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Heatmap: Cluster_197 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Showing raw values)

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Gene
Aerial tissue - Light - ZT1
Aerial tissue - Light - ZT3
Aerial tissue - Light - ZT5
Aerial tissue - Light - ZT7
Aerial tissue - Light - ZT9
Aerial tissue - Light - ZT11
Aerial tissue - Dark - ZT1
Aerial tissue - Dark - ZT3
Aerial tissue - Dark - ZT5
Aerial tissue - Dark - ZT7
Aerial tissue - Dark - ZT9
Aerial tissue - Dark - ZT11
Roots
Root elongation and differentiation zone
Root meristematic zone
Aerial roots and rhizophores
Shoot tips
Microphyll
Strobili
Shoot apical meristem - AC
Shoot apical meristem - Core
Shoot apical meristem - P1
Stem - Top
Stem - Bottom
Whole plant
Aerial tissue - Stress - Dark
Aerial tissue - Stress - High light
Aerial tissue - Stress - Cont
Aerial tissue - Stress - 37C 1h
Aerial tissue - Stress - 37C 3h
Aerial tissue - Stress - 4C 1h
Aerial tissue - Stress - 4C 3h
9.41 10.78 9.79 9.16 14.18 10.84 9.97 9.46 11.18 7.78 12.18 8.79 60.87 67.85 43.45 83.69 5.73 4.72 8.18 84.49 12.34 92.0 13.02 29.0 23.01 6.43 6.38 7.23 7.42 10.08 5.6 6.53
0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 4.29 0.0 0.0 12.02 20.56 22.58 14.88 59.72 45.09 0.0 11.76 15.39 83.8 0.0 0.0 0.0 16.63 18.36 9.15 8.7
5.47 5.46 4.15 4.77 6.0 5.02 4.79 4.75 4.56 5.38 5.62 4.98 6.35 4.15 9.75 5.6 2.74 4.07 5.28 12.5 11.55 16.65 3.35 3.75 8.22 4.41 6.23 4.7 2.43 2.88 5.34 5.4
8.57 9.79 8.71 8.19 7.74 8.74 12.5 10.74 10.51 12.34 11.16 11.44 1.18 5.08 5.19 2.61 3.35 2.67 3.69 5.8 14.86 10.5 2.16 1.72 8.12 8.76 7.47 6.17 4.83 5.45 5.18 4.36
39.42 43.56 40.68 48.28 45.31 44.07 45.73 43.27 47.55 44.98 48.6 44.0 31.71 29.99 39.11 42.18 24.96 18.5 28.45 47.09 38.21 81.57 29.44 30.4 40.52 25.51 20.55 21.02 24.67 25.69 31.33 32.41
273.24 255.83 293.11 279.61 309.91 326.54 455.27 294.57 350.91 307.67 288.19 230.21 312.84 426.94 680.01 293.91 557.94 815.41 337.12 1193.1 919.14 827.42 382.26 389.65 938.43 199.47 517.08 400.2 449.02 415.68 506.0 628.17
36.82 28.14 28.86 30.49 27.95 31.88 36.91 41.78 51.22 48.29 46.76 46.78 38.28 42.35 38.31 39.32 26.37 21.17 48.19 116.5 82.88 41.16 32.9 38.75 77.35 34.43 24.95 20.19 33.65 34.71 47.45 47.35
69.97 65.43 58.7 70.6 63.05 66.06 68.01 72.61 78.7 81.7 81.95 85.61 39.96 65.68 71.22 48.18 54.11 45.36 55.76 81.25 87.77 111.49 51.48 44.69 98.69 68.19 52.95 48.12 56.73 55.31 47.2 52.05
38.63 44.26 33.9 60.12 50.87 56.23 37.94 51.88 55.96 49.34 37.88 46.19 75.28 61.77 96.08 80.24 46.74 40.97 64.92 96.64 57.84 93.7 70.01 70.83 48.86 27.7 31.12 27.94 47.98 51.13 39.65 39.89
88.12 100.68 97.0 111.9 160.06 180.94 175.88 153.58 129.62 105.32 84.54 78.06 149.99 59.94 405.63 171.85 130.88 147.76 243.05 380.19 248.82 560.09 147.94 175.06 451.92 42.53 92.25 80.35 141.61 146.92 128.07 173.78
42.6 30.67 30.63 45.22 43.42 63.79 54.9 60.22 72.95 68.89 68.71 60.45 60.96 92.61 69.19 78.0 40.94 29.39 53.32 124.38 84.53 91.51 32.42 32.05 116.66 29.23 42.25 52.93 54.56 58.85 22.46 15.87
9.9 11.65 9.97 11.56 14.16 15.04 15.28 14.74 14.63 16.48 15.01 12.89 22.52 24.9 33.03 18.99 8.9 9.79 15.42 25.74 20.92 23.47 10.23 12.61 17.24 12.95 13.34 12.82 8.3 8.44 18.12 17.6
70.69 77.79 57.76 67.13 56.43 70.96 64.29 67.66 89.18 83.31 76.47 85.49 14.88 50.2 72.91 54.16 47.07 12.52 49.51 105.01 89.87 191.15 23.49 29.43 136.12 66.43 61.21 25.23 35.73 44.7 31.52 30.49
0.64 0.79 0.69 1.09 1.28 1.4 1.44 1.33 0.75 1.07 0.73 0.69 4.38 0.23 0.81 3.37 2.78 4.19 3.05 16.06 9.02 7.31 2.8 3.17 17.62 2.93 2.72 2.64 1.89 2.07 3.39 3.8
1.1 1.84 1.09 1.69 1.6 1.4 0.82 2.19 1.35 1.83 1.53 1.0 9.33 2.94 8.67 8.25 1.85 2.31 4.1 8.66 7.88 11.9 4.9 6.37 7.13 4.42 3.12 3.96 1.8 3.0 1.77 1.6
3.29 3.93 3.75 3.47 3.7 3.34 3.77 3.21 3.58 3.29 3.3 3.16 2.74 3.6 2.48 3.46 3.44 4.62 9.06 16.64 6.67 4.8 4.11 3.48 11.69 3.02 3.52 3.26 3.46 3.27 2.82 2.65
1.21 1.15 1.18 1.29 0.83 1.67 1.33 1.74 1.81 1.55 1.58 1.55 2.36 0.62 0.72 2.17 1.5 1.73 4.02 10.41 2.99 8.73 1.75 1.61 8.91 2.22 1.82 1.87 1.59 1.52 1.25 1.01
72.92 87.27 98.15 82.31 98.82 94.87 89.28 77.38 79.06 64.57 66.96 69.5 44.8 64.6 68.2 57.47 74.95 57.54 66.26 261.17 139.4 136.87 60.75 60.24 162.96 84.37 110.88 99.18 54.06 54.65 50.44 61.63
0.89 0.96 0.39 1.94 0.08 2.04 2.2 1.78 1.08 2.09 2.26 1.44 3.34 6.62 6.9 4.04 0.79 0.0 2.05 9.21 5.53 5.27 1.41 1.69 10.58 1.57 2.32 2.27 0.58 1.45 0.43 0.69
16.55 18.04 23.13 23.36 32.52 27.97 34.4 27.52 27.7 21.96 17.42 16.77 20.1 64.41 132.95 27.36 20.17 29.33 24.36 169.06 61.99 511.19 22.8 27.49 56.15 16.29 47.87 30.72 20.49 25.04 49.61 56.67
0.45 0.07 0.52 0.47 0.25 0.47 0.35 0.21 0.95 0.14 0.63 0.21 0.97 2.89 4.77 1.05 1.06 0.42 1.12 6.24 1.37 5.71 0.8 0.85 8.24 3.34 1.97 2.13 0.62 0.8 0.52 0.87
76.56 74.58 76.98 80.08 89.43 96.27 74.31 87.08 93.72 95.93 91.74 86.13 141.12 65.57 112.07 101.88 61.61 47.87 76.26 224.56 108.32 283.34 101.37 116.09 192.71 118.71 70.79 67.13 64.94 62.42 51.07 55.58
0.55 0.47 0.53 0.5 0.74 0.47 0.59 0.67 0.4 0.82 0.55 0.45 2.18 2.63 2.17 3.4 0.61 0.84 0.72 3.4 0.8 5.08 3.17 3.77 0.24 1.36 1.01 1.08 0.77 0.7 0.42 0.57
3.3 6.14 10.1 11.89 11.05 12.12 18.94 8.99 9.72 8.35 7.45 6.56 4.69 2.77 5.2 5.59 20.54 9.08 9.73 57.66 30.5 29.6 7.84 9.59 41.46 20.25 7.62 8.07 10.94 15.11 13.1 9.33
1.9 1.61 2.31 1.93 3.2 2.0 2.32 4.8 2.8 2.75 2.72 3.56 5.27 3.19 7.02 5.57 3.49 1.31 5.33 16.58 7.21 5.09 3.97 5.49 19.76 11.7 7.23 6.25 4.0 3.97 3.64 3.31
2.46 1.34 1.49 2.08 1.58 2.14 2.07 2.06 1.85 0.95 0.54 0.85 3.16 1.5 4.44 3.19 1.76 0.96 1.68 3.38 1.27 9.95 2.27 2.28 3.62 2.85 3.13 2.37 1.83 2.6 2.7 3.24
5.84 7.29 6.53 6.38 7.03 6.42 5.48 6.09 5.74 6.2 6.49 4.88 10.59 9.49 11.98 10.4 5.16 4.41 9.29 13.92 7.54 25.34 9.03 11.63 11.23 5.26 4.37 4.56 5.36 6.27 3.53 3.89
0.46 0.26 0.45 0.21 0.0 1.19 0.56 1.54 0.68 0.8 0.49 0.4 0.08 0.06 0.85 0.0 0.31 0.48 0.15 5.62 1.71 2.88 0.29 0.14 1.72 0.39 3.39 1.85 0.24 0.34 0.43 0.44
0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 5.45 2.79 4.51 3.81 1.53 0.56 2.0 5.03 0.0 2.77 1.3 1.2 6.78 3.42 1.66 0.63 0.82 1.16 0.57 0.67
3.61 4.24 4.15 5.25 4.25 4.6 4.97 4.98 4.59 5.7 3.42 3.99 3.16 1.93 3.4 4.19 3.01 0.72 5.71 13.57 3.78 4.52 4.02 4.42 19.6 3.27 2.29 2.99 2.8 4.05 2.57 2.82
0.0 0.0 0.35 0.0 3.38 0.0 0.0 0.0 0.72 0.0 0.0 0.0 0.0 0.0 1.54 0.0 0.0 0.0 0.0 7.13 4.43 3.56 0.0 0.0 6.64 0.0 0.04 0.0 0.0 0.0 0.0 0.0
0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.12 0.12 0.38 0.12 0.12 0.2 0.55 1.73 0.0 1.58 0.0 0.32 1.1 0.29 0.0 0.0 0.12 0.0 0.34 0.11
1.16 1.04 0.51 1.29 1.08 1.52 1.46 0.9 0.98 1.11 0.64 1.36 0.28 1.97 0.96 0.42 0.41 0.32 0.4 1.09 2.27 1.37 0.26 0.34 3.02 0.57 0.67 0.12 0.52 0.39 0.47 0.27
0.49 0.37 0.68 0.53 0.29 0.64 0.55 1.76 0.59 0.26 0.43 0.42 0.57 0.24 0.5 0.33 0.34 0.27 0.81 3.51 4.2 3.14 0.92 0.59 7.66 0.53 1.66 1.61 0.31 0.36 0.22 0.43
25.36 28.03 25.88 32.67 37.32 32.99 28.34 28.79 28.5 26.06 28.73 24.95 31.46 49.5 51.64 25.43 24.0 27.14 23.05 74.08 49.37 71.31 30.03 33.7 133.06 20.43 64.19 57.08 19.03 21.15 17.94 27.52
0.15 0.0 0.13 0.12 0.0 0.94 1.07 0.14 0.45 0.4 0.36 1.07 2.27 1.11 7.35 1.66 3.61 9.53 7.94 33.09 20.3 32.49 3.51 5.16 46.75 2.14 6.46 0.79 8.05 7.27 3.3 4.46
1.36 0.8 0.9 1.88 1.95 2.67 2.49 2.74 3.25 1.98 3.54 2.49 0.05 1.07 0.78 0.05 0.6 0.23 0.49 8.99 5.66 0.84 0.49 0.33 4.32 1.79 2.22 0.63 0.8 0.65 0.52 0.35
0.12 0.13 0.0 0.13 1.58 0.0 0.0 0.13 0.0 0.0 0.0 0.0 0.12 0.0 0.09 0.05 0.45 0.3 0.06 5.04 2.67 3.06 0.25 0.07 4.64 0.0 0.96 0.0 0.3 0.1 0.04 0.0
0.16 0.19 0.06 0.3 0.0 0.17 0.15 0.06 0.11 0.14 0.08 0.22 0.9 0.57 0.88 0.85 0.46 0.25 1.53 4.12 2.8 0.6 0.6 1.36 3.58 1.59 1.09 1.03 0.3 0.43 0.49 0.47
6.83 6.61 5.77 5.21 7.45 8.76 8.16 6.22 6.26 5.52 7.38 5.56 2.59 3.18 12.39 4.89 8.19 6.67 9.73 55.83 26.99 32.52 5.38 6.25 75.68 8.95 10.96 12.48 6.11 7.13 5.32 4.67
48.31 37.58 47.28 52.89 46.97 54.03 61.15 65.9 80.39 73.57 68.76 63.07 49.03 73.33 131.3 47.68 34.32 26.59 43.04 186.49 156.77 291.5 33.72 38.17 105.64 65.76 45.39 38.0 34.41 37.46 30.08 33.74
49.23 47.99 53.13 50.34 51.14 50.89 58.31 56.04 59.74 65.69 63.8 57.64 62.14 84.3 98.62 71.86 36.52 35.27 49.26 108.25 66.01 199.58 37.55 40.09 58.98 57.21 43.3 45.86 37.32 41.83 38.83 35.13
7.35 10.99 9.24 11.44 12.55 15.37 11.66 10.05 6.91 6.61 6.64 5.48 19.56 33.38 24.32 23.51 9.19 12.59 11.05 19.59 8.32 19.2 37.4 34.33 4.52 4.91 11.89 15.18 8.59 9.99 4.88 7.14
37.39 29.64 47.26 48.28 43.42 44.21 55.94 75.23 63.52 56.89 59.75 47.65 24.74 20.59 20.27 28.53 30.59 28.04 47.55 189.1 152.01 87.92 32.12 34.17 102.51 47.54 47.3 48.49 49.84 47.63 33.88 18.88
21.28 19.42 16.19 18.35 20.6 21.17 19.08 16.71 20.95 18.68 20.05 18.98 17.52 13.03 17.84 17.78 11.7 5.98 19.3 171.06 82.54 115.96 14.6 15.01 101.25 49.87 50.76 42.4 11.29 10.54 15.8 18.63
245.9 199.07 229.65 257.59 317.78 276.54 280.28 245.14 309.17 235.86 324.67 287.79 58.4 30.01 42.31 78.3 484.69 592.79 189.97 1681.22 2070.02 836.39 259.83 202.58 1567.26 281.96 254.59 344.56 614.93 500.66 358.78 202.55
43.76 37.95 39.88 38.62 38.6 40.12 49.93 53.81 55.82 65.23 58.23 54.15 11.68 14.11 12.05 11.83 29.95 12.64 19.41 200.1 99.46 56.55 19.51 12.41 214.99 47.24 39.61 38.19 32.49 32.88 29.67 29.6
11.74 10.75 12.04 13.67 18.19 15.71 15.48 18.03 15.4 15.62 14.49 11.58 13.7 10.38 16.27 19.65 12.5 7.02 16.54 43.36 15.48 35.59 14.2 13.78 36.21 17.6 13.51 9.49 12.15 12.53 11.64 12.11
313.53 317.09 473.13 377.73 394.13 448.65 337.65 368.81 324.78 305.87 346.0 307.99 791.16 1040.62 937.55 575.49 611.67 1456.39 530.81 2176.68 1585.76 2234.26 641.66 623.78 2572.29 217.59 341.85 245.3 549.45 480.2 600.72 746.44
10.99 9.7 8.22 9.02 7.14 8.53 5.74 7.49 9.89 11.94 9.44 12.56 41.13 19.24 13.7 55.21 16.54 15.81 30.86 127.25 68.2 12.47 19.65 19.83 101.11 16.32 10.27 9.57 23.63 27.79 29.26 36.09
10.0 16.48 14.87 14.64 19.58 11.64 9.35 9.64 9.73 8.83 9.65 9.7 37.05 21.4 33.52 32.57 7.02 21.03 14.85 40.52 5.44 32.04 10.66 13.88 13.4 8.83 11.59 11.77 6.13 6.63 5.98 5.61
1.48 1.53 1.81 1.91 2.79 2.24 1.77 1.86 1.89 1.73 1.18 1.15 1.74 1.86 5.47 2.9 1.35 2.48 3.83 6.38 1.47 10.08 4.74 5.54 0.89 1.17 1.62 1.73 1.1 1.42 0.85 1.04
45.52 47.25 43.86 47.19 47.29 47.81 41.39 39.4 42.35 40.51 40.71 37.41 41.22 59.06 50.44 45.86 31.57 26.89 36.0 76.3 45.7 122.1 41.98 41.62 97.87 30.2 37.4 37.53 28.88 29.7 33.19 34.49
8.84 9.82 7.07 8.1 10.18 9.35 10.56 6.25 9.77 9.05 10.33 8.0 6.76 96.31 96.99 34.72 10.74 10.93 28.5 92.09 39.21 204.93 9.93 18.11 14.66 16.97 14.49 6.26 11.52 16.59 16.79 21.08
353.52 339.73 252.21 290.95 270.34 368.9 295.31 341.21 356.48 354.68 361.66 399.66 387.77 939.46 976.76 354.36 250.84 572.63 265.23 1282.84 731.12 2811.84 256.76 307.75 132.93 300.25 191.09 157.71 268.16 231.86 311.98 360.96

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)