Heatmap: Cluster_197 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Aerial tissue - Light - ZT1
Aerial tissue - Light - ZT3
Aerial tissue - Light - ZT5
Aerial tissue - Light - ZT7
Aerial tissue - Light - ZT9
Aerial tissue - Light - ZT11
Aerial tissue - Dark - ZT1
Aerial tissue - Dark - ZT3
Aerial tissue - Dark - ZT5
Aerial tissue - Dark - ZT7
Aerial tissue - Dark - ZT9
Aerial tissue - Dark - ZT11
Roots
Root elongation and differentiation zone
Root meristematic zone
Aerial roots and rhizophores
Shoot tips
Microphyll
Strobili
Shoot apical meristem - AC
Shoot apical meristem - Core
Shoot apical meristem - P1
Stem - Top
Stem - Bottom
Whole plant
Aerial tissue - Stress - Dark
Aerial tissue - Stress - High light
Aerial tissue - Stress - Cont
Aerial tissue - Stress - 37C 1h
Aerial tissue - Stress - 37C 3h
Aerial tissue - Stress - 4C 1h
Aerial tissue - Stress - 4C 3h
-1.22 -1.02 -1.16 -1.26 -0.63 -1.02 -1.14 -1.21 -0.97 -1.5 -0.85 -1.32 1.47 1.63 0.99 1.93 -1.94 -2.22 -1.42 1.95 -0.83 2.07 -0.75 0.4 0.07 -1.77 -1.78 -1.6 -1.56 -1.12 -1.97 -1.75
- - - - - - - - - - - - -1.32 - - 0.17 0.94 1.08 0.47 2.48 2.07 - 0.13 0.52 2.97 - - - 0.63 0.78 -0.23 -0.3
-0.09 -0.09 -0.49 -0.29 0.04 -0.21 -0.28 -0.29 -0.35 -0.11 -0.05 -0.23 0.12 -0.49 0.74 -0.06 -1.09 -0.52 -0.14 1.1 0.99 1.52 -0.8 -0.63 0.5 -0.4 0.1 -0.31 -1.26 -1.02 -0.12 -0.11
0.26 0.45 0.28 0.19 0.11 0.28 0.8 0.58 0.55 0.78 0.64 0.67 -2.61 -0.5 -0.47 -1.46 -1.1 -1.43 -0.96 -0.31 1.05 0.55 -1.73 -2.06 0.18 0.29 0.06 -0.22 -0.57 -0.4 -0.47 -0.72
0.07 0.22 0.12 0.37 0.27 0.23 0.29 0.21 0.34 0.26 0.38 0.23 -0.24 -0.32 0.06 0.17 -0.59 -1.02 -0.4 0.33 0.03 1.12 -0.35 -0.3 0.11 -0.55 -0.87 -0.83 -0.6 -0.54 -0.26 -0.21
-0.76 -0.86 -0.66 -0.73 -0.58 -0.51 -0.03 -0.66 -0.4 -0.59 -0.69 -1.01 -0.57 -0.12 0.55 -0.66 0.27 0.81 -0.46 1.36 0.99 0.83 -0.28 -0.25 1.02 -1.22 0.16 -0.21 -0.05 -0.16 0.12 0.44
-0.19 -0.58 -0.54 -0.46 -0.59 -0.4 -0.18 -0.01 0.29 0.2 0.16 0.16 -0.13 0.01 -0.13 -0.09 -0.67 -0.99 0.2 1.47 0.98 -0.03 -0.35 -0.11 0.88 -0.28 -0.75 -1.05 -0.32 -0.27 0.18 0.17
0.09 -0.0 -0.16 0.11 -0.06 0.01 0.05 0.15 0.26 0.32 0.32 0.38 -0.71 0.0 0.12 -0.44 -0.28 -0.53 -0.23 0.31 0.42 0.77 -0.35 -0.55 0.59 0.06 -0.31 -0.45 -0.21 -0.25 -0.47 -0.33
-0.49 -0.29 -0.68 0.15 -0.09 0.05 -0.51 -0.06 0.05 -0.13 -0.52 -0.23 0.48 0.19 0.83 0.57 -0.21 -0.4 0.26 0.84 0.1 0.79 0.37 0.39 -0.15 -0.97 -0.8 -0.95 -0.17 -0.08 -0.45 -0.44
-0.98 -0.78 -0.84 -0.63 -0.11 0.06 0.02 -0.17 -0.42 -0.72 -1.04 -1.15 -0.21 -1.53 1.23 -0.01 -0.4 -0.23 0.49 1.13 0.52 1.69 -0.23 0.01 1.38 -2.03 -0.91 -1.11 -0.29 -0.24 -0.44 0.0
-0.42 -0.89 -0.9 -0.33 -0.39 0.16 -0.05 0.08 0.36 0.27 0.27 0.08 0.1 0.7 0.28 0.45 -0.48 -0.96 -0.1 1.13 0.57 0.68 -0.81 -0.83 1.03 -0.96 -0.43 -0.11 -0.06 0.05 -1.34 -1.85
-0.65 -0.41 -0.64 -0.42 -0.13 -0.05 -0.02 -0.07 -0.08 0.09 -0.05 -0.27 0.54 0.68 1.09 0.29 -0.8 -0.66 -0.01 0.73 0.43 0.6 -0.6 -0.3 0.15 -0.26 -0.22 -0.28 -0.9 -0.88 0.22 0.18
0.15 0.29 -0.14 0.08 -0.18 0.16 0.01 0.09 0.49 0.39 0.26 0.42 -2.1 -0.34 0.19 -0.23 -0.44 -2.35 -0.36 0.72 0.5 1.59 -1.44 -1.11 1.1 0.06 -0.06 -1.34 -0.83 -0.51 -1.02 -1.06
-2.36 -2.07 -2.26 -1.61 -1.38 -1.24 -1.2 -1.32 -2.14 -1.63 -2.17 -2.27 0.4 -3.87 -2.03 0.02 -0.25 0.34 -0.12 2.28 1.44 1.14 -0.24 -0.07 2.41 -0.18 -0.29 -0.33 -0.81 -0.68 0.03 0.2
-1.78 -1.04 -1.8 -1.17 -1.24 -1.44 -2.21 -0.79 -1.49 -1.05 -1.31 -1.93 1.3 -0.37 1.19 1.12 -1.03 -0.72 0.11 1.19 1.05 1.65 0.37 0.75 0.91 0.22 -0.28 0.06 -1.07 -0.34 -1.1 -1.24
-0.42 -0.16 -0.23 -0.34 -0.25 -0.4 -0.22 -0.45 -0.3 -0.42 -0.41 -0.47 -0.68 -0.29 -0.83 -0.35 -0.35 0.07 1.04 1.92 0.6 0.13 -0.1 -0.34 1.41 -0.54 -0.32 -0.43 -0.34 -0.43 -0.64 -0.73
-0.97 -1.04 -1.0 -0.88 -1.5 -0.5 -0.83 -0.44 -0.39 -0.61 -0.58 -0.61 -0.01 -1.93 -1.72 -0.12 -0.66 -0.45 0.76 2.14 0.34 1.88 -0.44 -0.56 1.91 -0.09 -0.38 -0.34 -0.57 -0.64 -0.92 -1.23
-0.24 0.02 0.19 -0.06 0.2 0.14 0.05 -0.15 -0.12 -0.41 -0.36 -0.31 -0.94 -0.41 -0.33 -0.58 -0.2 -0.58 -0.38 1.6 0.7 0.67 -0.5 -0.51 0.92 -0.03 0.37 0.21 -0.67 -0.65 -0.77 -0.48
-1.56 -1.45 -2.76 -0.44 -5.1 -0.36 -0.25 -0.56 -1.28 -0.33 -0.21 -0.87 0.35 1.34 1.4 0.63 -1.74 -18.63 -0.35 1.81 1.08 1.01 -0.89 -0.64 2.01 -0.74 -0.18 -0.21 -2.17 -0.86 -2.59 -1.93
-1.68 -1.56 -1.2 -1.19 -0.71 -0.93 -0.63 -0.95 -0.94 -1.28 -1.61 -1.66 -1.4 0.28 1.32 -0.96 -1.4 -0.86 -1.13 1.67 0.22 3.27 -1.22 -0.95 0.08 -1.71 -0.15 -0.79 -1.38 -1.09 -0.1 0.09
-1.81 -4.5 -1.61 -1.76 -2.65 -1.75 -2.19 -2.94 -0.74 -3.49 -1.32 -2.92 -0.7 0.87 1.6 -0.59 -0.57 -1.92 -0.49 1.99 -0.21 1.86 -0.98 -0.9 2.39 1.09 0.32 0.43 -1.34 -0.98 -1.6 -0.86
-0.36 -0.4 -0.35 -0.3 -0.14 -0.03 -0.4 -0.18 -0.07 -0.04 -0.1 -0.19 0.52 -0.58 0.19 0.05 -0.67 -1.04 -0.37 1.19 0.14 1.53 0.04 0.24 0.97 0.27 -0.47 -0.55 -0.6 -0.66 -0.95 -0.82
-1.26 -1.48 -1.3 -1.38 -0.81 -1.48 -1.13 -0.95 -1.7 -0.66 -1.25 -1.52 0.75 1.01 0.74 1.38 -1.1 -0.63 -0.85 1.39 -0.71 1.96 1.28 1.53 -2.43 0.06 -0.37 -0.27 -0.75 -0.9 -1.62 -1.2
-2.04 -1.14 -0.42 -0.19 -0.29 -0.16 0.48 -0.59 -0.48 -0.7 -0.86 -1.05 -1.53 -2.29 -1.38 -1.28 0.6 -0.58 -0.48 2.09 1.17 1.13 -0.79 -0.5 1.61 0.58 -0.83 -0.75 -0.31 0.16 -0.05 -0.54
-1.41 -1.64 -1.13 -1.38 -0.66 -1.33 -1.12 -0.07 -0.85 -0.87 -0.89 -0.5 0.06 -0.66 0.48 0.14 -0.53 -1.95 0.08 1.72 0.52 0.02 -0.34 0.12 1.97 1.21 0.52 0.31 -0.33 -0.34 -0.47 -0.61
0.02 -0.86 -0.71 -0.22 -0.62 -0.18 -0.23 -0.24 -0.39 -1.35 -2.17 -1.51 0.38 -0.69 0.87 0.4 -0.47 -1.33 -0.53 0.48 -0.93 2.04 -0.1 -0.09 0.58 0.23 0.37 -0.03 -0.4 0.1 0.16 0.42
-0.41 -0.09 -0.24 -0.28 -0.14 -0.27 -0.5 -0.35 -0.43 -0.32 -0.25 -0.67 0.45 0.29 0.63 0.43 -0.58 -0.81 0.26 0.85 -0.04 1.71 0.22 0.59 0.54 -0.56 -0.83 -0.76 -0.53 -0.3 -1.13 -0.99
-0.93 -1.75 -0.99 -2.1 - 0.42 -0.66 0.79 -0.39 -0.15 -0.85 -1.16 -3.51 -3.95 -0.06 - -1.54 -0.87 -2.52 2.66 0.95 1.7 -1.61 -2.63 0.95 -1.18 1.93 1.06 -1.86 -1.4 -1.06 -1.01
- - - - - - - - - - - - 1.9 0.94 1.63 1.39 0.07 -1.39 0.46 1.79 - 0.93 -0.17 -0.29 2.22 1.23 0.19 -1.2 -0.83 -0.32 -1.35 -1.13
-0.34 -0.11 -0.14 0.2 -0.11 0.01 0.12 0.12 0.0 0.31 -0.42 -0.2 -0.54 -1.25 -0.43 -0.13 -0.61 -2.67 0.32 1.57 -0.28 -0.02 -0.19 -0.05 2.1 -0.49 -1.0 -0.62 -0.71 -0.18 -0.83 -0.7
-9.26 -25.08 -1.31 -24.15 1.96 -15.41 -21.4 -24.17 -0.27 -16.84 - - - - 0.83 - - - - 3.04 2.35 2.04 - - 2.93 -7.85 -4.39 - - - - -
- - - - - - - - - - - - -0.9 -0.86 0.74 -0.87 -0.89 -0.2 1.28 2.95 - 2.82 - 0.49 2.29 0.35 - - -0.95 - 0.6 -1.03
0.35 0.19 -0.83 0.5 0.24 0.73 0.68 -0.02 0.11 0.29 -0.51 0.58 -1.72 1.11 0.08 -1.11 -1.16 -1.5 -1.19 0.26 1.32 0.59 -1.79 -1.43 1.73 -0.67 -0.45 -2.97 -0.82 -1.22 -0.96 -1.73
-1.16 -1.57 -0.69 -1.05 -1.93 -0.78 -0.99 0.67 -0.9 -2.09 -1.37 -1.4 -0.95 -2.22 -1.14 -1.74 -1.7 -2.01 -0.44 1.67 1.93 1.51 -0.26 -0.9 2.8 -1.07 0.59 0.55 -1.81 -1.61 -2.3 -1.36
-0.56 -0.42 -0.53 -0.2 -0.01 -0.18 -0.4 -0.38 -0.39 -0.52 -0.38 -0.59 -0.25 0.4 0.46 -0.56 -0.64 -0.46 -0.7 0.98 0.4 0.93 -0.32 -0.15 1.83 -0.87 0.78 0.61 -0.98 -0.82 -1.06 -0.44
-5.5 - -5.72 -5.81 - -2.82 -2.63 -5.59 -3.89 -4.06 -4.22 -2.63 -1.55 -2.58 0.15 -2.0 -0.88 0.52 0.26 2.32 1.62 2.29 -0.92 -0.36 2.82 -1.63 -0.04 -3.06 0.28 0.13 -1.01 -0.57
-0.38 -1.14 -0.98 0.08 0.13 0.59 0.49 0.62 0.87 0.15 1.0 0.49 -5.18 -0.73 -1.18 -5.22 -1.56 -2.97 -1.86 2.34 1.67 -1.08 -1.87 -2.42 1.28 0.01 0.32 -1.51 -1.15 -1.46 -1.76 -2.35
-2.43 -2.34 - -2.33 1.32 - - -2.34 - - - - -2.4 - -2.75 -3.6 -0.49 -1.07 -3.33 2.99 2.08 2.27 -1.32 -3.21 2.87 - 0.59 - -1.1 -2.64 -3.88 -
-2.33 -2.04 -3.82 -1.43 - -2.23 -2.4 -3.75 -2.82 -2.49 -3.36 -1.86 0.18 -0.49 0.15 0.08 -0.8 -1.67 0.94 2.37 1.81 -0.42 -0.41 0.77 2.17 1.0 0.46 0.37 -1.42 -0.9 -0.71 -0.78
-0.82 -0.87 -1.06 -1.21 -0.69 -0.46 -0.56 -0.95 -0.95 -1.13 -0.71 -1.12 -2.22 -1.92 0.04 -1.3 -0.56 -0.85 -0.31 2.21 1.16 1.43 -1.16 -0.95 2.65 -0.43 -0.14 0.05 -0.98 -0.76 -1.18 -1.37
-0.51 -0.87 -0.54 -0.38 -0.55 -0.35 -0.17 -0.06 0.22 0.1 -0.0 -0.13 -0.49 0.09 0.93 -0.53 -1.0 -1.37 -0.68 1.44 1.19 2.08 -1.03 -0.85 0.62 -0.07 -0.6 -0.86 -1.0 -0.88 -1.19 -1.03
-0.28 -0.32 -0.17 -0.25 -0.22 -0.23 -0.03 -0.09 -0.0 0.14 0.09 -0.05 0.06 0.5 0.72 0.27 -0.71 -0.76 -0.28 0.86 0.14 1.74 -0.67 -0.58 -0.02 -0.06 -0.46 -0.38 -0.68 -0.51 -0.62 -0.77
-0.88 -0.3 -0.55 -0.24 -0.11 0.18 -0.22 -0.43 -0.97 -1.04 -1.03 -1.31 0.53 1.3 0.84 0.79 -0.56 -0.11 -0.29 0.53 -0.7 0.5 1.46 1.34 -1.58 -1.47 -0.19 0.16 -0.66 -0.44 -1.48 -0.92
-0.51 -0.84 -0.17 -0.14 -0.29 -0.27 0.07 0.5 0.26 0.1 0.17 -0.16 -1.1 -1.37 -1.39 -0.9 -0.8 -0.92 -0.16 1.83 1.52 0.73 -0.73 -0.64 0.95 -0.16 -0.17 -0.13 -0.09 -0.16 -0.65 -1.49
-0.6 -0.74 -1.0 -0.82 -0.65 -0.61 -0.76 -0.95 -0.63 -0.79 -0.69 -0.77 -0.88 -1.31 -0.86 -0.86 -1.47 -2.43 -0.74 2.4 1.35 1.84 -1.15 -1.11 1.65 0.63 0.65 0.39 -1.52 -1.62 -1.03 -0.79
-0.82 -1.12 -0.92 -0.75 -0.45 -0.65 -0.63 -0.82 -0.49 -0.88 -0.42 -0.59 -2.89 -3.85 -3.36 -2.47 0.16 0.45 -1.19 1.96 2.26 0.95 -0.74 -1.1 1.86 -0.62 -0.77 -0.33 0.51 0.21 -0.27 -1.1
-0.14 -0.34 -0.27 -0.32 -0.32 -0.26 0.05 0.16 0.21 0.44 0.27 0.17 -2.04 -1.77 -2.0 -2.02 -0.68 -1.93 -1.31 2.06 1.05 0.23 -1.3 -1.96 2.16 -0.03 -0.28 -0.33 -0.57 -0.55 -0.7 -0.7
-0.46 -0.59 -0.42 -0.24 0.17 -0.04 -0.06 0.16 -0.07 -0.05 -0.15 -0.48 -0.24 -0.64 0.01 0.28 -0.37 -1.2 0.04 1.43 -0.06 1.14 -0.18 -0.23 1.17 0.12 -0.26 -0.77 -0.41 -0.37 -0.47 -0.41
-1.21 -1.2 -0.62 -0.95 -0.88 -0.7 -1.11 -0.98 -1.16 -1.25 -1.07 -1.24 0.12 0.52 0.37 -0.34 -0.25 1.0 -0.45 1.58 1.12 1.62 -0.18 -0.22 1.82 -1.74 -1.09 -1.57 -0.4 -0.6 -0.28 0.04
-1.19 -1.37 -1.61 -1.48 -1.82 -1.56 -2.13 -1.75 -1.35 -1.07 -1.41 -1.0 0.71 -0.39 -0.88 1.13 -0.6 -0.67 0.3 2.34 1.44 -1.01 -0.36 -0.34 2.01 -0.62 -1.29 -1.39 -0.09 0.14 0.22 0.52
-0.6 0.12 -0.02 -0.05 0.37 -0.38 -0.69 -0.65 -0.64 -0.78 -0.65 -0.64 1.29 0.5 1.15 1.11 -1.11 0.48 -0.03 1.42 -1.48 1.08 -0.5 -0.12 -0.17 -0.78 -0.38 -0.36 -1.3 -1.19 -1.34 -1.43
-0.74 -0.69 -0.45 -0.37 0.18 -0.14 -0.48 -0.41 -0.39 -0.52 -1.06 -1.11 -0.51 -0.41 1.15 0.23 -0.87 0.0 0.63 1.37 -0.75 2.03 0.94 1.17 -1.47 -1.08 -0.6 -0.51 -1.16 -0.8 -1.53 -1.25
-0.01 0.04 -0.07 0.04 0.04 0.06 -0.15 -0.22 -0.12 -0.18 -0.17 -0.3 -0.16 0.36 0.14 -0.0 -0.54 -0.77 -0.35 0.73 -0.01 1.41 -0.13 -0.14 1.09 -0.6 -0.3 -0.29 -0.67 -0.63 -0.47 -0.41
-1.63 -1.48 -1.95 -1.75 -1.43 -1.55 -1.37 -2.13 -1.48 -1.6 -1.4 -1.77 -2.02 1.82 1.83 0.34 -1.35 -1.32 0.06 1.75 0.52 2.91 -1.46 -0.59 -0.9 -0.69 -0.92 -2.13 -1.25 -0.72 -0.7 -0.38
-0.41 -0.47 -0.9 -0.7 -0.8 -0.35 -0.67 -0.47 -0.4 -0.41 -0.38 -0.24 -0.28 1.0 1.05 -0.41 -0.91 0.28 -0.83 1.45 0.63 2.58 -0.88 -0.61 -1.83 -0.65 -1.3 -1.58 -0.81 -1.02 -0.59 -0.38

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.