Heatmap: Cluster_240 (HCCA cluster)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Root (elongation zone)
Root (meristematic zone)
Root (stele)
Root (tip)
Root
Leaf (3rd leaf of seedling)
Leaf (3rd leaf)
Leaf (apex)
Leaf (bundle sheath)
Leaf (mesophyll)
Leaf (Seedling)
Leaf
Internode
Stalks
Shoot
Shoot (apex)
Tassels (primordia)
Tassels
Anther
Pollen
Ear (immature)
Ear (inflorescence)
Ear (leaf)
Ear (primordia)
Ear
Silks
Kernels (germinating)
Kernels
Maternal transfer zone
Nucellus
Embryo
Endosperm (transfer layer)
Endosperm
Seeds
Coleoptyle (5 day)
Seedling
Whole Plant
Zm00001d003000 (GRMZM2G006952)
- - - - - - - - - - - -7.35 - - - -5.29 - - -0.63 -2.26 - - - - - - - -2.65 - - - 5.15 -4.06 -1.16 - - -
Zm00001d003666 (GRMZM2G458879)
-3.56 -6.02 -1.19 - -1.98 -1.63 -4.23 -4.75 - - -1.37 -5.38 - - - -2.22 - -1.97 - -8.24 -2.13 - -4.59 -6.4 -5.53 -1.96 -3.29 -0.94 0.87 - -2.22 4.92 -1.31 -0.66 - -5.8 -1.33
Zm00001d003776 (GRMZM2G119689)
- - -9.23 -8.32 -9.41 - - -5.28 - - - -7.61 - - -7.81 -9.43 -5.15 -2.12 -2.53 - -6.62 -8.52 - -7.83 -5.06 -6.27 -6.21 0.16 3.11 -5.24 -9.37 4.63 -0.34 0.11 -6.6 -7.61 -7.61
Zm00001d004805 (GRMZM2G006985)
- - -8.46 - -12.04 - - - - - - -12.96 - - -13.75 -13.82 -10.55 - - - - - - - -9.13 - - -0.78 -0.07 -6.52 -10.93 5.11 -1.98 -0.68 - -10.26 -
-4.9 - -0.73 -0.14 -2.0 -5.5 -6.02 -4.53 -5.37 -4.87 - -6.45 -6.81 -4.28 -6.57 -2.34 - -2.98 -4.3 -7.39 - - - - -5.95 - -6.59 -0.06 1.09 - -8.34 4.93 -0.63 -2.02 -4.97 -4.52 -4.12
Zm00001d007443 (GRMZM2G107922)
- - - - - - - - - - - -11.4 - - - - - - - - - - - - - - - -3.33 -1.55 - - 5.09 -0.52 0.76 - - -
Zm00001d007444 (GRMZM2G107931)
- - - - -9.68 - - -9.85 -10.14 - - -9.67 - - -7.89 -13.59 - - - -12.51 -14.02 - - - - - -7.39 -1.4 1.49 - -4.64 5.0 -0.47 0.19 -11.26 -11.65 -
Zm00001d007471 (GRMZM2G055621)
- -7.87 -8.38 - -7.44 - -7.25 - -5.61 -5.76 -6.82 -5.88 - -8.53 -6.46 -6.84 -8.01 -8.24 -5.92 -12.67 -10.15 - -5.06 -7.16 -6.29 -5.32 - -1.21 1.62 -5.41 -7.95 5.01 -1.31 -0.94 -6.66 -7.56 -8.36
Zm00001d008674 (GRMZM2G341010)
- - - - -12.71 - - - - - - -12.46 - - - -15.78 - -7.62 -4.82 -11.15 - - - - -9.45 - - -0.07 0.96 - -9.1 5.01 -0.67 0.36 - - -9.42
Zm00001d008750 (GRMZM2G144464)
-4.36 -5.77 -2.1 - -2.77 -5.9 -0.86 - - - - -3.37 - - -6.89 -7.13 -5.38 -4.5 - -6.73 - -2.72 - -3.41 -2.97 - - 0.74 -0.33 -0.32 -5.26 4.78 0.82 1.53 -9.04 -8.46 -3.87
Zm00001d008898 (GRMZM2G382379)
-6.92 -7.09 -10.68 -2.66 -4.48 - - -3.57 - - - -7.76 -0.65 -1.2 -3.73 -1.57 -3.28 -3.01 -4.25 -10.44 -0.26 -2.05 - -1.18 -0.72 -3.09 -2.2 -1.27 1.59 -5.67 -0.86 4.71 0.72 -2.48 -2.01 -3.12 -5.13
Zm00001d010295 (GRMZM2G371524)
-3.7 -4.35 -3.58 -4.08 -3.06 -6.8 - -2.07 -6.02 -5.93 - -6.81 -2.55 0.03 -3.21 -0.29 -1.76 -2.59 -2.17 - 0.38 -0.03 -1.73 -0.33 -0.58 -3.14 -2.38 -1.94 - -0.81 -3.17 4.7 -3.26 -2.84 0.85 -3.49 -3.17
Zm00001d010430 (GRMZM2G362163)
- -5.29 - - -6.31 - -4.27 - - - - -3.97 - -4.19 -5.14 -5.01 -5.57 - -2.11 -3.63 -5.28 - - -4.61 -5.18 - - -0.25 - - -1.71 5.07 -0.6 -0.54 -8.45 -3.08 -
Zm00001d011035 (GRMZM2G005710)
-4.51 -7.02 -3.48 -5.7 -4.54 -2.78 -3.26 -3.85 -4.71 -4.44 -4.59 -3.54 -7.76 -3.95 -4.47 -3.58 -4.34 -4.55 -4.5 -7.44 -3.32 -5.94 -1.77 -5.01 -3.14 -4.92 -4.18 -0.01 0.63 -4.52 -4.18 4.96 -1.01 -0.39 -3.6 -3.79 -3.32
Zm00001d011435 (GRMZM2G109144)
- -9.1 - - -8.54 -9.26 - -5.57 - - - -7.74 - -1.1 - -9.32 -2.48 -5.92 -2.77 -8.49 -3.48 -5.6 - -8.41 -9.81 - -3.08 -1.85 -1.2 -5.86 -3.81 5.07 0.32 -1.8 -10.67 -7.58 -5.34
- - - - - - - - - - - - - - - -13.05 - - -10.72 -5.46 - - - - - - - -4.98 -1.03 - - 5.18 -3.17 -4.88 - - -
Zm00001d015276 (GRMZM2G367431)
- - - - -3.39 - - - - - - -8.28 - - - -6.0 - - -4.33 -4.88 - - - - -2.97 -2.38 - -3.07 3.1 - - 4.8 - - - -6.8 -
-8.8 -11.26 -9.74 -7.99 -8.88 - - - -7.77 -7.15 -9.71 -8.58 - -6.79 -7.05 -6.41 -11.05 -8.51 -10.34 -9.43 -12.9 - - - -11.06 - -6.34 -3.29 1.71 -8.12 - 5.06 -3.85 -4.05 -12.62 -8.19 -8.7
Zm00001d018837 (GRMZM2G032145)
- - -12.23 - -16.77 -12.01 -13.44 - - - -7.44 -11.4 - -8.23 -14.06 -15.08 - - -13.7 -14.16 -8.9 - -7.96 -12.88 -9.47 - - -0.58 0.61 - -7.47 4.99 0.0 1.04 -14.42 -11.48 -
Zm00001d019027 (GRMZM2G344323)
- - - - - - - - - - - - - - - - - - - - - - - - - - - -0.38 1.68 - - 4.94 -0.22 0.59 - - -
- - - - - - - - - - - - - - - - - - - - - - - - - - - -5.09 2.34 - - 4.99 - -2.35 - - -
Zm00001d022533 (GRMZM2G059165)
- - - - -6.57 - - - - - - - - - - -11.54 - -2.18 -6.5 -3.16 - - - - - - - 0.25 - - - 5.0 0.42 1.1 - - -
Zm00001d024549 (GRMZM2G175101)
- - - - -8.87 - - - - -11.04 - - - - - -17.39 - -7.0 -12.74 -9.23 -11.4 - - - - - - -0.73 1.11 - -7.72 5.02 -0.93 0.38 - -13.29 -11.66
Zm00001d025037 (GRMZM2G063042)
-2.37 -1.53 -1.76 -1.32 -0.91 -4.94 -4.33 -2.88 -3.77 -3.58 -4.24 -2.17 -1.82 -1.21 -2.23 -1.65 -1.42 -2.44 -0.59 -2.29 -2.26 -3.14 -2.68 -1.32 -2.76 -0.51 -1.91 -0.63 -0.07 -0.71 -1.29 4.58 -0.12 0.8 -2.72 -2.14 -1.75
Zm00001d025878 (GRMZM2G073041)
- - - - -6.06 - - -4.53 - - -2.31 -5.98 - - -5.5 -2.55 - - -6.01 -2.94 -2.07 - - -5.24 - - 0.25 0.8 - - -4.76 5.01 -1.29 -1.37 -4.52 -4.19 -2.8
Zm00001d026132 (GRMZM2G360529)
- - - - -9.69 - - - - - - -8.81 - -5.67 -8.48 -9.15 - -0.73 -2.61 -1.7 -11.79 -8.02 - - - -7.4 - -0.85 2.28 - -9.31 4.88 -0.84 -1.19 - -10.49 -5.11
Zm00001d026556 (GRMZM2G107557)
-3.95 -2.03 -1.08 -1.68 -1.12 -1.17 -0.5 -0.92 -0.94 -0.66 -1.71 -0.6 -0.88 -1.26 -1.29 -0.33 -0.57 -1.11 -0.56 -6.84 -1.11 -0.73 -0.93 -0.82 -1.0 -0.67 -0.82 0.1 -0.42 -0.44 -0.99 4.11 -0.41 0.43 -1.21 -0.83 -1.61
Zm00001d029090 (GRMZM2G318767)
- - - - -1.19 - - -4.58 - - - - - - - -4.26 -2.09 - - - 1.0 -0.89 - -0.73 -0.83 - -0.35 -0.58 - - 0.71 4.86 -4.36 -2.5 - -5.63 -2.44
Zm00001d031180 (GRMZM2G478599)
- - - - -1.85 - - - - - - -7.36 - - - -7.23 - - -7.02 - -5.84 - - - -1.75 - - -0.19 - - 1.69 4.98 -3.58 -0.79 - -8.22 -
Zm00001d031861 (GRMZM2G028386)
- - -9.19 - -9.27 - -5.57 -10.13 - - - - - - -7.93 -9.91 - - -9.84 -9.23 -9.87 - - - - - -5.42 -1.87 1.43 - 0.52 4.96 -1.81 0.27 - -8.72 -7.17
Zm00001d032448 (GRMZM2G045082)
-8.72 - - - -9.97 - -10.67 - - - - -9.77 - -6.08 -6.42 -6.21 -7.48 -2.61 -5.23 -1.3 -7.3 -6.74 - -2.6 -5.98 - -7.26 -3.17 1.5 -5.9 -1.64 5.03 -2.48 -3.58 -13.24 -9.37 -10.57
-3.55 - -4.09 - -3.67 - - - -2.61 - -1.07 -3.19 - - -5.5 -3.86 - - -4.74 -3.05 -3.5 - - -4.07 -2.28 - 0.21 -0.58 - - - 5.03 -1.19 -0.96 - -6.78 -
Zm00001d036803 (GRMZM2G401821)
-2.53 - -4.93 - -4.03 - - - - - - -5.49 - -2.82 - -4.79 - -3.41 -3.75 - - - - - - - - -0.3 - - -5.27 5.04 0.34 0.27 -5.23 -4.76 -
Zm00001d036953 (GRMZM2G382618)
- - - - -7.47 -3.87 - -3.39 0.76 0.32 - -1.55 - - -0.55 -3.82 -4.54 -2.42 -3.82 - - -4.32 -2.13 -6.81 -3.3 -3.28 -2.97 -7.25 1.68 -3.3 -6.98 4.77 -7.32 -2.15 -2.1 -0.22 -
Zm00001d039273 (GRMZM2G013201)
-2.03 -2.73 -1.35 -1.11 -0.8 -1.91 -2.21 -1.83 -1.83 -1.95 -2.16 -1.33 -0.71 0.19 -0.61 -0.76 -1.31 -0.77 -1.38 -8.57 -0.87 -0.32 -1.15 -0.37 -0.49 -0.11 -1.73 0.71 2.57 0.13 -3.08 3.6 0.1 0.15 -0.88 -1.32 -1.59
Zm00001d039430 (GRMZM2G055434)
- - -9.92 - -7.36 -9.23 - -10.04 - - - -10.1 - - -8.57 -10.11 -5.77 -6.04 -2.9 -3.34 -7.82 - - -10.06 -8.73 -6.25 - -0.51 2.2 - -7.44 4.91 -0.38 -0.78 -12.67 -8.34 -8.4
Zm00001d039431 (GRMZM2G357129)
- - - - - -2.5 -3.16 - - - - -3.33 - - -5.45 -5.31 - - - - -3.98 - - -1.84 - - -0.95 0.3 - - - 4.87 0.98 1.51 -1.54 - -
Zm00001d040247 (GRMZM2G094523)
- - -6.53 0.45 -2.14 - -6.23 -7.65 - -5.24 -4.93 -5.19 - - -2.23 -8.24 - -6.72 -8.01 - - - - - -5.05 -0.91 -3.95 -5.15 1.88 - - 4.89 -1.27 -0.7 -6.55 -5.64 -4.69
Zm00001d042959 (GRMZM2G127040)
- - - - - - - - - - - - - - - -8.98 - - - -0.75 - - - - - - - 1.43 - - - 4.9 0.94 0.95 - - -
- - - - -3.03 -4.11 - - - - -4.54 -3.11 - -3.42 -7.26 -0.85 -4.33 -3.29 -4.65 -7.28 - -2.24 -2.93 -5.92 -4.65 - - -2.95 - - -4.11 5.1 -0.73 -2.63 -8.9 -2.95 -4.98
Zm00001d048630 (GRMZM2G107302)
- - - - -10.43 - - - - - - -16.36 - - - -15.73 - - -14.3 -13.73 - - - - - - - -2.63 0.78 - -8.6 5.0 0.15 1.05 - -12.01 -
Zm00001d050102 (GRMZM2G395247)
-5.55 -2.61 -7.14 -2.14 -2.88 -7.45 -6.55 - -3.46 -4.78 - -5.32 - -5.03 -9.94 -8.7 - -4.24 -1.76 - -8.55 - - -6.26 - - -5.35 0.73 -1.19 - -4.65 4.95 0.12 0.66 -8.37 -5.02 -3.18
Zm00001d050326 (GRMZM2G415219)
- - - - -6.45 -5.23 - - - - - -6.81 - - -6.86 -4.62 -5.64 -6.03 -5.62 - - - -1.25 - - - - -0.86 1.38 - -6.16 4.99 -0.62 -0.14 -9.97 -6.74 -6.1
Zm00001d050479 (GRMZM2G369721)
- - - -4.43 -8.1 -6.57 -8.24 - -7.26 - -2.8 -6.96 - - -6.36 -10.63 - - - - -5.38 - - - - -5.92 - -2.79 0.83 - - 5.07 -0.28 -1.11 - - -
Zm00001d050935 (GRMZM2G159691)
-0.79 -1.3 -0.7 -3.6 -0.55 -2.38 -2.2 -1.52 -1.96 -2.43 -2.5 -1.71 -1.5 -1.19 -1.96 -0.82 -1.18 -0.2 -0.99 -0.2 -0.53 -2.23 -2.65 -1.81 -1.2 -0.77 -0.71 0.16 0.41 -1.07 0.32 4.2 -0.09 0.05 -1.09 -1.7 -1.45
Zm00001d053098 (GRMZM5G803611)
- - - - - - - - - - - -13.83 - - - -14.3 - - - - - - - - - - - -1.73 -0.23 - -6.84 5.06 0.2 0.51 -10.94 -11.07 -7.16
Zm00001d053113 (GRMZM2G138392)
- - - - - - - - - - - -16.28 - - - -14.09 - - - - - - - - - - - -0.5 1.41 - - 5.03 -1.23 -0.88 - - -
Zm00001d053784 (GRMZM2G010097)
- - - - - - - - - - - -12.28 - - - -14.87 - - - -10.48 - - - - - - - 0.02 0.17 - -6.83 4.96 -1.6 1.77 - -11.66 -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.