Heatmap: Cluster_38 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Aerial tissue - Light - ZT1
Aerial tissue - Light - ZT3
Aerial tissue - Light - ZT5
Aerial tissue - Light - ZT7
Aerial tissue - Light - ZT9
Aerial tissue - Light - ZT11
Aerial tissue - Dark - ZT1
Aerial tissue - Dark - ZT3
Aerial tissue - Dark - ZT5
Aerial tissue - Dark - ZT7
Aerial tissue - Dark - ZT9
Aerial tissue - Dark - ZT11
Roots
Root elongation and differentiation zone
Root meristematic zone
Aerial roots and rhizophores
Shoot tips
Microphyll
Strobili
Shoot apical meristem - AC
Shoot apical meristem - Core
Shoot apical meristem - P1
Stem - Top
Stem - Bottom
Whole plant
Aerial tissue - Stress - Dark
Aerial tissue - Stress - High light
Aerial tissue - Stress - Cont
Aerial tissue - Stress - 37C 1h
Aerial tissue - Stress - 37C 3h
Aerial tissue - Stress - 4C 1h
Aerial tissue - Stress - 4C 3h
0.19 0.48 0.49 0.26 -0.01 0.25 0.52 0.83 0.57 0.79 0.84 0.47 -0.36 -0.55 -0.6 -0.08 -0.66 -1.1 -0.11 -1.58 0.43 -2.79 -0.39 -0.12 -0.08 0.24 -0.39 -0.7 -0.46 -0.49 -0.43 -0.33
0.58 0.51 0.15 0.19 0.14 0.29 0.32 1.01 0.48 0.57 0.37 0.44 -0.83 0.03 -0.8 -0.23 -1.23 -1.75 -0.61 -3.16 1.39 -3.84 -1.07 -0.55 -1.5 0.5 0.16 -0.17 -0.84 -0.68 0.46 0.06
0.64 0.0 0.04 0.06 0.02 -0.22 0.38 0.39 0.39 0.58 0.52 0.63 -0.51 0.61 -0.82 0.05 -0.8 -1.2 -0.24 -1.64 0.61 -1.51 -0.6 -0.27 -0.57 -0.19 -0.63 -0.66 -0.23 -0.31 0.83 0.54
0.3 0.04 0.12 0.19 0.31 -0.05 0.17 0.31 0.53 0.64 0.49 0.66 -1.83 -2.78 -1.42 -1.21 -0.09 -0.44 0.39 -2.52 1.29 -1.98 -0.11 -0.3 0.36 0.39 -0.4 -0.38 0.13 -0.04 -0.1 -0.01
0.21 0.19 0.34 0.29 -0.04 -0.01 0.22 0.33 0.4 0.63 0.54 0.55 0.22 -0.19 -1.48 0.29 -0.53 -0.68 0.03 -2.31 -0.41 -3.06 -0.2 -0.13 -2.06 0.47 -0.16 -0.37 -0.31 -0.35 0.73 0.74
0.49 0.18 0.24 0.22 -0.05 0.09 0.15 0.34 0.48 0.59 0.79 0.6 0.09 -0.74 -0.87 0.1 -0.64 -0.44 0.17 -4.76 -0.05 -4.42 -0.13 -0.12 -1.48 0.6 -0.22 -0.24 -0.45 -0.52 0.47 0.58
0.21 0.29 0.18 0.33 -0.06 0.26 0.36 0.5 0.52 0.77 0.6 0.48 0.25 0.04 0.47 0.07 -0.66 -0.32 -0.31 -2.09 -0.93 -0.9 -0.35 -0.26 -1.25 -0.04 -0.46 -1.07 -0.73 -0.6 0.27 0.54
0.33 0.29 0.27 0.14 0.26 0.4 0.2 0.13 0.02 0.31 0.08 0.1 -0.06 -0.19 0.25 0.07 -0.32 -0.27 0.08 -0.65 -0.14 -0.6 -0.46 -0.36 -0.35 -0.03 0.35 0.38 -0.29 -0.27 -0.35 -0.29
0.4 0.46 0.37 0.12 0.07 0.16 0.2 0.11 0.48 0.65 0.46 0.52 0.14 0.38 0.11 0.19 -0.49 -0.34 0.24 -0.91 -1.79 -3.51 -0.26 -0.15 -3.63 0.21 -0.84 -1.25 -0.2 -0.16 0.61 0.39
0.64 -0.02 -0.35 -1.1 -0.9 -0.78 0.58 0.18 0.9 0.9 0.79 0.64 -2.18 -0.56 -3.2 -2.47 -0.63 -1.4 -0.84 -5.89 2.39 -5.57 -0.9 -0.94 -0.13 0.44 0.38 -0.12 -0.4 -0.77 0.32 0.3
0.41 0.41 0.57 0.33 0.43 0.47 0.23 0.27 0.28 0.27 0.32 0.16 -0.02 -0.26 -0.41 -0.03 -0.69 -0.72 -0.23 -0.23 0.38 -1.32 -0.1 -0.08 -0.27 -0.2 -0.19 -0.0 -0.44 -0.32 -0.4 -0.38
0.77 0.07 0.21 0.23 0.17 0.12 0.34 0.33 0.27 0.33 0.79 0.49 0.0 -0.5 -1.02 0.83 -0.58 -0.32 0.22 -3.02 -1.39 -2.1 -0.32 -0.12 -2.02 0.46 0.04 -0.38 -0.49 -0.54 0.5 0.35
1.67 0.81 0.62 -0.38 -0.75 0.31 -0.02 1.6 0.96 0.18 1.21 0.19 - - -3.21 -3.19 -1.71 - -0.14 - 0.99 1.42 -1.62 -2.26 - -0.91 0.71 1.14 -2.31 -2.26 -0.77 -1.43
-0.78 -0.29 0.07 0.16 -0.19 -0.15 0.36 0.58 0.83 0.97 0.68 0.68 -0.64 -2.09 -1.6 -0.95 -0.9 -1.38 -0.64 -1.21 1.5 -0.35 -0.5 -0.33 0.91 -0.11 -1.05 -1.3 -0.15 -0.29 0.21 0.63
0.48 0.22 -0.07 -0.02 -0.07 -0.07 0.3 0.38 0.47 0.63 0.66 0.69 -0.05 0.2 0.13 -0.11 -0.81 -0.5 -0.09 -2.26 -0.85 -2.38 -0.66 -0.51 -0.61 0.2 -0.46 -0.7 -0.21 -0.09 0.73 0.75
0.24 0.03 0.16 0.22 0.14 0.34 0.28 0.55 0.56 0.61 0.47 0.28 -0.17 -0.7 -1.38 -0.37 -0.38 -2.31 -0.27 -0.74 1.05 -1.79 -0.24 -0.29 -0.3 0.64 0.02 -0.19 -0.13 -0.22 -0.27 -0.09
1.34 -0.28 -1.07 -3.04 0.68 -1.37 -1.17 1.52 1.9 0.57 1.72 0.53 -2.26 -1.02 -0.77 -2.28 -1.34 - -2.3 - 2.51 - -1.24 -1.38 0.63 -0.35 0.02 - -0.97 -2.39 -2.55 -
-0.17 -0.08 0.03 -0.3 0.55 -0.07 -0.26 0.24 -0.01 0.18 0.14 0.03 -0.52 -0.65 -0.8 -0.2 -0.06 -0.64 0.38 -3.98 1.35 -1.16 -0.02 -0.29 0.13 0.38 0.36 0.22 0.07 0.05 0.16 0.09
-0.17 -0.01 -0.03 0.06 -0.23 -0.08 0.5 0.69 0.84 1.08 0.82 0.79 -1.9 -1.61 -0.98 -1.39 -0.09 -0.23 -0.4 -0.83 0.71 -0.68 -0.31 -0.54 -1.0 0.1 -0.87 -0.25 0.54 0.55 -0.24 -0.33
-0.17 -1.43 0.12 -0.93 -0.41 0.5 0.82 0.85 1.07 0.44 0.48 0.04 -0.75 -0.82 -0.24 -0.73 -1.01 0.04 -0.74 - 2.01 -0.19 -1.6 -1.5 -0.8 -0.29 0.51 0.79 -0.64 -0.61 -0.63 -0.51
0.15 0.31 0.34 0.35 -0.33 0.66 0.26 0.85 1.25 1.62 1.36 1.41 -5.39 -3.29 -4.44 -5.4 -0.56 - -2.97 - 1.91 - -4.51 -3.88 -2.11 0.77 -0.17 0.64 -0.94 -0.55 -1.68 -1.74
0.11 -0.08 0.66 0.44 -0.99 0.22 -0.12 1.06 0.84 0.44 0.86 0.7 -2.08 -0.56 -1.32 -2.07 -1.55 -0.17 0.45 - 1.87 - -0.58 -0.51 -1.45 0.01 0.45 -1.06 -1.86 -1.7 -0.36 1.01
-0.02 -0.24 -0.23 -0.22 -0.31 -0.09 0.2 0.37 0.42 0.68 0.7 0.53 0.07 -0.3 -0.95 -0.16 -1.3 -0.25 -0.42 -0.15 1.76 -6.11 -0.78 -0.51 -0.2 0.31 -0.42 -0.94 -0.68 -1.1 0.6 0.5
1.15 1.54 1.18 1.57 0.64 1.17 0.19 1.9 1.19 1.79 1.83 1.79 - - - - -5.99 -2.92 - - - - - - - - -4.49 - - - - -
0.45 0.38 0.1 0.11 0.47 0.48 0.28 0.25 0.39 0.68 -0.1 0.31 -0.14 -0.14 0.37 -0.19 -0.65 -5.32 0.09 -1.57 0.59 -1.9 -0.46 -0.06 0.47 -0.05 0.12 0.08 -0.3 -0.57 -0.58 -0.4
0.39 -0.27 -0.68 0.88 0.09 0.52 0.7 0.31 -0.15 0.38 0.23 0.2 -1.99 0.83 1.54 -1.44 -1.96 0.94 -1.23 0.21 0.9 -2.16 -2.29 -1.77 1.12 -0.19 0.69 0.03 -6.58 -2.92 - -4.48
0.21 0.0 0.04 0.21 0.06 0.23 -0.12 0.0 0.87 0.82 0.48 0.74 -2.39 -1.47 -1.26 -2.3 -0.89 -2.92 -0.29 -4.86 1.97 - -0.03 -0.47 0.7 0.22 0.14 -0.46 -0.89 -1.12 0.39 0.69
0.61 0.86 0.68 0.09 0.64 0.46 -0.32 1.47 0.65 0.65 1.28 0.25 -0.14 -2.35 -3.49 -1.67 -0.71 - -0.91 - 0.37 - -0.65 -0.56 -0.53 1.04 0.62 0.55 -0.91 -0.83 -1.53 -1.86
-0.39 -0.23 0.06 -0.21 -0.04 0.01 0.43 0.5 0.76 0.72 0.62 0.35 -1.0 -1.54 -0.48 -0.93 -0.67 -1.89 -0.3 -2.79 1.87 -0.83 -0.41 -0.45 1.2 -0.0 -0.66 -0.63 -0.14 -0.11 -0.51 -0.29
0.39 0.19 -0.33 0.59 0.63 0.74 0.75 0.39 0.22 0.85 -0.27 0.98 -0.04 0.35 0.51 -0.14 -1.17 -0.45 -0.5 - 1.14 - -0.85 -1.08 -1.14 0.3 0.01 0.58 -1.41 -1.34 -1.87 -1.56
0.13 0.39 0.39 -0.15 0.53 0.22 0.45 -0.12 1.33 0.7 -0.21 -0.32 -0.82 0.99 0.36 -1.05 -2.16 -0.89 -1.76 -1.32 1.6 1.12 -3.0 -3.76 0.95 -0.99 -0.63 0.5 -1.53 -1.76 -2.21 -2.85
-0.2 0.1 0.07 0.13 0.16 0.33 0.23 0.5 0.36 0.35 0.19 0.11 0.48 -0.25 -0.55 0.39 -0.59 -0.35 0.31 -2.93 0.19 -2.42 0.04 0.31 -0.02 -0.06 -0.36 -0.59 0.02 0.18 -0.1 0.09
0.6 0.17 0.08 0.3 0.04 0.0 -0.17 0.29 0.59 0.59 0.69 0.62 -0.04 -0.84 -1.37 0.12 -0.56 -1.08 -0.2 -1.65 -0.32 -0.68 -0.28 -0.27 -2.44 0.99 0.12 -0.11 -0.12 -0.11 0.2 0.22
0.22 -1.05 -1.24 -1.26 -0.18 0.27 -0.08 0.83 0.9 0.86 0.7 -0.0 0.03 -1.37 -1.48 -1.43 -1.29 0.0 -0.16 -6.58 2.17 0.97 -0.7 -0.92 -2.49 -0.76 0.52 0.45 -0.0 -0.12 -1.06 -1.37
0.26 0.66 0.15 0.45 0.47 0.52 0.4 0.29 0.27 0.72 0.31 0.43 -0.61 -0.57 0.42 -0.66 -0.79 -2.35 -0.03 -0.87 0.52 -2.45 -0.41 -0.3 0.55 -0.34 0.19 0.2 -1.07 -1.01 -0.31 -0.22
0.3 0.33 0.43 0.58 0.46 0.31 0.29 0.45 0.61 0.49 0.37 0.26 -0.59 -0.1 0.37 -0.53 -0.53 1.07 -0.32 -3.71 0.67 -4.98 -0.52 -0.92 -1.16 -0.49 -0.67 -0.54 -0.74 -0.69 -0.03 0.34
0.34 0.13 -0.61 -0.14 -0.39 0.54 1.14 0.79 1.28 0.3 1.18 0.76 -0.31 -0.79 -0.82 0.02 -2.22 -0.73 -0.6 - 1.75 -1.7 -1.51 -2.56 0.53 1.18 -1.09 -0.7 -1.53 -1.72 -3.31 -2.87
1.17 -0.17 -0.47 0.2 -1.22 -0.35 -0.73 -0.18 0.84 0.58 0.9 0.85 -1.34 -1.01 -1.63 -0.82 -0.58 -3.54 0.15 -2.31 1.89 - -0.45 -0.13 0.73 1.02 0.32 -0.74 -0.1 -0.13 -1.29 -1.62
-0.09 -0.41 0.04 -0.17 0.47 0.17 0.65 0.87 0.97 0.92 0.98 0.15 -1.85 -1.58 -2.46 -1.33 -0.58 -0.29 -0.62 -0.71 1.41 -3.9 -0.77 -0.92 -0.51 0.33 0.06 -0.49 -0.21 -0.3 0.36 0.17
0.16 0.03 -0.59 0.25 -0.0 -1.14 0.86 1.14 1.1 0.79 -2.75 0.36 - 0.5 2.23 - -4.13 2.15 -4.26 - -0.18 - -3.17 -4.32 - 0.21 0.87 1.3 -4.25 -4.25 - -
0.27 0.28 0.39 0.37 0.34 0.38 0.55 0.54 0.85 0.93 0.61 0.56 -0.71 -0.92 -0.77 -0.92 -0.76 -3.21 -0.85 -0.54 1.21 -2.04 -0.65 -0.55 -0.35 0.13 0.03 0.39 -0.83 -0.7 -0.57 -0.59
0.44 0.49 0.5 0.2 0.42 0.27 0.24 0.39 1.23 0.98 1.25 0.85 -1.22 -2.17 -1.57 -1.22 -0.99 -1.64 -0.72 -2.76 1.16 -1.27 -0.88 -2.35 -0.32 1.17 0.13 -0.54 -0.98 -0.8 -1.41 -1.07
-0.03 -0.08 0.03 -0.02 -0.04 0.07 0.35 0.56 0.57 0.77 0.61 0.49 -0.32 0.06 -0.71 -0.25 -0.63 -1.09 -0.07 -0.17 0.97 -1.6 -0.66 -0.71 0.37 0.37 -0.62 -0.86 -0.12 -0.22 -0.17 -0.12
0.3 0.17 0.12 -0.08 0.57 0.23 0.34 0.1 0.23 0.33 0.11 -0.14 -0.29 -0.45 0.06 -0.27 -0.73 0.05 -0.32 -2.88 0.13 -2.34 -0.62 -0.36 -0.81 0.43 0.39 0.35 -0.64 -0.84 1.25 0.49
0.5 0.59 0.52 0.41 0.4 0.55 0.41 0.16 0.25 0.28 0.11 0.16 -0.26 -0.21 -0.77 -0.03 -0.41 -0.21 0.01 -0.58 0.65 -1.38 -0.34 -0.32 -0.72 -0.64 -0.17 -0.24 -0.23 -0.28 -0.27 -0.18
0.39 0.6 0.76 0.6 0.59 0.59 0.6 0.72 0.66 0.63 0.29 0.43 -1.35 -0.59 -1.81 -0.93 -0.87 -2.43 -0.52 -0.72 0.98 -3.51 -0.71 -0.71 -0.51 0.15 0.71 0.25 -0.4 -0.44 -1.36 -1.48
0.49 0.39 0.17 0.1 -0.24 -0.32 0.12 0.22 0.64 0.92 0.82 0.89 -0.17 0.49 -1.04 -0.34 -1.1 -0.59 0.36 -3.66 -1.42 -5.6 -0.4 -0.21 -2.13 0.08 -0.93 -1.26 0.11 -0.1 0.88 0.96
0.4 0.41 0.36 0.47 0.28 0.3 0.08 0.56 0.59 0.76 0.51 0.44 -1.09 -0.64 0.3 -0.82 -0.96 0.4 -0.72 -3.56 0.87 - -0.59 -1.2 -1.23 0.09 0.34 -0.03 -1.46 -1.79 0.22 0.86
0.87 0.79 1.04 1.02 -0.47 0.38 0.61 1.16 1.04 1.13 1.21 0.97 -0.1 -0.37 -1.98 -1.11 -1.72 -4.41 -0.36 -0.6 0.67 -3.24 -1.31 -1.01 -3.34 -0.59 -2.01 -1.57 -0.91 -0.78 -1.71 -1.12
0.32 0.25 0.01 0.3 -0.04 0.15 -0.04 0.02 0.17 0.53 0.26 0.35 0.11 -0.06 -0.11 0.17 -0.54 -0.42 0.27 -2.87 0.88 -2.15 -0.02 0.02 -1.06 -0.27 -0.23 -0.42 -0.13 -0.1 0.2 0.47
-0.31 -0.06 -0.03 0.12 0.07 0.12 0.19 0.47 0.66 0.56 0.44 0.28 0.28 -0.45 -0.9 0.34 -0.47 -0.57 0.26 -1.02 0.46 -1.99 -0.13 0.09 -0.95 0.25 -0.89 -0.86 -0.06 -0.05 0.39 0.5
-0.03 0.05 0.13 0.24 -0.0 0.1 0.08 0.23 0.16 0.37 0.3 0.01 0.11 0.1 0.4 -0.02 -0.49 -0.42 -0.15 -1.95 0.28 -1.18 0.13 0.19 -1.22 0.15 0.2 0.16 -0.48 -0.49 0.45 0.25
0.29 0.21 0.28 0.07 0.05 0.01 0.29 0.27 0.4 0.52 0.56 0.48 -0.04 0.1 -0.13 0.13 -0.75 -1.03 0.1 -1.85 -0.08 -2.82 -0.38 -0.22 -0.51 0.95 0.01 0.1 -0.43 -0.46 -0.22 0.02
-0.15 0.25 -0.18 0.23 0.47 0.75 0.53 0.44 0.45 0.32 0.58 0.42 -0.25 -0.72 -0.33 -0.02 -0.53 -0.82 -0.33 -0.04 1.42 -1.0 -0.13 -0.43 -1.56 0.35 -0.58 -0.29 -0.69 -0.6 -1.13 -0.68
-0.49 -0.23 -0.42 -0.51 -0.43 -0.09 0.98 1.1 1.15 1.2 0.99 0.94 -2.79 -3.21 -1.61 -2.29 -1.0 -1.24 -0.91 -1.57 1.93 -4.21 -1.32 -1.55 0.26 -0.39 0.09 0.0 0.05 0.01 -0.28 -0.53
0.16 -0.11 0.11 0.17 -0.38 0.04 0.34 0.38 0.74 0.68 0.63 0.49 -0.66 -0.57 0.36 -0.65 -0.55 -0.67 -0.55 -2.67 1.34 -1.07 -0.92 -0.74 0.29 0.24 -0.36 -0.25 -0.33 -0.53 -0.13 0.3
-0.04 0.17 -0.07 0.09 0.24 0.07 0.12 0.37 0.44 0.67 0.61 0.7 0.44 -0.07 -0.6 0.39 -0.74 -0.53 0.27 -2.98 0.65 -0.95 -0.36 -0.17 -1.62 -0.22 -0.97 -1.26 0.12 0.07 0.16 0.24
0.16 0.19 0.22 0.14 0.12 0.17 0.18 0.36 0.22 0.32 0.36 0.28 0.29 -0.1 -0.25 0.35 -0.69 -0.66 -0.02 -2.46 -0.61 -3.79 -0.44 -0.26 -0.27 0.68 0.39 0.34 -0.17 -0.11 0.05 0.11
-0.08 0.13 -0.17 0.05 0.14 0.07 0.42 0.58 0.71 0.74 0.41 0.24 -0.26 -0.7 -1.62 -0.69 -0.42 -0.03 0.33 -0.55 0.41 -1.28 -0.08 -0.07 -0.48 -0.22 -0.44 0.26 -0.45 -0.51 0.33 0.41
-0.29 -0.32 0.06 0.14 -0.26 -0.12 0.16 0.5 0.74 1.09 0.84 0.53 -4.51 -5.52 -3.66 -4.34 -0.32 -3.45 -0.28 -0.56 2.18 -2.85 -0.28 -0.57 0.85 1.15 -1.13 -0.85 -0.23 -0.33 -0.3 -0.55
0.7 0.47 0.16 0.07 -0.27 -0.48 0.21 0.82 0.82 1.08 1.05 1.18 -4.97 -3.28 -6.15 -2.71 -0.77 -0.59 -0.9 -0.36 1.55 -6.67 -0.98 -1.29 0.86 -0.2 -1.08 -1.35 0.25 0.02 -0.42 -0.15
0.34 0.61 0.75 0.58 0.22 0.37 0.61 1.0 0.55 0.66 0.61 0.53 -2.53 -0.23 -1.0 -2.63 -2.32 0.5 -0.41 - 1.44 -4.28 -1.81 -1.4 0.1 0.75 -0.49 -1.43 -0.7 -1.21 -0.16 -0.37

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.