Heatmap: Cluster_196 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Aerial tissue - Light - ZT1
Aerial tissue - Light - ZT3
Aerial tissue - Light - ZT5
Aerial tissue - Light - ZT7
Aerial tissue - Light - ZT9
Aerial tissue - Light - ZT11
Aerial tissue - Dark - ZT1
Aerial tissue - Dark - ZT3
Aerial tissue - Dark - ZT5
Aerial tissue - Dark - ZT7
Aerial tissue - Dark - ZT9
Aerial tissue - Dark - ZT11
Roots
Root elongation and differentiation zone
Root meristematic zone
Aerial roots and rhizophores
Shoot tips
Microphyll
Strobili
Shoot apical meristem - AC
Shoot apical meristem - Core
Shoot apical meristem - P1
Stem - Top
Stem - Bottom
Whole plant
Aerial tissue - Stress - Dark
Aerial tissue - Stress - High light
Aerial tissue - Stress - Cont
Aerial tissue - Stress - 37C 1h
Aerial tissue - Stress - 37C 3h
Aerial tissue - Stress - 4C 1h
Aerial tissue - Stress - 4C 3h
0.1 0.1 0.13 0.39 0.51 0.35 0.23 0.44 0.65 0.46 0.43 0.3 -0.06 -0.53 -0.67 0.32 -0.32 -1.2 0.45 -3.51 -2.98 -3.72 0.12 0.16 -1.35 1.06 0.35 0.39 -0.13 -0.16 -0.71 -0.67
0.08 -0.09 -0.05 0.16 0.25 0.15 0.11 0.4 0.32 0.37 0.37 0.18 0.01 -0.03 0.09 0.04 -0.48 -0.96 -0.01 -3.31 -1.45 -2.42 -0.24 -0.15 -0.04 1.33 0.64 0.5 -0.41 -0.37 -0.37 -0.37
0.19 0.28 0.11 0.2 0.48 0.46 0.43 0.6 0.69 0.67 0.74 0.53 -0.19 -0.11 0.66 -0.0 -0.88 -1.75 -0.13 -4.42 -3.32 -2.7 -0.49 -0.3 -1.87 1.05 0.43 0.28 -0.64 -0.52 -0.63 -0.71
0.16 0.1 0.14 0.3 0.3 0.2 0.17 0.45 0.5 0.47 0.47 0.41 -0.14 -0.34 -0.1 -0.04 -0.41 -1.79 -0.0 -2.12 -1.99 -3.34 -0.13 -0.04 -0.16 0.87 0.54 0.42 -0.32 -0.2 -0.17 -0.13
-0.0 0.27 0.27 0.26 0.22 0.36 0.4 0.45 0.34 0.45 0.32 0.09 0.28 0.18 0.19 0.51 -0.65 -0.87 0.43 -2.35 -2.42 -2.27 -0.23 -0.11 -1.83 0.56 0.48 0.54 -0.52 -0.38 -0.42 -0.56
0.04 0.03 0.1 0.19 0.24 0.24 0.37 0.52 0.41 0.48 0.38 0.17 0.08 0.2 0.45 0.36 -0.46 -0.93 -0.01 -2.17 -1.15 -0.84 -0.22 -0.04 -1.71 0.35 0.18 0.19 -0.32 -0.27 -0.04 -0.21
0.17 0.11 0.19 0.31 0.32 0.19 0.24 0.49 0.39 0.44 0.36 0.2 -0.19 -0.35 0.02 -0.32 -0.64 -0.93 -0.06 -3.28 -1.59 -2.36 -0.44 -0.31 -0.22 0.79 0.75 0.84 -0.6 -0.43 0.15 0.02
0.27 0.27 0.18 0.33 0.37 0.26 0.24 0.45 0.43 0.48 0.44 0.37 -0.26 -0.53 -0.18 -0.06 -0.35 -0.87 0.1 -3.45 -1.48 -4.17 -0.16 -0.21 -0.5 0.74 0.56 0.49 -0.19 -0.21 -0.2 -0.22
0.32 0.19 0.1 0.25 0.24 0.12 0.09 0.32 0.4 0.48 0.49 0.36 -0.07 -0.1 0.28 -0.07 -0.64 -1.09 -0.31 -3.16 -3.18 -2.54 -0.25 -0.09 -0.31 1.01 0.64 0.57 -0.7 -0.45 -0.11 0.12
0.14 0.16 0.1 0.21 0.32 0.18 0.34 0.31 0.29 0.35 0.38 0.14 0.21 0.56 0.19 0.38 -0.43 -0.74 0.08 -1.32 -1.16 -1.46 -0.02 0.08 -1.4 0.37 0.06 0.13 -0.34 -0.29 -0.3 -0.31
-0.05 0.17 0.3 0.32 0.6 0.48 0.43 0.56 0.25 0.32 0.29 0.07 0.07 -0.19 0.43 0.12 -0.36 -1.29 -0.13 -0.94 -3.73 -3.39 -0.04 0.08 -2.1 0.49 0.56 0.61 -0.31 -0.16 -0.57 -0.34
0.21 0.11 0.12 0.25 0.22 0.19 0.16 0.4 0.18 0.21 0.21 0.14 0.09 0.21 0.2 0.22 -0.69 -1.04 0.02 -1.29 -1.91 -1.12 -0.27 -0.18 -0.21 0.69 0.65 0.66 -0.65 -0.57 -0.21 -0.16
-0.01 0.2 0.14 0.28 0.2 0.14 0.24 0.36 0.27 0.45 0.39 0.3 0.13 -0.02 -0.56 0.21 -0.52 -0.96 0.19 -1.74 -2.03 -3.28 -0.24 -0.18 -0.31 0.8 0.55 0.54 -0.3 -0.34 0.01 -0.01
0.15 0.21 0.14 0.32 0.45 0.27 0.12 0.32 0.3 0.38 0.33 0.32 0.04 -0.18 -1.08 0.59 -0.6 -1.1 0.3 -3.22 -1.75 -3.05 -0.0 0.24 -0.0 0.85 0.29 0.32 -0.28 -0.31 -0.36 -0.3
0.22 0.06 -0.15 0.28 0.33 0.27 0.4 0.73 0.57 0.58 0.53 0.29 -0.4 0.66 0.39 -0.53 -1.01 -1.28 -0.55 -5.12 -6.99 -6.13 -0.48 -0.65 -2.99 1.22 1.15 1.05 -0.87 -0.72 -0.58 -0.54
-0.18 0.11 0.85 0.75 0.44 0.43 0.55 0.66 0.49 0.44 0.47 0.22 0.46 0.48 0.13 -0.16 -0.83 -0.57 -0.49 -2.95 -3.28 -2.42 -0.01 0.48 -0.67 0.77 -0.2 -0.71 -0.62 -0.49 -1.25 -1.28
-0.11 0.18 0.85 0.84 0.25 0.46 0.42 0.65 0.46 0.65 0.5 0.15 0.58 0.09 -0.47 0.33 -0.73 -3.57 -0.56 - -1.0 -5.21 -0.37 -0.26 -0.99 1.28 0.14 -0.01 -0.94 -1.13 -0.65 -0.48
-0.01 -0.01 0.03 0.2 0.06 0.2 0.25 0.44 0.52 0.66 0.57 0.45 0.04 0.07 0.35 -0.12 -0.69 -0.66 -0.3 -1.5 -1.37 -1.79 -0.49 -0.38 -0.41 0.73 0.51 0.48 -0.52 -0.51 -0.27 -0.09
0.01 -0.09 -0.14 0.11 0.17 0.18 0.24 0.52 0.47 0.52 0.46 0.32 0.11 0.61 0.54 0.09 -0.76 -1.25 -0.32 -1.49 -1.92 -1.46 -0.28 -0.18 -0.4 0.81 0.52 0.47 -0.57 -0.5 -0.46 -0.51
0.03 -0.01 0.29 0.36 0.42 0.38 0.48 0.72 0.58 0.5 0.6 0.19 0.06 -0.63 -0.7 0.14 -0.4 -0.85 -0.06 -5.44 -3.52 -3.16 -0.09 0.25 -1.47 0.79 0.56 0.6 -0.17 -0.16 -0.73 -0.47
0.37 0.27 0.21 0.33 0.56 0.57 0.4 0.38 0.21 0.25 0.08 -0.07 -0.25 -0.34 0.41 0.04 -0.07 -0.34 0.26 -2.99 -2.36 -1.95 -0.13 -0.16 -1.91 0.26 0.45 0.67 0.08 0.14 -0.58 -0.75
-0.16 0.0 0.16 0.36 0.26 0.14 0.31 0.58 0.4 0.43 0.29 0.13 0.1 -0.27 -0.52 -0.1 -0.5 -1.16 -0.28 -1.02 -1.49 -0.97 -0.54 -0.49 0.19 1.3 0.44 0.53 -0.41 -0.53 -0.39 -0.29
-0.06 -0.05 0.31 0.35 0.63 0.48 0.49 0.45 0.4 0.35 0.16 0.03 -0.06 -0.05 0.54 0.17 -0.32 -0.69 0.32 -1.64 -3.66 -2.12 -0.01 0.04 -1.89 0.67 0.19 0.29 -0.38 -0.3 -0.38 -0.49
-0.01 0.11 0.24 0.29 0.29 0.11 0.35 0.59 0.34 0.38 0.32 0.38 0.07 0.17 0.48 0.16 -0.57 -1.13 -0.06 -1.47 -2.08 -2.14 -0.37 -0.32 -0.69 0.86 0.33 0.21 -0.31 -0.38 -0.27 -0.18
0.19 0.02 0.07 0.32 0.49 0.37 0.16 0.51 0.57 0.52 0.47 0.16 0.12 -0.5 -0.2 0.07 -0.5 -0.93 -0.01 -3.74 -2.63 -5.32 -0.19 0.07 -0.34 0.57 0.66 0.67 -0.17 -0.13 -0.41 -0.39
-0.22 0.04 0.42 0.56 0.45 0.29 0.6 0.75 0.36 0.39 0.17 0.13 0.65 0.59 0.21 -0.33 -0.31 -0.94 -0.01 -3.54 -1.82 -2.74 -0.2 -0.27 -0.6 1.11 -0.31 -0.18 -0.64 -0.65 -0.72 -0.47
0.54 0.45 0.33 0.37 0.31 0.29 0.13 0.32 0.45 0.48 0.44 0.45 -0.24 0.26 0.36 0.04 -0.38 -1.05 0.22 -5.07 -4.11 -2.04 -0.43 -0.47 -1.82 0.53 0.42 0.4 -0.4 -0.33 -0.18 -0.08
0.18 0.11 -0.08 0.13 0.27 0.2 0.29 0.31 0.36 0.37 0.41 0.19 0.12 -0.19 -0.14 0.28 -0.56 -0.87 0.12 -2.43 -1.13 -1.93 -0.25 -0.21 -0.36 0.74 0.51 0.42 -0.38 -0.34 -0.04 0.2
0.36 0.42 0.2 0.44 0.38 0.33 0.09 0.32 0.41 0.5 0.64 0.5 0.06 -0.16 0.26 0.14 -0.66 -1.1 0.26 -4.07 -4.97 -8.21 -0.22 0.0 -3.0 1.03 0.53 0.38 -0.44 -0.59 -0.53 -0.32
0.06 0.31 0.99 0.6 0.35 0.49 0.97 1.01 0.63 0.46 0.75 0.55 -0.4 0.57 0.19 -0.39 -1.47 -1.15 -1.41 -3.11 -2.32 - -0.01 0.1 -1.92 0.66 0.14 0.67 -1.32 -1.25 -2.43 -2.05
0.06 0.16 0.36 0.31 0.44 0.38 0.38 0.4 0.34 0.23 0.31 0.02 0.04 0.07 0.64 0.13 -0.37 -0.74 -0.12 -1.87 -1.65 -3.08 0.16 0.28 -2.25 0.5 0.45 0.54 -0.43 -0.33 -0.68 -0.56
-0.19 -0.21 0.47 0.65 0.42 0.4 0.37 0.57 0.79 0.78 0.72 0.3 0.69 0.26 0.14 -0.02 -1.23 -3.1 -0.56 -2.7 -2.46 -1.8 0.07 0.47 -0.86 1.38 -0.55 -0.46 -0.96 -0.98 -1.21 -1.45
0.06 0.47 0.47 0.96 0.75 0.41 1.17 1.46 0.33 0.51 1.13 0.1 -1.09 0.69 0.72 -1.18 -3.5 -4.46 -5.14 -1.87 -3.7 - -3.59 -2.13 0.19 0.66 0.97 1.25 -3.6 -3.53 -4.14 -
-0.15 0.08 0.28 0.28 0.05 0.12 0.49 0.6 0.7 0.73 0.61 0.37 0.54 -0.73 -1.45 0.0 -0.28 -0.67 -0.05 -3.63 -1.79 -4.89 -0.03 -0.13 -0.67 0.91 0.31 0.37 -0.0 -0.11 -0.62 -0.47
-0.08 0.17 0.14 0.45 0.61 0.24 0.7 0.63 0.5 0.47 0.38 0.12 -0.21 -0.22 0.83 0.01 -0.52 -1.57 0.08 -6.64 - - -0.49 -0.19 -4.1 0.95 0.71 0.89 -0.35 -0.34 -0.97 -0.65
0.22 0.18 0.31 0.17 0.55 0.38 0.37 0.71 0.38 0.26 0.43 0.02 0.01 -0.11 0.61 0.01 -0.29 -0.47 -0.06 -3.87 -1.89 -2.3 -0.12 0.07 -1.86 0.21 0.34 0.37 -0.29 -0.04 -0.37 -0.42
0.3 0.23 0.2 0.3 0.44 0.33 0.2 0.3 0.31 0.44 0.28 0.14 0.1 -0.25 0.24 0.18 -0.29 -0.89 0.2 -2.17 -1.69 -1.96 -0.06 -0.03 -1.23 0.57 0.51 0.68 -0.23 -0.15 -0.81 -0.81
0.15 0.06 0.32 0.28 0.44 0.4 0.15 0.25 0.26 0.22 0.05 -0.06 0.17 -0.19 0.39 0.3 -0.58 -1.03 0.1 -0.69 -2.09 -1.09 -0.15 0.0 -0.53 0.39 0.43 0.57 -0.53 -0.47 -0.21 -0.08
-0.12 0.01 0.14 -0.01 0.16 0.13 0.12 0.42 0.34 0.4 0.36 0.08 -0.18 0.56 0.36 0.15 -0.62 -0.95 0.39 -1.43 -2.09 -1.84 -0.33 -0.34 -0.34 0.88 0.67 0.65 -0.31 -0.17 -0.95 -0.54
-0.26 -0.27 0.05 0.11 0.23 0.35 0.42 0.56 0.46 0.31 0.23 0.05 0.11 -0.39 0.37 0.11 -0.3 -0.74 0.05 -2.63 -1.41 -1.42 -0.07 0.08 -0.13 0.81 0.51 0.62 -0.12 -0.03 -0.79 -1.16
0.43 0.04 0.14 0.17 0.27 0.29 0.11 0.48 0.34 0.39 0.37 0.17 -0.09 -0.07 0.21 -0.02 -0.58 -1.07 -0.15 -0.73 -1.59 -1.18 -0.35 -0.22 -1.13 0.72 0.73 0.75 -0.42 -0.33 -0.55 -0.45
0.1 -0.07 0.23 0.16 0.24 0.26 0.1 0.33 0.43 0.44 0.48 0.23 0.22 -0.38 0.35 0.36 -0.54 -1.19 0.24 -1.78 -1.26 -1.16 -0.19 0.04 -0.69 0.64 0.32 0.24 -0.25 -0.05 -0.5 -0.44
0.23 0.31 0.11 0.32 0.34 0.55 0.36 0.16 0.06 0.2 0.0 -0.01 0.02 0.06 0.67 0.46 -0.31 -0.49 0.4 -2.19 -2.04 -1.02 -0.38 -0.35 -0.75 0.48 0.36 0.27 -0.12 -0.18 -0.53 -0.76
0.45 0.09 0.05 0.46 0.52 0.39 0.37 0.39 0.4 0.47 0.54 0.57 -0.17 -0.54 -0.08 0.02 -0.44 -0.72 -0.04 -3.59 -3.26 -7.18 -0.51 -0.68 -2.0 0.97 0.63 0.38 -0.27 -0.22 0.07 -0.01
0.14 0.35 0.3 0.37 0.38 0.17 0.42 0.3 0.28 0.29 0.28 0.1 -0.13 0.27 0.58 0.24 -0.33 -1.2 -0.0 -0.96 -2.93 -5.03 -0.35 -0.42 -1.97 0.21 0.62 0.67 -0.33 -0.2 -0.12 0.01
-0.17 -0.29 -0.04 0.25 0.54 0.3 0.43 0.56 0.74 0.62 0.34 0.29 0.27 -0.37 0.59 0.13 -0.14 -0.42 0.22 - -6.09 -3.48 -0.25 -0.4 -2.07 0.77 0.42 0.45 0.13 0.18 -1.0 -1.22
0.22 0.07 0.07 0.22 0.33 0.38 0.47 0.4 0.26 0.33 0.06 0.14 0.08 -0.04 0.48 0.3 -0.43 -0.96 0.11 -1.96 -2.59 -2.86 0.01 0.13 -0.95 0.49 0.64 0.55 -0.24 -0.2 -0.49 -0.53
-0.22 0.06 0.2 0.43 0.42 0.49 0.51 0.53 0.47 0.5 0.43 0.24 0.07 -0.46 0.14 0.33 -0.39 -1.33 0.21 -3.63 -7.85 - 0.04 0.08 -2.55 0.87 0.3 0.67 0.01 0.03 -0.72 -0.79
0.2 0.0 0.1 0.15 0.18 0.08 0.04 0.24 0.37 0.35 0.35 0.06 -0.05 0.21 0.78 0.24 -0.52 -1.27 -0.14 -1.67 -2.38 -1.29 -0.33 -0.36 -0.47 0.66 0.68 0.57 -0.55 -0.52 0.21 -0.11
0.16 0.61 0.68 0.61 0.86 0.51 0.45 0.64 0.94 0.03 0.91 0.41 -0.19 0.75 0.24 -0.2 -0.72 -0.51 -0.05 - - - -0.11 -0.58 -3.4 0.32 -0.44 -1.89 -0.81 -0.46 -0.28 -0.07
-0.06 -0.03 0.24 0.18 0.34 0.19 0.51 0.42 0.43 0.39 0.4 0.22 0.11 0.01 0.48 0.2 -0.28 -0.59 0.08 -3.33 -4.21 -3.47 -0.35 -0.27 -0.73 0.71 0.47 0.54 -0.19 -0.13 -0.43 -0.37
0.16 0.1 0.03 0.23 0.21 0.09 0.11 0.48 0.39 0.4 0.4 0.35 0.27 0.04 0.27 0.42 -0.69 -1.28 0.17 -3.51 -3.1 -5.56 -0.21 -0.03 -0.23 0.96 0.44 0.31 -0.23 -0.26 -0.26 -0.36
0.43 0.18 0.07 0.33 0.2 0.1 0.16 0.31 0.38 0.39 0.45 0.4 -0.18 -0.48 -0.16 -0.18 -0.29 -1.16 -0.05 -3.06 -0.84 -2.36 -0.17 -0.21 0.12 0.68 0.57 0.49 -0.41 -0.26 -0.0 -0.08
0.44 0.26 0.35 0.38 0.39 0.09 0.2 0.46 0.5 0.4 0.5 0.43 -0.47 -0.21 0.21 0.08 -0.44 -1.65 0.19 -4.31 -1.87 -6.53 -0.45 -0.58 -1.8 0.76 0.8 0.67 -0.18 -0.16 -0.31 -0.2
-0.53 0.0 0.6 0.62 0.24 0.15 1.28 0.92 0.5 0.63 0.35 0.08 -0.14 0.1 -0.2 -0.73 -0.75 -0.36 -0.47 -5.1 -2.03 -3.4 -1.18 -1.3 -1.56 1.91 0.12 0.22 -0.72 -1.01 -0.84 -0.86
-0.05 0.11 0.21 0.21 0.35 0.22 0.35 0.66 0.44 0.54 0.42 0.22 0.19 -0.26 0.52 0.08 -0.69 -0.98 0.02 -4.87 -2.27 -1.02 -0.18 -0.02 -0.43 0.58 0.48 0.69 -0.31 -0.31 -1.26 -0.9
0.24 -0.07 0.09 0.26 0.39 0.12 -0.07 0.37 0.41 0.6 0.47 0.34 0.22 0.3 0.52 0.09 -0.75 -0.94 -0.25 -4.56 -2.17 -2.79 -0.43 -0.24 -0.71 0.77 0.71 0.58 -0.79 -0.75 -0.21 0.19
0.1 0.32 0.42 0.33 0.54 0.27 0.35 0.41 0.29 0.5 0.27 0.33 0.64 -0.24 0.31 0.54 -0.58 -2.07 0.25 -6.85 -7.15 - -0.25 -0.36 -1.82 1.06 0.37 0.29 -0.19 -0.18 -0.6 -0.8
0.21 0.28 0.35 0.44 0.54 0.47 0.33 0.35 0.24 0.16 -0.13 -0.03 -0.21 -0.36 0.53 0.21 -0.04 -0.78 0.59 -3.8 -2.25 -1.4 -0.14 -0.2 -1.29 -0.16 0.66 0.73 -0.1 0.03 -0.68 -0.84
-0.35 0.18 0.45 0.71 0.58 0.43 0.29 0.66 0.54 0.52 0.32 0.15 0.48 -0.12 0.25 0.36 -0.52 -1.47 0.28 -3.04 -4.0 -2.63 -0.45 -0.71 -0.98 1.22 0.08 0.29 -0.51 -0.47 -1.14 -1.13

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.