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Heatmap: Cluster_116 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
Aerial tissue - Light - ZT1
Aerial tissue - Light - ZT3
Aerial tissue - Light - ZT5
Aerial tissue - Light - ZT7
Aerial tissue - Light - ZT9
Aerial tissue - Light - ZT11
Aerial tissue - Dark - ZT1
Aerial tissue - Dark - ZT3
Aerial tissue - Dark - ZT5
Aerial tissue - Dark - ZT7
Aerial tissue - Dark - ZT9
Aerial tissue - Dark - ZT11
Roots
Root elongation and differentiation zone
Root meristematic zone
Aerial roots and rhizophores
Shoot tips
Microphyll
Strobili
Shoot apical meristem - AC
Shoot apical meristem - Core
Shoot apical meristem - P1
Stem - Top
Stem - Bottom
Whole plant
Aerial tissue - Stress - Dark
Aerial tissue - Stress - High light
Aerial tissue - Stress - Cont
Aerial tissue - Stress - 37C 1h
Aerial tissue - Stress - 37C 3h
Aerial tissue - Stress - 4C 1h
Aerial tissue - Stress - 4C 3h
0.3 0.32 -0.24 0.08 0.19 0.09 0.06 -0.35 0.27 0.46 -0.09 0.28 -0.07 -0.43 -0.0 -0.01 -0.78 -7.27 0.81 -0.16 -0.09 -0.11 -0.45 -0.31 1.12 0.65 0.19 0.52 -1.32 -0.39 -1.21 -0.75
2.61 0.83 -0.04 -1.13 -4.78 - -4.2 - -2.14 -1.52 -0.44 0.72 -1.23 - -2.55 -5.83 -3.43 2.48 -3.81 -6.62 -0.65 -7.12 -3.92 - 1.53 2.51 0.61 0.86 -3.01 - -3.22 -1.44
0.31 0.36 0.22 0.57 0.72 0.79 0.79 0.47 0.46 0.27 0.29 -0.33 -5.7 -0.07 -1.26 -0.35 -0.3 -0.56 1.31 -3.05 - -4.31 -1.44 -0.94 1.03 0.51 -0.2 -0.35 0.07 0.11 -0.34 -0.99
1.08 1.07 0.05 -0.7 -0.8 -0.78 -1.56 0.48 0.0 0.16 0.04 0.31 -4.07 -2.41 -2.87 -0.35 -1.08 -0.46 1.87 -2.41 -1.87 - -0.37 0.89 1.52 0.57 0.64 -0.23 -0.28 -0.12 -0.24 -1.32
0.14 0.6 0.15 0.35 0.68 0.73 0.37 0.81 0.52 0.44 0.35 0.24 0.15 -0.86 -1.21 -0.74 -1.03 -1.17 1.09 -4.45 -6.07 -1.04 0.24 0.2 -0.12 0.14 0.31 0.46 -0.61 -0.48 -1.23 -1.33
0.29 0.42 0.2 0.53 0.69 0.47 0.08 0.38 0.05 0.33 0.42 -0.02 -0.96 -0.39 0.53 -0.76 -0.28 - 0.95 -4.6 -1.28 -1.53 -0.3 -0.09 0.46 0.28 0.67 0.35 -0.71 -0.84 -0.55 -0.08
-0.43 -0.21 0.03 -0.02 0.29 0.18 0.13 0.24 0.2 0.34 0.34 -0.13 -0.16 -0.55 -0.57 0.13 -0.34 -0.26 1.81 -2.74 -0.84 -2.25 0.13 0.28 -0.89 -0.19 -0.23 -0.11 0.33 0.31 -0.2 -0.17
1.23 1.62 1.17 0.71 1.07 -0.55 -0.9 0.15 -0.68 -0.29 -0.32 0.67 -8.74 -4.54 -4.89 -4.57 -2.3 -6.97 1.63 0.06 -2.18 - -1.48 -0.69 2.22 0.99 -0.53 -0.46 -1.69 -2.32 -3.13 -3.74
-0.68 -0.65 -0.65 -0.39 0.1 0.15 0.13 0.36 0.4 -0.05 -0.43 -0.56 -1.11 -1.74 0.34 -0.33 -0.04 -0.12 0.95 -0.7 -1.9 -1.47 -0.01 0.04 0.44 0.98 0.97 1.19 0.28 0.52 -0.79 -1.47
-0.49 0.83 0.85 1.24 1.1 1.21 1.05 1.04 0.24 -0.18 -0.28 -0.15 -4.41 -2.04 -1.7 -6.04 -3.35 -4.02 2.48 -1.32 1.03 -1.8 -3.14 -4.82 1.34 -1.62 -1.36 -2.47 -4.34 -3.32 -3.52 -3.67
-0.9 -0.12 0.2 0.55 0.85 0.55 0.24 0.02 -0.11 -0.17 -0.26 -0.52 -0.43 0.02 -1.34 0.26 -0.56 -1.07 1.76 -4.97 0.3 -2.81 -0.7 -0.38 1.33 0.01 0.39 0.33 -0.5 -0.54 -1.17 -1.0
0.4 0.64 0.5 0.55 -0.41 -0.37 -0.02 -0.02 0.31 0.31 0.46 0.69 -2.37 -0.59 0.07 -1.77 0.55 0.02 0.74 0.19 1.35 -2.27 -1.71 -0.78 0.46 0.78 -1.04 -1.18 -0.76 -0.89 -0.98 -1.02
1.26 1.01 0.61 -0.04 -0.47 -0.87 -1.06 -0.46 -0.83 -0.63 -0.24 0.4 -2.87 -2.31 -2.68 -2.58 -0.85 0.6 2.43 -1.8 -1.09 -2.0 -0.87 -0.88 -0.68 1.49 0.23 0.12 0.06 -0.19 -0.11 -1.02
-0.49 -0.16 -0.06 -0.02 0.15 0.17 -0.03 0.12 -0.22 -0.15 -0.5 -0.5 0.49 1.01 0.16 -0.03 -0.84 -0.97 1.41 -1.04 -0.39 -1.46 -0.62 -0.29 1.32 0.31 0.44 0.54 -0.79 -0.72 -1.15 -1.13
0.36 0.43 0.58 0.57 0.9 0.56 -0.24 0.29 0.27 0.19 -0.18 -0.64 -2.18 -2.84 -2.84 -1.31 0.03 -0.42 1.24 -4.93 -2.52 -4.31 0.61 0.81 -2.04 0.38 0.67 0.58 -0.34 -0.41 0.01 0.45
0.25 0.38 0.36 0.66 0.87 0.11 0.19 -0.03 -0.41 0.55 -0.21 0.1 -1.1 0.24 0.3 -1.38 -1.73 -1.92 1.22 - 0.8 -5.75 -1.34 -1.5 -2.06 0.82 1.44 1.39 -1.48 -1.67 -1.42 -1.25
-0.46 -0.72 -0.95 -0.33 -0.15 0.15 0.71 0.31 0.31 0.58 0.32 -0.48 -1.11 -0.71 0.13 -0.25 -1.1 -1.28 1.68 - - - -0.97 -1.47 -0.01 1.0 1.68 1.43 -0.4 -0.26 -0.61 -0.56
-0.02 -0.56 0.13 -0.48 -0.01 -0.11 -0.48 -0.83 -0.98 -0.61 -0.64 -0.79 -1.31 1.57 0.32 0.11 -0.5 -0.25 2.17 -2.32 -1.8 - 1.19 -0.99 -5.95 -1.9 -0.96 -1.86 0.39 0.84 1.02 0.78
0.65 0.66 0.38 -0.23 -0.28 -0.08 -0.92 -0.13 -0.03 0.23 0.07 0.26 0.63 -0.09 -1.11 -0.2 -1.12 - 1.43 -2.49 -3.33 -3.07 -0.22 0.18 0.18 1.2 0.03 0.14 0.28 0.19 -0.03 -0.27
0.14 -0.38 -0.48 0.09 -0.49 0.04 0.1 0.38 0.72 0.76 0.64 0.4 -0.16 0.3 -0.0 0.19 -0.18 -0.17 0.53 -1.13 -2.51 -1.05 -0.14 -0.06 -0.9 0.46 -0.6 -0.44 -0.03 0.22 -0.1 0.2
-0.37 0.36 0.6 0.67 0.89 0.81 0.53 0.61 0.11 -0.18 -0.3 -0.62 -1.95 0.82 0.09 0.64 -0.72 -3.82 0.9 0.14 0.5 -1.59 -2.96 -1.7 1.12 0.29 -0.31 -1.65 -0.67 -1.16 -0.81 -2.2
-2.3 -0.29 0.75 1.11 1.51 1.05 0.74 0.37 -0.4 -1.27 -1.78 -2.37 -5.65 -6.0 -4.46 -5.3 -1.06 -2.86 2.76 -8.32 -3.98 - -0.28 -1.7 -0.32 0.61 1.2 1.69 -1.68 -1.84 -2.74 -1.74
0.29 0.23 0.63 0.44 0.69 0.49 0.05 0.01 0.11 0.29 0.25 0.07 -0.96 -0.48 -0.88 -0.62 -0.09 -0.8 1.7 -1.69 -1.75 -1.56 -1.03 -1.1 -1.83 0.85 1.05 0.72 -1.08 -0.97 -0.61 -0.79
0.7 0.74 0.86 0.37 1.17 0.69 0.19 0.12 0.03 -0.21 0.48 0.25 -7.84 - -5.06 -3.15 0.59 0.04 1.84 - - - -0.14 -0.7 -1.32 -0.17 -0.99 0.2 -0.06 0.26 0.26 -0.06
-0.94 0.44 0.48 0.2 1.18 0.16 0.62 0.64 0.55 0.46 -0.57 -1.29 -0.78 -2.35 -2.1 -0.3 0.02 -0.35 2.57 - - - -0.18 -0.52 -3.17 -1.84 -1.57 -1.0 0.85 0.66 -0.63 -0.28
-0.66 0.11 0.39 0.82 0.9 0.89 0.65 0.32 0.19 0.13 0.01 -0.28 -3.87 -3.6 -0.63 -1.12 -0.02 -1.4 1.74 -6.16 -3.3 -5.73 -0.14 -0.26 -0.84 0.96 0.64 1.18 -0.13 -0.18 -1.15 -2.28
-0.13 -0.12 0.33 0.11 0.97 1.35 0.67 0.22 0.28 -0.85 -0.51 -0.29 -2.85 0.02 -0.77 -2.16 -2.27 -0.79 2.08 - - - -1.14 -1.83 -3.15 1.56 1.94 0.81 -2.31 -2.2 -1.95 -2.24
-0.02 0.33 -0.11 0.51 0.44 0.9 0.05 0.36 0.03 0.2 0.03 -0.04 0.01 -0.83 -1.37 -0.07 -0.18 -1.0 1.0 -2.38 -0.96 -1.14 -0.36 -0.28 -1.2 0.61 0.92 0.58 -0.33 -0.39 -0.67 0.14
0.58 0.25 0.18 -0.07 -0.12 -0.08 -0.21 -0.28 -0.06 0.26 0.1 0.15 -0.82 -0.12 -1.34 0.04 -0.5 0.47 1.63 -1.33 -0.25 -2.5 0.48 -0.52 -0.94 -0.54 -0.23 -0.71 0.22 0.36 0.38 0.4
0.87 0.29 0.13 0.23 0.09 0.24 -0.55 0.39 0.65 0.77 0.29 0.28 -0.4 -0.49 -1.11 -0.23 -1.16 -1.74 1.58 -1.93 -0.79 -0.16 -0.52 -0.38 -0.18 0.97 -0.12 -0.82 -1.29 -0.98 -0.29 -0.08
0.44 1.12 1.66 1.29 0.57 0.53 1.26 -0.53 -0.93 -0.87 -0.96 -0.33 -4.96 -7.72 -6.1 -3.82 0.32 -0.93 -0.4 0.59 0.72 -5.94 -0.2 0.42 -1.8 1.33 -0.93 -0.8 -0.27 -0.48 -0.44 -1.97
-0.78 -1.58 -0.83 -0.33 0.66 0.57 0.24 0.77 1.19 0.89 0.59 0.54 -4.16 -4.18 -0.35 -4.16 -0.04 -1.39 1.63 - - - -1.93 -1.47 0.03 1.07 0.93 1.03 0.06 0.73 -0.77 -1.84
0.25 -1.35 1.03 0.05 0.03 1.15 -0.0 0.9 0.73 0.09 -0.11 -0.3 -3.97 -3.11 -4.86 - -0.43 - 2.48 - - - 0.14 0.69 -0.31 -0.54 0.7 1.39 -1.95 0.16 -3.16 -1.64
-0.21 -0.07 -0.07 -0.26 0.77 0.06 -0.1 0.41 0.32 -0.34 -0.09 -0.13 -1.59 -0.18 0.36 -1.39 -0.2 0.53 1.04 -3.52 -3.66 - -0.38 -0.93 -2.85 1.13 1.43 1.69 -0.25 -0.42 -1.26 -0.99
- - - - - - - - - - - - - 2.18 - 2.55 - - 3.39 - - - 2.53 - - - - - - 2.41 - -
-1.08 0.01 -0.26 0.09 -0.58 0.06 0.26 0.93 1.26 0.81 -0.02 1.1 -0.4 -1.27 -0.84 -0.61 -1.82 -1.62 0.98 - - - -0.65 -0.83 -0.1 1.3 0.73 1.25 -0.81 -0.17 -0.37 -0.51
-0.36 -0.62 -0.62 -0.15 0.37 0.34 1.34 1.16 1.05 0.73 1.01 0.23 -5.07 -4.61 -1.9 -5.9 0.84 -0.86 0.96 -1.98 - -3.08 -1.14 -2.52 -0.11 0.48 0.18 0.72 0.41 0.47 -0.63 -0.58
-1.72 -0.52 0.38 -0.13 -0.24 0.75 0.71 0.11 0.63 -0.4 -0.17 -0.39 -3.33 -0.92 1.02 -2.12 -1.56 -3.92 1.52 -4.07 -3.93 - -0.12 -0.96 -3.63 0.83 2.27 1.9 -1.01 -1.45 -1.34 -2.22
-0.61 -0.93 -0.4 -0.86 -0.19 0.12 0.4 0.6 0.18 0.3 -0.54 -0.8 -1.58 -0.38 1.01 -1.36 -1.04 -0.46 1.53 -1.7 - -2.94 0.34 0.78 -1.13 0.21 1.2 1.83 -0.35 -0.33 -1.15 -0.82
-0.73 -0.7 0.42 0.28 0.14 0.17 -0.28 0.02 -0.09 -0.52 -0.52 -0.24 -1.58 -3.29 -1.7 -0.18 -0.77 0.49 1.89 -1.5 -2.58 - 0.69 0.88 0.84 0.26 1.05 1.28 -0.08 -0.62 -1.34 -2.34
0.7 0.85 0.79 0.69 0.52 0.6 0.62 0.23 0.58 0.61 0.64 0.64 -6.5 -7.49 -4.72 -3.93 0.71 0.29 1.55 -2.57 -2.18 0.37 -1.73 -1.94 -3.39 -1.04 -1.22 -0.5 -0.04 0.17 -0.1 -0.88
0.19 0.64 1.12 1.33 -0.02 0.6 -0.33 -0.07 0.43 -0.98 0.15 -1.18 -3.03 -2.29 -5.44 -1.55 -1.15 -1.41 0.76 -0.38 -0.44 - -0.06 -0.19 0.2 2.12 0.86 1.08 -1.46 -1.94 -3.19 -2.04
-0.18 0.08 0.65 0.28 1.1 0.95 0.59 -0.35 0.75 0.36 -0.2 -0.24 -4.99 - -5.2 -3.92 -0.71 -0.56 2.17 - - - 0.41 -0.42 -1.02 0.56 1.51 0.07 -0.11 -0.54 -1.61 -1.17
-0.13 0.48 0.42 0.5 0.35 0.2 0.13 -0.1 -0.15 -0.09 -0.23 -0.24 -0.36 0.65 0.39 0.27 -0.42 -0.36 0.23 -0.46 0.7 -2.2 -0.1 -0.29 0.89 0.05 -0.09 0.26 -0.68 -0.5 -1.55 -1.51
0.04 0.73 0.64 0.54 0.75 -0.39 -0.22 0.49 0.16 0.38 0.14 0.72 - -6.27 -5.11 -4.61 -2.73 -3.84 1.74 -6.73 -0.3 -7.38 -0.22 0.3 2.32 0.89 0.12 -0.04 -2.07 -2.21 -2.04 -1.9
0.5 0.39 0.76 0.7 0.62 0.38 -0.08 -0.24 -0.15 0.54 -0.36 0.05 -1.32 0.19 -0.82 -1.18 -0.62 -1.47 0.8 - -1.3 -2.06 -1.06 -1.1 0.2 0.91 1.23 1.35 -1.31 -0.5 -0.97 -0.49
-1.04 -1.42 -0.8 - -0.91 -0.13 0.66 -0.35 -0.44 -1.21 - - -1.42 1.65 0.41 -0.4 - -0.58 2.5 - -0.26 - -2.26 -2.4 2.22 1.66 -0.06 1.09 -0.22 -0.57 - -
0.02 0.16 -0.07 0.36 0.22 0.38 0.46 0.06 0.46 0.34 0.22 0.0 -1.72 -1.81 0.5 -0.44 0.54 -0.59 0.76 -4.95 0.52 -2.84 0.09 -0.09 -1.04 -0.36 0.41 0.76 0.05 0.32 -0.6 -0.89
0.05 0.18 0.13 0.09 0.22 0.26 -0.26 -0.19 -0.09 -0.25 -0.33 -0.42 -0.18 -1.47 -1.29 0.31 -0.74 -0.74 0.61 0.2 -1.18 -0.34 0.38 0.71 -0.84 1.31 0.87 1.19 -0.64 -0.52 -1.31 -1.15
-0.41 0.16 0.67 0.43 0.54 0.17 0.17 0.15 0.21 -0.21 -0.18 -0.38 0.04 0.03 -0.78 0.19 -0.19 -0.7 0.9 -7.73 0.77 -2.86 -0.23 -0.38 0.34 -0.2 0.53 0.6 -0.51 -0.61 -0.45 -0.12
0.01 0.53 0.61 0.67 0.84 0.69 0.18 -0.02 -0.03 -0.24 -0.41 -0.46 -2.43 -2.28 -1.39 -0.1 -0.19 -0.5 0.82 -0.12 -0.3 -1.29 -0.53 -0.68 0.21 1.23 0.71 0.95 -0.73 -0.7 -1.42 -1.19
0.79 0.21 0.15 -0.08 0.18 -0.1 0.27 0.27 0.23 0.26 0.34 0.16 -3.15 -1.18 -1.64 -1.96 0.06 0.93 0.91 -0.46 -0.71 -0.06 -0.85 -1.02 -0.31 0.96 -0.55 -0.19 0.38 0.34 0.02 -0.61
-0.31 0.69 0.92 0.99 0.68 0.59 0.37 0.66 0.96 0.82 0.84 0.42 0.52 -0.71 -5.4 -0.08 -0.89 -1.27 1.6 - -1.79 -8.28 -0.86 -1.93 0.43 0.1 -0.94 -0.68 -1.12 -1.22 -2.66 -2.54
-0.56 0.04 0.2 0.1 0.77 0.49 0.51 0.23 -0.18 -0.29 0.0 -0.18 -3.39 -0.66 0.6 -3.11 -1.55 - 1.97 -4.67 - -1.44 -1.8 -1.6 -3.5 1.26 1.88 1.83 -1.38 -1.57 -1.7 -1.26
0.19 0.46 0.27 0.43 -0.11 0.19 0.33 -0.08 0.36 0.33 0.31 0.38 -3.25 -3.31 -3.47 -3.51 0.74 1.11 1.16 -0.0 -1.83 -0.04 -1.25 -2.0 0.01 0.25 -0.86 -0.74 0.56 0.14 0.21 0.16
-0.27 -0.34 -0.36 -0.21 0.23 0.16 0.45 0.56 0.61 0.32 0.37 0.12 -1.51 -1.27 -0.37 -0.97 0.02 -0.41 0.84 -0.21 -0.97 -1.38 -0.11 -0.1 0.74 0.25 0.25 0.34 0.16 0.26 -0.35 -0.31
0.97 1.17 -0.63 0.16 -0.73 -0.02 -0.84 -1.16 -2.29 -1.34 -1.84 -0.11 -3.74 -5.14 -1.25 -4.9 -0.28 -0.59 0.46 -0.87 -1.86 -1.27 0.46 0.16 1.37 1.33 1.0 2.12 0.09 0.04 -0.86 -1.37
0.41 0.24 0.33 0.25 0.29 0.43 0.33 -0.43 -0.14 0.55 0.24 -0.18 -1.14 -3.47 0.82 -1.64 0.55 -0.77 1.9 -0.37 0.5 -2.79 -1.14 -1.75 -2.47 0.07 -0.1 -0.12 -0.27 0.25 -0.65 -0.31
0.12 0.35 0.27 0.96 0.77 0.86 0.54 0.04 0.49 0.16 -0.13 0.12 -2.72 -4.42 -1.2 -0.75 0.1 -0.6 2.41 -3.27 -1.51 -0.78 0.2 0.05 -0.93 -1.04 -1.4 -1.34 0.07 -0.12 -1.05 -2.26
-0.13 -0.04 0.15 0.16 0.68 0.53 0.18 0.17 0.4 0.67 0.86 0.61 -2.0 -0.55 -0.04 -1.11 -0.07 -0.99 1.74 - -0.92 - 0.04 -0.26 -1.46 0.47 -0.17 -0.09 -0.01 0.2 -0.77 -1.11
0.19 -0.19 0.11 0.03 -0.07 0.2 0.34 0.46 0.7 0.48 0.76 0.5 -0.42 -0.34 -0.85 -0.35 -0.51 -1.66 1.75 -3.03 -0.6 -1.62 -0.28 -0.2 -0.44 0.6 -0.03 -0.04 -0.28 -0.34 -0.68 -0.96
0.01 0.21 0.19 0.5 0.7 0.78 0.54 0.52 0.49 0.4 0.27 0.07 -2.07 -0.99 -1.37 -0.88 0.21 -0.21 0.92 -3.76 -1.07 -1.47 -0.17 -0.51 -1.14 0.53 0.49 0.73 0.04 0.01 -0.86 -1.19
0.41 -0.25 -0.25 -0.09 -0.09 0.35 0.21 0.36 0.89 0.9 0.88 0.71 -1.07 -0.85 -1.18 -0.22 -0.98 -0.85 1.32 -1.5 -4.04 -4.5 -0.25 0.14 -0.53 -0.23 0.04 0.19 -0.03 0.29 -0.17 0.15
1.2 0.64 -0.69 -0.87 -0.7 -0.7 -0.87 -0.35 0.13 -0.11 0.25 0.65 -0.47 -0.83 -1.47 0.28 -1.33 -3.22 1.57 -3.06 -1.3 -6.66 -1.04 -1.31 0.83 0.62 0.85 0.47 0.23 0.24 0.69 0.49
-0.23 0.46 0.13 0.54 0.81 0.62 0.56 0.42 0.17 0.15 0.11 0.04 0.0 -1.65 -0.61 -0.65 -0.71 -1.88 0.96 -3.21 -1.05 -0.77 0.4 -0.37 -0.5 0.87 0.37 0.76 -0.26 -0.41 -0.69 -1.52
0.66 0.58 0.55 0.47 0.26 0.01 0.23 0.04 -0.03 -0.07 0.02 -0.13 -1.34 -2.94 -3.55 -1.42 0.47 0.63 1.34 - -5.05 -1.77 -0.27 -0.25 -0.4 -0.03 0.09 -0.12 -0.07 0.01 1.14 0.55
0.55 0.68 1.53 0.87 0.8 0.29 0.79 -0.54 -0.58 0.09 -0.42 -0.32 -6.6 -2.14 -5.44 -2.51 0.32 0.16 0.91 -1.25 - - 1.02 0.65 - 0.93 -1.92 -2.91 0.0 0.06 0.72 -0.19
0.26 0.17 -0.05 0.1 -0.08 -0.36 -0.14 0.1 0.05 0.02 0.01 0.24 -2.25 0.27 -0.53 0.6 -0.42 -0.16 1.29 -3.62 -0.6 -2.39 -0.32 -0.36 -0.24 0.49 0.27 0.0 0.12 0.1 0.55 0.47

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.