - 0.1 - - -0.52 2.2 1.63 2.93 - - - 1.01 0.3 -2.66 - - - 2.08 1.95 0.53 1.0
0.8 0.55 -0.23 -0.08 -1.11 -0.07 -0.84 -0.91 -0.58 0.56 0.43 0.01 0.59 -0.54 -1.88 1.27 -0.37 1.15 0.54 -6.72 - - 1.02 1.28 -4.09 -0.42 -1.68 -2.68 0.51 0.46 -0.0 0.15
- - - - - - - - - - - - - - - 1.34 0.78 1.21 3.69 - - - 1.35 1.12 - - - - 1.83 0.76 0.78 -0.28
-1.01 -0.71 -0.2 -0.12 0.17 -0.45 0.26 -0.17 0.66 0.19 0.06 -0.31 0.69 -0.95 -1.32 0.25 0.2 0.38 1.07 -2.29 -0.09 -1.28 0.89 1.16 -0.79 -0.56 -0.92 -1.26 0.05 0.09 0.1 0.37
- -3.48 - - - - - -2.63 - - - -3.45 1.26 -0.19 0.86 1.23 0.71 0.75 2.55 - - - 1.39 1.23 - 1.63 -0.4 0.9 0.48 -1.69 0.49 0.32
0.18 0.75 -0.35 -1.18 -1.04 -1.04 -0.32 -0.45 -1.08 -1.57 -0.64 0.26 1.09 -0.66 -0.16 1.13 0.04 -0.2 1.17 -3.33 -0.33 - 0.37 0.23 0.27 0.41 -0.06 -1.86 0.71 0.91 -0.05 0.25
-1.58 -0.97 -1.22 -1.41 -0.5 -0.9 -1.78 -0.65 -1.54 -0.22 -1.02 -1.37 1.41 -0.47 1.2 1.16 -1.59 0.0 2.4 - - - 1.27 1.72 1.14 0.34 -1.33 -1.06 -1.15 -1.32 -1.69 -1.43
- - - -4.74 - - - - - - - - 0.72 - - 1.92 1.09 -0.73 2.91 -0.24 -2.76 0.54 1.01 0.8 - - - - 1.43 1.16 1.33 1.4
-1.21 2.48 1.07 -1.39 - - - -1.97 -1.76 -2.07 - - 2.34 -0.26 - 3.2 - -0.34 0.8 - - - -1.84 - 0.39 -0.66 - - 0.52 -1.75 -0.19 -1.84
0.68 -0.91 -1.67 -1.01 -0.23 -0.57 -1.18 -0.76 -2.0 -1.34 -0.82 -1.25 0.93 0.37 -2.23 0.9 0.02 1.15 0.66 -5.35 -4.4 - 1.07 1.43 -3.99 0.97 1.1 -0.07 1.04 -0.17 0.06 -0.33
0.64 0.33 0.39 0.08 -0.69 -0.13 0.52 0.09 0.4 0.33 0.05 0.34 0.71 0.57 -2.84 0.11 -0.27 -1.3 0.8 - - - 1.34 1.04 -2.08 -0.92 -0.75 -0.82 -0.0 -0.24 0.11 0.23
-1.22 -3.68 -1.92 -2.05 -3.48 -1.0 -2.07 -1.13 -0.02 -0.36 -0.58 -1.68 0.58 -2.76 -1.43 1.75 1.09 - 2.89 -1.65 -0.22 -0.98 1.29 0.59 -1.48 -1.42 -2.12 - 0.94 0.27 0.43 -0.05
-3.29 -4.43 -5.13 -3.61 -5.8 - - -3.21 -4.31 -3.48 -1.43 -2.98 0.94 -1.44 -0.92 -0.79 0.37 -2.49 3.02 -0.99 -0.46 - 1.95 1.8 1.23 -2.72 -1.35 -0.37 0.43 0.21 0.37 0.98
- - - - - - - - - - - - - - - - 0.73 2.37 3.6 - - - 1.54 1.53 - - - - 1.49 1.61 - 0.5
-0.86 -1.56 -0.89 -0.49 0.32 -0.51 0.31 0.14 0.58 0.93 0.22 -0.68 1.03 -3.47 -2.58 0.86 0.45 0.75 0.06 -6.48 -0.4 -0.57 0.49 0.7 0.82 -0.68 -4.52 -1.59 0.42 0.12 0.08 0.54
-1.46 - - - - -0.25 1.0 -0.17 - - - - 1.04 - -1.13 -0.79 -1.1 - 3.08 - - - 2.21 3.3 - - - - -1.09 -1.09 -1.13 -
0.98 0.78 0.12 -0.48 -0.09 -0.39 0.29 -0.39 -0.01 -0.04 0.13 0.25 0.18 -0.25 -0.4 0.05 0.43 0.53 0.73 -7.9 -5.18 -3.42 0.25 0.5 -6.72 -0.58 -1.35 -0.94 0.3 0.42 0.65 0.91
-1.23 -2.73 -1.9 -1.73 -2.42 -2.48 -1.56 -2.03 -0.69 -1.49 0.08 -1.1 0.87 -2.21 -2.05 0.88 -0.29 -0.36 2.39 -0.01 -0.4 - 0.99 0.76 0.86 -0.65 0.32 -1.68 0.76 0.08 1.46 0.57
-1.01 -0.21 -0.13 0.39 0.29 0.43 0.04 -0.87 -1.55 -1.17 -2.23 -1.71 -0.97 0.28 -1.48 0.2 1.02 -0.7 0.86 -3.0 -1.65 - 1.37 1.06 0.76 0.07 0.37 0.76 0.42 0.27 0.13 -0.29
-0.17 0.8 -2.22 -0.69 0.3 -0.7 -0.45 -1.09 -0.4 0.55 -1.65 -0.59 0.95 0.1 -0.06 1.22 -0.63 -0.04 1.57 - - - 0.74 0.43 - -0.9 0.32 0.44 0.1 0.56 0.43 0.43
- - - - - - - - - - - - -0.19 -0.31 - 0.93 1.73 - 3.15 - - - 1.74 1.69 - - - - 1.69 1.72 -0.29 1.22
-0.27 -0.05 -0.01 -0.03 0.09 0.07 0.11 0.06 0.07 0.02 -0.2 -0.4 -0.33 -0.21 -0.16 0.48 -0.38 -0.04 0.8 -2.73 -1.69 -3.36 -0.58 -0.42 -0.42 1.21 0.6 0.75 0.17 0.31 0.08 0.27
- -1.5 - -1.87 - - -1.5 -1.21 -1.74 - - - 1.67 -0.51 - 1.94 0.61 -1.05 2.53 - - - 1.72 1.33 - 0.76 - 0.88 0.55 0.16 0.55 0.49
-2.01 -0.02 -1.93 -2.43 -1.02 -1.75 -1.5 -1.19 -1.19 -2.55 -1.7 -2.29 - -0.48 - -0.03 -0.3 0.03 2.44 - - - 0.48 1.43 - -1.15 0.42 -2.93 1.38 1.24 1.61 2.22
-3.23 -2.88 - 0.07 - -2.67 -1.87 -2.13 -1.96 -1.98 - -1.22 0.76 0.16 -1.44 1.46 -0.32 -1.14 2.93 - - - 1.65 2.42 -0.67 0.33 -1.51 - -0.51 - 0.68 0.35
-4.16 -1.59 -1.09 - -2.97 -2.97 -0.81 - 0.21 -2.42 - -1.52 0.91 -0.01 -0.51 0.99 1.03 - 2.64 - - - 1.59 1.43 - -1.91 -1.61 -0.79 1.03 1.05 1.17 0.64
-0.31 -0.43 -0.31 -0.61 -0.24 -0.3 -0.56 -0.67 -0.7 -0.53 -0.59 -0.86 -0.64 0.71 -0.06 0.46 -0.77 1.33 1.36 -2.34 -2.85 -3.34 -0.61 -0.32 -0.86 -0.15 0.63 -0.54 0.3 0.32 1.32 1.42
0.18 -0.34 -0.51 -0.13 0.15 -0.02 -0.38 -0.51 -0.57 -0.47 -0.41 -0.53 0.46 0.45 -0.69 1.46 -0.07 0.09 1.44 -2.46 -3.46 -6.3 0.29 0.34 -1.45 -0.09 0.41 -0.26 0.27 0.01 0.86 -0.11
-0.67 0.42 0.58 0.21 0.24 0.23 0.17 -0.31 -0.45 -0.35 -0.85 -0.64 -0.4 0.37 -1.01 1.45 0.21 0.31 0.98 -4.31 -1.86 -2.99 0.33 0.54 -1.58 0.22 0.07 0.06 0.25 -0.12 0.25 -0.55
0.24 0.37 0.04 -0.09 -0.1 -0.18 -0.53 -0.52 -0.39 -0.41 -0.3 -0.66 -0.04 0.25 -1.06 0.69 0.17 0.37 1.2 -3.21 -0.64 -4.52 0.57 0.71 -1.16 0.69 0.39 0.33 0.11 0.22 -0.2 -0.34
0.48 0.4 0.09 0.09 -0.04 -0.21 -0.38 0.24 -0.07 0.25 0.04 0.25 0.24 0.68 -2.8 0.27 -1.26 -2.03 0.34 -2.23 -0.45 - -1.61 -1.87 0.4 2.22 0.83 0.8 -0.79 -0.91 -1.3 -1.36
0.96 0.75 0.9 -0.11 -0.08 -0.42 0.11 -0.07 0.94 1.14 1.29 0.23 -2.43 -3.99 - -1.05 0.3 - 0.54 - - - -1.06 -2.21 - 0.11 -1.81 -0.62 0.61 0.27 1.41 1.38
0.36 0.48 0.28 0.26 -0.39 -1.12 -1.27 -1.95 -2.2 -2.13 -2.03 -1.11 0.23 -1.77 -2.86 0.26 0.5 0.22 1.79 -3.82 -1.48 -9.12 0.2 0.76 -1.3 2.06 -0.85 -0.84 0.24 0.33 0.81 0.9
- - -3.59 -4.7 -20.61 - -5.86 -4.4 -6.35 -8.96 -4.1 -5.07 -6.54 - - -0.46 -0.93 -3.51 3.86 - - -3.83 -2.16 -0.95 1.03 2.02 -3.07 -2.17 1.11 1.26 1.02 1.03
-3.9 -3.67 -4.66 -4.0 -4.46 -5.08 -7.11 -6.01 -5.2 -5.65 -3.54 -4.45 - - - -1.33 -0.95 -2.92 3.61 - -2.22 -5.03 0.17 -0.03 0.79 1.04 -2.79 -2.14 1.26 1.73 1.45 1.73
-0.16 0.13 0.16 0.42 0.38 0.3 0.18 -0.11 -0.25 -0.27 -0.3 -0.49 0.69 0.53 0.27 1.14 0.17 -0.79 0.81 -2.72 -1.98 -1.03 0.22 0.44 -1.9 0.77 -0.31 -0.33 -0.48 -0.42 -0.64 -0.47
-6.92 - - -8.02 - - -5.81 - - - - - 0.03 1.4 -3.19 1.75 -0.14 2.25 1.83 -3.25 -1.16 -4.05 0.09 0.22 -0.06 0.03 0.19 -2.26 1.3 1.43 1.55 0.43
-1.93 -6.17 - -5.47 - - - - - -6.36 - -4.48 -0.57 -3.09 -3.34 1.16 1.64 1.62 2.71 -3.76 - - 1.13 1.65 -2.47 - - - 1.51 2.13 0.81 0.29
- - - - - - - - - - - - - - - 2.52 1.38 0.84 2.62 - - - 1.24 0.21 - - - - 0.48 1.44 2.05 1.98
-0.62 -1.81 -1.14 -1.25 -0.53 -0.78 -0.82 -0.24 -0.07 -0.54 -0.2 -1.01 1.5 -0.47 -1.39 -1.22 -0.05 0.17 2.17 - - - 1.21 1.68 -3.71 -0.78 -1.6 -2.38 0.86 1.33 -0.0 0.62
0.78 -0.61 -1.18 -1.78 -1.24 -1.06 -1.76 -0.88 -1.63 -1.38 -0.82 -0.76 0.24 1.39 -3.27 1.56 -2.08 0.37 1.52 - -5.1 - 0.46 1.7 -1.63 0.32 -0.39 -2.04 0.25 -0.31 1.7 0.64
0.74 0.26 0.22 -0.45 -0.63 0.26 -0.71 0.08 0.13 -0.59 -0.04 -0.74 0.82 -0.85 -0.19 1.25 0.27 1.62 1.04 - - - 0.67 0.45 - -1.27 -1.33 -1.24 0.48 0.13 -0.43 0.08
0.56 0.27 -0.72 -0.9 -0.4 -0.95 -1.59 -1.47 -1.7 -1.66 -1.45 -0.6 -1.98 -0.18 -2.55 0.24 -1.55 0.26 1.82 -3.3 -1.72 -7.85 -0.78 0.07 0.4 1.19 1.28 1.23 -0.49 -0.45 1.41 1.3
-0.11 -0.71 -2.6 -1.16 -1.17 -2.25 -1.34 -0.64 -3.27 -1.72 -0.7 -0.53 -1.47 0.88 -0.37 2.6 -1.12 1.89 1.83 -2.3 - -2.63 -0.96 -0.48 - -0.51 -0.35 -1.95 1.1 1.22 0.11 -0.28
0.41 -0.3 -0.09 -0.37 -0.43 -0.4 -0.13 -0.04 0.37 0.52 0.28 0.1 1.09 0.31 -1.17 0.67 -0.5 -0.64 -0.02 -9.95 -6.95 -3.49 1.05 1.29 -4.19 -0.86 -1.1 -0.93 0.24 0.52 0.6 0.73
-1.18 -1.32 -2.96 -0.06 -4.06 -1.89 0.36 -1.07 -1.65 -0.34 0.28 0.09 -0.04 1.12 -4.67 -0.2 -1.42 0.72 2.49 - - - 1.49 2.26 -1.89 -0.94 -1.96 1.09 -0.92 -0.21 -2.9 -0.73
0.52 0.27 0.15 0.03 -0.45 0.05 -0.06 0.2 0.15 0.22 0.42 0.26 0.87 -0.14 -0.46 0.62 -0.16 0.65 0.56 -4.59 - - -0.06 -0.14 -2.25 -0.13 -0.16 -0.16 0.48 0.43 0.07 -0.03
0.24 -0.55 -1.06 -1.04 -1.03 -1.09 -0.53 -0.61 -0.4 -0.21 -0.46 -0.38 0.32 1.66 -0.12 1.31 -1.01 -0.08 0.71 -2.81 -0.95 -4.25 -0.41 -0.04 -0.38 -0.28 -0.27 -1.43 0.12 0.39 1.7 1.0
0.27 0.45 0.02 0.02 -0.23 -0.19 0.32 -0.02 0.34 0.43 0.46 0.42 0.47 0.36 -1.16 0.78 0.16 0.55 0.2 -7.77 -7.05 -8.41 0.44 0.07 -7.91 -0.79 -2.04 -2.15 0.53 0.5 0.76 0.59
- - - - - - - - - - - - -2.19 - - -1.04 1.6 0.31 3.27 - -0.69 - 1.17 0.32 -1.19 - - - 2.17 1.75 1.43 1.21
0.75 0.17 0.36 0.03 0.31 -0.11 -0.08 0.16 0.34 0.46 0.48 -0.05 0.79 -0.21 -1.4 0.62 -0.11 0.98 0.3 - - - -0.75 -0.88 -6.09 0.19 -0.67 -0.79 0.11 0.42 0.59 0.65

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.