Heatmap: Cluster_122 (HCCA cluster)

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Gene
Light - ZT1
Light - ZT3
Light - ZT5
Light - ZT7
Light - ZT9
Light - ZT11
Light - ZT13
Light - ZT15
Dark - ZT17
Dark - ZT19
Dark - ZT21
Dark - ZT23
Light - ZT25
Nutrient stress - Low nitrogen - 10%
Nutrient stress - Low phosphate - 0%
Nutrient stress - Low sulfate - 2%
Nutrient stress - Low micronutrients - 0%
Nutrient stress - NaCl - 75 mM
Nutrient stress - Mannitol - 100 mM
Nutrient stress - Control
Environmental stress - Prolonged darkness - 72h
Environmental stress - Cold - 4C
Environmental stress - Heat - 37C
Environmental stress - Control
Environmental stress - High light - 150 uE
Environmental stress - Control high light - 40 uE
186.11 226.44 304.05 361.48 245.96 125.59 142.37 157.28 52.41 91.34 120.84 140.18 327.64 106.82 133.71 89.21 463.99 72.01 51.34 50.75 36.38 212.18 100.66 86.19 258.5 179.48
45.86 30.48 26.75 55.69 30.76 13.17 16.05 21.8 7.03 14.04 17.87 18.58 59.87 1.92 2.31 2.26 27.68 4.07 4.59 3.0 0.57 3.54 7.33 4.41 5.98 4.64
205.81 331.01 383.03 502.21 348.48 215.04 218.34 311.49 234.61 148.14 149.64 140.94 216.3 34.1 56.83 26.66 53.05 70.78 77.04 149.93 2.13 47.9 8.43 9.02 116.56 103.48
781.06 678.93 864.63 889.51 501.99 155.45 159.98 359.15 84.55 30.81 56.04 90.24 653.42 13.78 33.8 19.93 66.8 47.89 44.24 155.92 10.51 28.34 6.13 30.08 411.95 637.3
4.42 2.57 1.83 4.01 3.1 1.79 1.63 2.27 1.99 1.64 3.43 3.41 6.67 0.6 0.46 0.87 1.66 0.58 0.63 0.53 0.03 0.42 1.73 1.04 2.79 1.04
695.89 394.52 510.31 479.03 144.98 60.14 135.12 268.63 24.58 48.22 64.07 104.76 926.5 6.57 18.96 7.31 19.52 49.01 43.6 103.45 26.13 3.78 10.34 20.73 244.64 235.6
2.44 2.26 2.82 3.47 1.43 2.02 1.39 1.68 1.8 2.28 3.74 3.79 3.56 1.15 1.18 1.37 4.64 1.27 1.21 0.95 1.02 0.46 1.83 1.66 1.06 1.78
305.7 248.09 238.14 452.09 333.93 129.7 92.37 93.97 22.24 55.46 63.18 72.96 563.28 12.32 5.29 70.66 329.03 6.08 5.17 2.68 1.62 6.61 6.46 2.69 13.58 13.37
371.13 393.96 534.49 503.38 371.43 284.0 177.01 174.04 88.32 96.74 128.66 158.61 450.64 100.96 83.33 104.29 1165.9 67.67 80.57 70.7 7.38 104.95 19.66 27.0 190.2 116.66
27.03 19.45 19.13 33.82 19.28 7.09 10.15 11.42 7.51 8.98 12.43 12.3 45.95 2.4 2.11 2.8 15.33 4.53 2.8 1.65 0.74 3.07 3.71 2.7 4.52 4.08
233.09 274.43 331.76 357.59 357.98 243.99 140.08 127.89 88.91 123.85 185.25 236.56 234.5 49.82 79.73 93.92 159.13 151.84 130.97 236.1 42.73 127.06 43.44 147.56 111.95 194.87
3203.46 3783.8 5629.05 5866.88 3767.83 1708.51 1437.43 2701.44 1361.5 340.64 505.75 642.49 2625.51 126.05 177.39 116.5 184.33 449.64 398.66 1907.63 113.69 1238.0 54.24 325.12 3112.17 4416.0
488.81 557.4 628.19 576.43 449.77 320.57 350.0 439.0 420.99 254.79 273.83 303.67 418.32 226.92 240.99 231.55 283.76 262.05 238.48 390.66 122.89 332.81 144.71 181.08 397.78 373.16
31.61 33.15 34.37 38.94 24.86 15.47 23.25 21.61 20.93 29.56 32.75 27.77 54.65 21.99 32.57 19.09 81.25 19.05 10.03 11.23 5.6 52.75 9.48 18.42 44.59 26.8
346.47 496.95 489.35 450.99 478.97 382.18 233.24 210.68 212.28 237.36 284.27 328.9 400.32 107.46 195.07 130.44 276.62 200.98 233.85 385.13 92.85 526.79 120.77 302.47 256.72 193.51
589.58 585.14 559.48 560.38 246.52 74.38 128.37 245.84 47.69 98.62 129.3 174.34 672.53 14.11 21.45 16.42 36.49 81.73 63.83 189.43 12.93 57.75 12.36 31.6 213.52 225.07
19.74 0.48 0.41 0.65 1.05 2.73 17.29 32.55 2.09 1.07 0.9 0.09 55.18 59.72 17.32 18.39 62.25 24.54 20.3 19.49 0.31 0.63 23.32 0.33 76.21 47.17
11.19 15.41 18.82 19.9 17.08 13.78 12.76 11.61 5.99 8.26 8.79 10.61 16.1 3.15 2.84 3.03 19.03 5.91 4.18 3.59 0.56 3.92 4.24 2.71 8.63 5.51
994.66 1074.68 1268.63 1551.38 634.19 155.7 309.35 759.34 55.42 26.93 47.86 85.0 978.85 19.95 12.84 17.61 12.13 35.61 36.45 271.5 117.3 60.87 5.28 46.47 786.76 944.18
627.92 895.91 1023.81 1036.26 810.64 594.31 684.36 854.8 891.59 575.31 501.1 456.83 502.11 241.21 424.55 248.24 459.77 655.28 536.3 957.19 132.12 631.58 271.32 355.03 795.25 836.72
19.02 7.75 8.2 7.13 5.48 5.34 13.33 15.49 6.85 9.95 8.21 8.7 28.0 18.26 11.83 16.52 42.75 10.92 10.66 10.11 1.24 6.64 3.13 3.92 28.41 10.19
217.49 249.2 289.16 321.59 221.06 141.14 164.74 193.76 49.61 57.49 54.68 53.87 244.53 40.82 53.52 40.7 56.86 96.29 79.8 124.0 18.03 224.78 28.87 48.67 258.43 263.98
149.87 243.52 266.8 245.89 163.5 98.68 82.4 121.2 115.39 75.86 76.3 79.78 115.2 55.12 50.94 51.16 58.13 67.84 74.3 129.66 33.44 154.85 58.61 69.49 146.14 213.9
625.04 497.93 430.76 495.25 261.58 98.33 145.03 242.41 53.17 109.24 147.61 169.61 704.92 33.82 29.13 26.72 48.42 89.45 66.45 176.18 59.09 116.91 27.62 70.68 230.68 222.07
222.7 242.4 263.24 239.9 167.66 95.08 83.33 146.28 139.7 100.85 132.95 172.31 217.2 21.56 85.16 34.65 61.02 75.63 61.14 151.22 24.73 116.63 48.05 79.92 129.83 146.88
129.31 130.45 175.66 155.18 87.79 44.44 45.67 92.79 60.84 29.13 33.08 34.03 123.61 30.46 53.02 31.35 33.04 57.66 53.19 84.66 10.53 49.58 13.55 26.44 129.67 142.6
659.05 1107.37 1231.71 1222.23 754.79 462.36 506.82 722.8 348.26 212.88 207.13 214.11 613.3 75.24 167.61 72.24 161.48 426.47 337.83 610.26 95.51 208.42 44.59 132.39 733.11 866.89
812.24 988.23 1384.2 1326.59 739.64 297.96 423.52 783.22 344.45 158.02 230.63 254.57 758.67 44.7 144.19 58.83 188.96 298.47 216.17 632.02 19.58 86.77 18.78 78.92 585.13 738.61
245.22 271.71 271.42 220.68 97.09 36.46 48.46 113.38 61.24 46.91 64.6 89.89 243.19 31.93 49.5 32.42 55.84 70.64 58.94 112.4 17.34 30.39 19.34 40.98 114.46 143.13
0.53 0.86 1.13 2.03 0.63 0.42 0.49 0.18 0.4 0.2 0.61 0.73 1.34 0.06 0.02 0.07 0.34 0.0 0.04 0.0 0.26 0.03 0.02 0.03 0.03 0.06
1363.2 979.56 1116.3 910.02 282.88 90.23 203.2 448.81 22.76 30.14 48.75 83.35 1430.18 20.67 37.07 20.08 30.32 56.2 54.11 249.45 25.22 11.54 4.65 28.75 465.03 653.0
5613.51 6363.62 8205.04 8796.0 8825.34 6385.66 4215.08 3710.8 3548.25 4197.84 5996.65 7079.73 6443.39 653.75 1771.58 773.31 4808.7 3520.06 2740.34 5237.26 376.3 4564.25 1845.32 3866.65 1662.89 4093.32
34.66 29.67 31.79 38.49 24.55 8.86 11.16 13.57 8.54 17.77 27.11 31.53 67.01 2.72 1.77 2.56 45.21 3.52 2.36 2.24 2.55 11.25 7.46 5.81 10.86 8.33
803.51 525.88 638.37 675.19 634.6 522.41 518.6 526.46 152.85 271.0 311.89 341.01 1842.47 4.2 6.38 7.0 818.08 15.98 14.27 10.58 0.08 5.97 3.81 4.86 21.09 18.22
7.97 6.43 6.57 8.96 7.01 4.09 3.81 3.42 1.59 2.37 3.89 5.4 10.78 0.4 0.91 0.72 10.4 1.27 0.8 0.65 0.98 0.93 3.36 3.04 1.64 1.55
124.45 92.61 103.17 120.47 85.8 50.81 40.46 41.12 11.96 23.2 29.67 34.53 184.93 0.94 0.51 1.1 73.33 1.36 0.6 1.11 0.21 0.11 0.94 0.11 1.03 2.15
50.02 34.6 43.74 50.89 29.02 16.03 14.27 14.59 3.99 8.14 11.15 12.9 87.12 0.84 1.01 2.76 41.44 1.27 0.7 0.72 0.52 0.59 2.46 0.94 5.53 2.69
3766.21 3488.62 3663.39 4974.5 2383.25 759.25 1055.87 2026.29 116.69 186.94 323.2 552.75 3858.4 42.74 60.22 39.36 71.64 161.17 178.55 745.49 743.63 969.44 208.97 643.06 2972.66 3248.5
5.89 14.13 19.34 20.5 16.5 11.07 10.69 11.81 9.17 8.21 8.51 7.73 4.36 6.82 4.54 5.57 3.78 3.92 4.48 7.28 0.12 4.09 2.62 4.2 9.3 15.44
231.03 224.99 345.79 408.14 234.39 108.54 137.95 182.98 15.88 28.05 37.96 54.38 265.34 34.93 20.28 27.0 23.73 29.77 35.29 99.16 64.69 170.46 18.62 41.66 256.13 273.7
591.93 929.42 1258.67 1364.09 1342.21 1122.49 721.22 674.75 451.67 501.64 569.17 631.8 611.23 153.29 257.6 184.83 696.06 537.19 437.61 600.12 69.86 476.53 94.02 417.78 317.15 478.2
126.94 126.08 168.74 177.46 177.69 156.52 114.21 107.54 116.91 138.32 153.42 171.23 130.64 60.55 97.33 102.57 229.35 178.62 166.61 145.95 82.86 115.07 161.32 188.21 74.87 104.93
3640.79 4528.52 4822.68 4268.92 2469.61 1177.21 993.14 2158.73 1403.82 638.2 880.31 1062.2 2920.7 283.39 647.19 308.75 825.43 1415.26 1340.84 2956.57 246.26 1069.98 107.81 375.3 2220.38 2950.93
2939.37 3692.72 4198.12 3646.39 2048.58 653.03 869.51 1902.51 1171.03 555.02 795.55 920.22 2537.93 243.4 538.38 268.84 744.03 1259.22 775.05 2535.04 190.51 884.92 82.36 306.86 1692.99 2262.32
22.71 30.28 36.5 33.65 16.43 11.83 21.43 23.78 3.55 2.49 1.99 1.19 33.94 6.56 8.9 7.34 11.6 11.77 11.24 11.11 4.16 6.98 2.25 1.1 21.87 18.74
23.12 20.81 24.41 25.12 26.25 17.09 23.13 24.7 19.26 19.15 18.93 19.37 31.04 12.45 11.11 14.24 30.06 20.08 11.98 14.32 3.63 16.85 11.97 19.37 34.36 12.47
604.74 872.31 1012.93 1542.49 1586.84 860.44 266.67 194.77 209.11 380.85 618.49 875.59 626.0 82.72 83.87 73.45 180.75 292.27 162.18 440.24 65.17 346.87 329.91 490.21 341.22 509.19
50.25 64.73 74.98 85.96 70.7 61.28 57.24 62.12 55.67 45.94 47.84 51.79 61.65 46.01 54.46 48.36 135.13 68.64 72.24 60.39 15.05 54.9 68.98 39.14 51.35 51.7
1622.4 1093.07 1010.07 1079.94 292.61 107.01 199.99 567.31 139.57 70.78 135.02 247.83 1712.23 26.34 26.09 21.22 29.06 36.69 43.55 202.17 50.2 110.87 11.4 72.51 522.95 682.12
1261.85 2002.59 1987.28 1657.75 1003.75 468.01 555.28 949.97 839.41 513.69 563.2 654.13 1276.71 205.17 446.64 199.9 428.04 634.78 593.26 1324.64 163.3 688.6 87.6 310.89 1394.84 1665.5
1080.51 1484.48 1680.8 1546.27 1162.44 616.28 601.15 862.01 973.34 741.42 789.0 865.42 1006.92 136.77 390.91 214.18 465.83 672.36 509.6 1093.4 235.47 1319.94 192.77 480.31 849.48 1071.68
10.45 27.15 36.06 36.11 23.63 13.72 15.57 15.72 14.01 12.8 13.43 19.42 11.08 11.75 10.42 14.17 8.91 11.51 11.7 11.9 0.33 8.36 5.06 5.75 20.02 14.94
94.65 648.6 921.29 1131.19 909.55 597.41 307.11 222.29 182.48 110.4 108.58 133.57 52.34 45.26 131.02 91.13 226.33 318.92 287.81 312.29 2.45 232.98 2.15 19.65 52.95 56.18
183.49 271.47 285.6 357.13 269.67 129.69 83.65 128.83 114.4 106.91 149.06 172.78 171.08 18.63 56.22 20.0 127.39 101.66 97.62 148.74 4.56 154.38 26.21 75.18 101.81 122.78
16.87 11.92 14.7 12.09 8.09 8.51 10.36 10.76 8.09 9.63 11.77 12.16 37.27 1.84 51.53 1.83 33.7 3.75 3.56 3.17 3.46 26.74 10.92 5.68 24.53 14.39
1383.76 2382.19 2397.0 2377.27 1882.16 935.87 533.25 770.16 466.17 250.12 376.45 528.9 1309.93 130.25 377.48 133.27 535.17 782.08 526.64 1289.28 8.71 178.79 105.95 103.4 506.47 567.9
682.65 814.08 862.37 1057.95 874.87 441.95 170.61 221.0 161.45 182.49 316.92 475.79 603.69 26.66 49.26 23.5 103.27 181.96 120.73 298.9 130.38 922.33 189.34 627.33 507.2 442.23
70.0 76.2 115.79 150.23 101.3 58.91 45.35 61.97 18.49 18.86 21.12 27.85 77.24 5.76 5.72 7.34 9.48 11.0 8.23 26.87 12.78 37.79 9.09 19.99 82.53 111.17
1.59 3.21 3.83 4.99 2.86 1.14 2.2 2.48 2.37 3.5 3.57 3.08 4.85 2.96 1.98 2.42 5.9 2.8 1.97 1.78 0.91 0.86 0.4 0.49 1.68 1.57
494.98 633.74 635.2 584.43 316.26 180.44 236.6 384.21 235.08 220.76 241.68 270.89 499.19 67.41 91.91 56.69 134.9 286.72 189.36 367.23 9.47 88.31 18.86 94.0 361.15 525.36
1574.41 2470.03 2697.34 2323.22 1461.84 799.95 783.95 1134.36 911.91 487.61 523.03 614.51 1425.16 211.63 355.56 705.25 506.23 631.48 609.37 1423.9 110.09 443.2 178.87 243.95 689.25 862.59
912.57 597.26 663.2 850.94 355.54 123.99 248.01 537.31 41.64 30.16 42.75 64.38 989.66 16.39 27.9 25.83 20.44 44.43 35.75 170.75 18.3 32.41 4.02 20.1 311.65 325.7
766.55 652.53 766.16 962.31 394.32 137.05 243.36 536.88 73.85 23.61 35.75 56.3 710.21 12.68 23.22 15.13 20.13 60.2 41.83 215.11 35.65 34.09 10.51 43.17 535.23 598.81
960.71 1451.6 2033.74 2295.01 2047.76 1151.74 534.41 587.45 453.76 433.19 640.84 903.5 897.47 280.14 571.14 230.87 608.82 459.5 487.96 1066.87 86.46 1919.77 255.58 711.8 793.67 978.02
19.28 42.73 49.64 53.69 37.46 18.82 19.09 23.35 13.52 15.95 17.18 21.75 23.15 9.62 13.02 15.72 82.84 24.48 24.65 17.21 1.2 8.36 7.13 7.06 53.36 14.9
438.45 334.93 415.65 353.18 115.48 43.53 76.06 133.92 20.55 31.59 53.77 100.5 526.46 15.24 15.0 15.3 23.4 37.97 33.63 106.48 46.87 46.81 21.62 43.43 166.27 235.91
253.22 305.59 307.71 257.92 138.69 76.29 95.64 153.32 72.84 78.09 106.32 147.03 266.42 13.52 17.86 14.67 33.63 70.73 48.65 136.49 24.87 86.94 24.85 77.07 154.6 196.84
17.21 36.83 39.63 47.87 41.92 33.95 28.95 28.84 18.49 31.21 33.09 35.83 22.37 5.18 7.11 6.16 20.68 26.13 17.3 32.63 1.5 21.85 4.56 17.17 17.74 18.08
1816.26 2405.96 4397.22 6130.63 3668.44 1137.7 1089.83 2304.43 657.92 90.91 99.72 142.1 1421.59 20.56 38.21 33.88 44.81 176.76 162.65 1781.26 187.14 355.81 55.01 190.63 1942.94 3066.43

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)