Heatmap: Cluster_344 (HCCA cluster)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Root (elongation zone)
Root (meristematic zone)
Root (stele)
Root (tip)
Root
Leaf (3rd leaf of seedling)
Leaf (3rd leaf)
Leaf (apex)
Leaf (bundle sheath)
Leaf (mesophyll)
Leaf (Seedling)
Leaf
Internode
Stalks
Shoot
Shoot (apex)
Tassels (primordia)
Tassels
Anther
Pollen
Ear (immature)
Ear (inflorescence)
Ear (leaf)
Ear (primordia)
Ear
Silks
Kernels (germinating)
Kernels
Maternal transfer zone
Nucellus
Embryo
Endosperm (transfer layer)
Endosperm
Seeds
Coleoptyle (5 day)
Seedling
Whole Plant
Zm00001d001814 (GRMZM2G019500)
0.62 0.7 0.18 0.94 0.08 -1.15 -1.38 -0.56 -1.35 -1.7 -1.54 -0.6 0.35 0.28 -0.52 0.32 0.45 -0.2 0.51 -7.09 0.04 -0.25 0.62 0.28 -0.39 -0.77 0.78 0.38 -0.39 1.04 0.14 -1.11 -0.21 0.15 0.66 -0.32 -0.52
Zm00001d002036 (GRMZM2G095308)
0.32 0.55 0.73 0.73 0.55 -1.02 -1.49 -0.69 -0.9 -0.94 -0.45 -0.71 -1.18 0.27 -0.74 0.46 0.05 -0.22 0.1 -4.36 -0.34 -1.46 -0.57 -0.16 -0.5 -0.57 0.32 0.24 1.59 0.96 -0.29 0.86 -0.38 -0.05 0.48 -0.35 -0.04
Zm00001d002739 (GRMZM2G121223)
-0.6 -1.51 -1.57 0.4 -0.38 -0.6 -0.76 -0.73 -2.33 -1.86 -3.03 -1.57 0.26 1.46 -0.4 0.17 0.45 0.19 0.05 -2.08 1.04 0.06 -2.1 0.84 -0.92 -0.34 -0.89 0.02 1.5 1.77 1.25 0.34 -0.67 -0.2 -2.04 -0.58 -0.21
Zm00001d004190 (GRMZM2G176274)
0.1 -0.33 0.81 -0.49 0.25 -2.16 -2.42 -0.37 -1.53 -1.57 -2.44 -0.97 0.54 0.09 -0.37 0.46 0.65 0.24 -0.48 -6.87 0.34 0.24 -2.06 1.25 -0.51 1.03 0.04 -0.18 -1.3 1.54 -0.21 0.87 -1.14 -0.61 1.5 -0.54 -1.23
1.45 1.13 0.62 -0.36 0.56 -3.23 -3.11 -0.74 -1.64 -1.97 -1.51 -1.04 0.24 0.77 -0.1 0.49 -0.67 -0.59 -0.16 -0.7 -0.16 -1.52 -1.06 -0.63 -0.45 0.48 0.88 0.69 1.31 -0.48 0.31 0.16 -0.31 0.42 0.17 -0.67 -0.67
Zm00001d006057 (GRMZM2G150319)
0.25 0.85 1.45 0.87 -0.13 -3.68 -3.8 -0.4 -2.94 -3.06 -4.91 -2.73 0.8 1.63 -1.47 0.82 0.15 -0.53 -0.11 -4.89 0.29 -0.1 -4.82 0.04 -0.13 -0.2 -0.39 0.54 -0.82 1.71 0.3 0.39 -0.68 0.54 -0.54 -1.09 -0.72
Zm00001d006337 (GRMZM2G056632)
0.77 0.31 0.64 0.6 0.51 -1.41 -1.49 -0.9 -1.58 -1.89 -1.14 -0.88 -0.62 0.62 -0.27 0.5 -0.4 0.07 -0.23 -1.93 -0.8 -0.49 0.27 -0.72 0.12 0.78 0.3 -0.03 1.72 0.41 0.09 -0.03 -0.6 -0.12 0.43 -0.36 -0.3
Zm00001d007152 (GRMZM2G010551)
-1.3 -0.79 -0.03 0.44 -0.38 -0.8 -1.39 -0.33 -1.69 -1.59 -1.91 -1.18 -0.62 1.28 -0.98 0.26 0.75 0.42 -0.17 -5.09 0.07 0.34 -0.02 1.09 -0.26 -0.28 0.25 -0.52 1.37 1.51 -0.18 0.97 -1.14 -1.24 0.78 -0.63 -0.76
Zm00001d008395 (GRMZM2G003853)
1.26 0.25 -0.06 0.74 0.37 -2.5 -2.48 -0.63 -2.25 -2.41 -3.12 -1.69 0.98 1.21 -0.84 0.18 0.71 -0.05 0.56 -5.05 0.44 0.61 -1.49 0.09 0.61 -0.02 -0.39 0.18 0.67 0.75 -0.34 -0.19 0.35 -0.16 -0.35 -0.9 -1.2
Zm00001d008564 (GRMZM2G153766)
0.3 0.35 0.61 0.31 0.13 -2.16 -1.77 -0.28 -1.69 -1.94 -1.46 -1.37 0.98 0.14 -1.4 0.67 1.01 0.11 0.58 -3.88 0.88 -0.15 -2.01 0.37 0.88 -0.13 0.7 -0.11 0.43 0.67 0.3 -0.17 -0.54 -0.18 -0.22 -1.13 -0.45
Zm00001d009866 (GRMZM2G067080)
0.49 0.92 0.41 0.31 0.1 -2.75 -3.33 -0.18 -2.37 -2.57 -1.63 -1.47 0.37 -0.11 -0.99 0.72 1.15 -0.17 0.84 -6.25 0.47 0.32 -1.73 -0.03 0.09 -0.42 0.48 0.42 1.19 -0.01 0.61 -0.37 -0.1 0.26 0.81 -1.08 -2.26
Zm00001d010491 (GRMZM2G134230)
0.39 0.05 0.44 0.61 0.12 -1.2 -1.21 -0.37 -1.24 -1.86 -2.92 -0.69 0.51 0.76 -0.75 0.54 0.36 0.38 0.72 -4.5 -0.15 0.42 -1.05 0.02 -0.25 0.37 0.62 0.75 0.25 1.26 -0.03 -1.49 -0.23 0.21 -0.01 -0.57 -1.15
Zm00001d010504 (GRMZM2G111411)
0.83 0.97 0.89 0.61 0.89 -1.85 -1.65 -0.23 -0.9 -0.95 -0.16 0.02 0.87 -0.37 0.28 0.48 0.54 -0.25 -0.38 -5.88 0.34 -0.06 -0.24 0.31 0.66 0.3 0.59 -0.57 -1.35 -0.18 -0.29 -2.25 -1.27 -0.55 -0.01 -0.23 -0.33
Zm00001d011204 (GRMZM2G116083)
0.59 0.8 -0.33 1.75 0.14 -2.7 -2.33 -0.06 -2.4 -2.56 -2.16 -1.28 0.53 1.17 -0.59 0.4 0.49 0.06 0.76 -5.35 0.49 0.72 -1.3 -0.02 -0.1 -1.15 -0.55 0.29 0.72 0.97 -0.74 -0.17 0.1 -0.21 -0.62 -0.83 -1.46
Zm00001d011786 (GRMZM2G067601)
0.9 0.86 0.53 0.39 0.63 -3.15 -3.37 -0.74 -2.57 -3.69 -3.82 -2.35 -0.05 0.64 -1.2 0.57 0.52 0.01 0.52 -4.44 0.38 -0.33 -1.18 -0.02 0.73 -0.44 0.68 0.34 1.3 1.05 0.63 -0.59 -0.79 0.48 -0.25 -1.09 -1.02
Zm00001d012811 (GRMZM5G861064)
0.07 0.55 -0.18 0.95 0.12 -1.17 -1.63 -0.57 -1.26 -1.2 -0.7 -0.73 0.39 0.3 -0.8 0.35 0.94 -0.03 0.35 -5.62 0.33 0.41 -0.46 0.76 -0.56 -0.05 -0.04 -0.23 0.91 1.25 -0.51 0.59 -0.49 -0.73 -0.3 -0.67 -0.35
Zm00001d012854 (GRMZM2G112015)
0.35 0.21 0.76 0.22 0.02 -1.22 -0.94 -0.51 -0.91 -1.16 -0.6 -0.71 0.35 0.3 -0.68 0.81 1.26 0.38 0.79 0.26 -0.14 0.96 -2.33 -0.4 0.64 0.54 0.03 -0.31 -4.27 0.56 -0.25 -1.59 -0.25 0.03 -0.5 -0.17 -0.98
Zm00001d013966 (GRMZM2G039542)
0.53 0.33 0.74 0.17 0.13 -1.92 -1.74 -0.88 -1.37 -1.96 -3.97 -1.05 0.52 0.22 -0.95 0.63 -0.16 0.26 0.78 -4.82 0.32 -0.22 -1.31 -0.27 0.11 -0.08 0.81 1.06 1.34 0.92 0.23 0.24 -0.03 0.38 -1.27 -0.85 -1.39
Zm00001d016060 (GRMZM2G140582)
0.44 0.77 0.68 0.07 -0.11 -3.71 -4.37 -0.2 -3.12 -4.13 -3.48 -2.74 0.8 0.25 -1.51 0.5 0.47 -0.26 0.8 -8.31 0.63 0.7 -1.9 0.89 0.2 -0.43 0.12 0.24 1.75 1.31 0.08 -0.31 -0.7 0.22 -0.43 -1.5 -1.95
Zm00001d019191 (GRMZM2G105996)
1.15 0.44 0.86 -0.12 0.41 -2.72 -2.56 -0.99 -1.76 -2.12 -1.91 -0.96 0.64 0.68 -0.34 0.52 -0.19 -0.0 0.02 0.16 0.35 -0.28 -1.79 -0.43 0.31 0.46 0.5 0.45 0.77 0.21 0.16 -0.42 -0.3 0.49 0.09 -0.53 -0.67
Zm00001d019706 (GRMZM2G074531)
1.07 0.8 0.95 0.05 0.2 -1.52 -1.27 -0.05 -1.12 -1.22 -1.31 -0.96 0.5 -0.28 0.03 0.46 0.23 0.37 0.88 -3.53 -0.24 -0.33 -0.97 -0.06 -0.16 -0.19 0.34 0.41 1.08 -0.29 -0.09 -0.29 -0.32 0.41 -0.35 -0.2 -0.95
Zm00001d020644 (GRMZM2G126177)
0.58 0.42 0.57 0.88 0.18 -1.62 -1.47 -0.45 -1.23 -1.71 -1.66 -0.89 0.57 -0.22 -0.52 0.7 1.14 0.39 1.11 -2.59 0.51 0.5 -1.95 0.18 0.54 -0.73 0.67 -0.04 0.39 0.12 -0.05 -0.65 -0.36 -0.41 -1.04 -0.48 -0.68
Zm00001d021267 (GRMZM2G110500)
-0.18 -0.66 0.54 -0.52 0.1 -0.86 -0.54 -0.22 -0.53 -0.52 -0.64 -0.52 0.3 0.66 0.06 0.59 0.81 -0.19 -0.09 -4.01 1.15 0.22 -1.74 0.34 0.31 0.77 -0.09 0.51 -0.67 0.58 -0.91 0.14 -0.04 0.26 -0.16 -0.19 -1.06
Zm00001d025998 (GRMZM2G017789)
-0.32 0.79 0.99 0.12 0.29 -2.0 -2.38 -0.21 -1.49 -1.88 -1.95 -1.33 0.57 0.75 -0.6 0.89 0.67 0.51 1.52 -7.06 -0.12 -0.8 -1.63 0.05 -0.02 -0.41 1.26 -0.1 0.65 0.44 0.13 -0.02 -1.46 0.11 -0.78 -0.75 -1.15
Zm00001d026176 (GRMZM2G124965)
-0.22 -0.45 0.48 0.15 -0.31 -1.88 -2.03 -0.81 -1.78 -1.64 -1.42 -1.31 -0.24 0.72 -0.99 0.47 0.44 0.34 0.79 -0.39 0.18 -0.12 -1.5 0.46 -0.5 0.36 -0.15 0.29 1.68 1.37 -0.53 1.23 -0.36 -0.1 -1.04 -0.67 -0.84
Zm00001d027342 (GRMZM2G144101)
0.87 0.74 -0.16 0.46 0.19 -3.18 -3.93 -0.3 -2.15 -2.6 -2.37 -1.61 1.23 0.56 -0.45 0.55 0.33 0.17 -0.14 -4.71 0.68 0.39 -2.45 0.38 0.55 0.28 1.0 0.36 1.53 -0.15 -0.26 0.22 -0.28 -0.3 -1.88 -1.2 -1.54
Zm00001d028773 (GRMZM2G006085)
0.62 -0.34 0.06 -0.22 0.14 -1.69 -1.94 -0.01 -1.14 -1.6 -2.69 -1.13 1.23 0.74 -0.33 0.8 -0.03 -0.1 0.01 -1.27 0.16 0.93 -1.56 -0.15 0.24 1.9 -0.2 0.61 0.57 0.27 -0.25 -0.32 -0.45 -0.35 -1.21 -0.72 -1.38
Zm00001d028802 (GRMZM2G104464)
-0.21 -0.14 0.46 -0.09 0.08 -1.77 -2.02 -0.35 -1.54 -2.01 -1.64 -0.94 0.4 0.66 -0.98 0.5 -0.05 -0.01 -0.04 -4.43 0.51 -0.16 0.16 0.87 -0.19 0.2 -0.03 -0.24 1.78 0.56 0.09 0.47 -0.53 0.35 0.54 -0.98 -0.15
Zm00001d028918 (GRMZM2G018941)
0.56 0.26 0.76 -0.33 0.15 -0.98 -0.82 -0.19 -0.43 -0.92 -1.35 -0.74 0.05 0.32 -0.65 0.17 0.15 0.25 0.29 -1.71 -0.12 0.73 -1.93 -0.24 0.62 1.49 0.73 -0.09 0.77 -0.8 -0.33 0.23 -0.53 -0.51 0.08 -0.46 -0.78
Zm00001d030157 (GRMZM2G011518)
0.44 0.1 0.65 0.56 0.28 -1.18 -0.39 0.06 -0.87 -1.46 -0.82 -0.62 0.51 0.05 -0.74 0.42 0.58 0.15 -0.2 -0.05 0.56 0.81 -1.49 -0.12 0.63 0.47 0.11 -0.08 -0.29 0.22 -0.05 -1.34 -0.42 0.12 0.17 -0.36 -0.84
Zm00001d030934 (GRMZM2G003631)
0.36 0.43 0.55 1.38 0.38 -0.82 -0.87 -0.59 -0.34 -0.88 -2.2 -0.28 0.37 0.61 -0.27 0.28 -0.32 -0.14 0.24 -2.87 -0.26 -0.58 -0.34 -0.34 -0.48 0.45 0.71 0.37 -0.2 0.79 0.45 -1.22 -0.34 0.04 -0.01 -0.13 -0.42
Zm00001d032263 (GRMZM2G119357)
-0.25 -0.33 0.18 -0.15 0.05 -0.99 -0.97 -0.15 -1.27 -1.02 -1.35 -0.86 0.05 -0.02 -0.14 0.53 0.67 0.11 0.37 -1.73 1.3 0.38 -1.11 0.59 0.05 0.23 -0.26 0.3 0.72 0.99 -0.19 -0.2 -0.05 0.56 -0.47 -0.33 -0.91
Zm00001d032588 (GRMZM2G087651)
0.97 0.58 0.72 0.58 0.45 -1.95 -1.69 -0.82 -1.23 -1.76 -3.69 -0.83 0.78 1.08 -0.82 0.38 -0.27 0.2 0.1 -3.64 0.02 -0.07 -1.35 -0.51 0.1 1.06 0.83 0.84 0.81 -0.03 -0.3 -1.08 -0.23 0.13 0.0 -0.69 -1.51
Zm00001d033596 (GRMZM2G097164)
0.7 0.58 0.37 0.09 0.33 -1.48 -1.62 -0.46 -1.4 -1.73 -1.28 -0.55 0.59 -0.03 -0.19 0.27 0.43 0.09 0.66 -4.53 0.17 0.81 -1.28 0.15 0.59 0.41 0.79 -0.19 1.26 -0.08 0.14 -0.62 -0.84 -0.17 -0.4 -0.48 -0.71
Zm00001d036540 (GRMZM2G150209)
0.09 0.11 0.84 0.27 0.17 -1.64 -2.01 -0.56 -1.19 -1.37 -1.76 -0.81 -0.08 0.05 -0.88 0.49 0.37 0.06 0.03 -6.21 0.53 0.83 -1.53 0.25 0.52 -0.52 0.1 0.52 0.78 1.16 0.32 0.38 0.03 0.26 0.19 -0.44 -0.96
0.71 0.75 -0.01 0.65 0.27 -1.51 -1.94 0.05 -1.61 -2.41 -1.2 -1.14 0.22 0.42 0.19 0.33 0.61 0.34 0.43 -5.2 0.7 0.37 -1.35 0.32 0.16 0.02 0.48 0.6 0.78 0.38 0.01 -0.41 -0.17 0.11 -1.85 -0.45 -1.13
Zm00001d037926 (GRMZM2G035526)
1.09 0.44 0.1 -0.03 0.16 -2.51 -2.33 -0.19 -2.1 -2.2 -1.46 -1.04 0.35 -0.56 -0.99 0.43 0.42 -0.31 0.79 -4.97 0.64 1.23 -0.95 -0.11 0.55 -0.12 0.67 0.85 0.36 -0.73 0.56 0.1 0.47 0.39 0.11 -1.2 -1.57
Zm00001d037967 (GRMZM2G123503)
0.36 0.72 0.1 0.1 -0.07 -1.95 -2.12 -0.33 -2.38 -2.41 -1.92 -1.43 0.35 0.53 -1.07 0.32 0.47 0.01 0.48 -4.51 0.45 -0.2 -1.61 0.68 -0.19 -0.76 -0.19 0.23 1.65 1.07 -0.4 1.64 -0.41 -0.5 0.24 -0.91 -1.19
0.06 0.25 0.13 0.53 0.39 -1.59 -1.43 -0.21 -1.31 -1.55 -0.66 -0.37 0.75 -0.11 -0.0 0.3 0.69 -0.03 0.4 -6.09 0.81 0.29 -0.16 0.32 0.61 0.27 0.41 0.11 0.5 0.38 -0.41 -0.74 -0.53 0.05 -0.06 -0.45 -0.46
Zm00001d040752 (GRMZM2G038356)
1.5 1.06 0.28 0.06 0.34 -1.6 -1.77 -1.02 -1.33 -1.61 -1.36 -0.95 0.9 0.25 0.01 0.31 -0.02 0.92 0.37 0.14 0.12 -0.12 -0.44 -0.36 0.53 -0.67 0.65 -0.05 -0.37 -0.14 0.26 -1.43 -0.74 -0.29 0.34 -0.43 -1.18
Zm00001d041603 (GRMZM2G122443)
0.49 0.72 0.37 0.4 -0.0 -2.44 -2.33 -0.46 -2.34 -2.91 -1.73 -1.78 0.43 0.27 -1.06 0.65 0.63 0.05 0.97 -7.42 -0.06 -0.48 -1.1 0.04 -0.15 -0.25 0.36 0.27 2.1 0.79 -0.46 -0.5 0.29 0.46 -0.29 -0.79 -1.58
Zm00001d042279 (GRMZM2G056702)
0.04 -1.52 0.31 -0.65 -0.44 -2.54 -3.02 -0.6 -1.96 -2.06 -3.64 -1.51 0.8 1.62 -0.64 0.91 -0.24 0.13 -0.41 -6.39 0.02 0.86 -1.88 -0.28 0.64 0.88 -1.27 0.81 1.6 0.88 -0.04 -0.41 -0.31 1.0 -0.09 -0.25 -1.29
Zm00001d044391 (GRMZM2G042078)
1.13 0.84 -0.06 -0.08 0.05 -2.99 -3.06 -0.35 -1.7 -2.34 -2.92 -1.37 1.01 1.53 -0.47 0.36 0.23 0.07 0.14 -4.56 0.1 0.38 -1.9 -0.32 0.58 0.14 0.3 0.52 1.16 -0.24 0.41 -0.08 -0.07 0.09 -0.28 -0.91 -1.69
Zm00001d045493 (GRMZM2G050166)
-0.66 0.02 -0.55 -0.23 -0.3 -1.71 -1.71 0.43 -2.18 -1.72 -1.62 -1.26 0.04 0.96 -0.84 0.31 0.62 0.19 -0.26 -1.55 0.96 0.39 -0.86 0.73 -0.42 -0.07 -0.24 0.17 1.49 1.11 0.08 0.87 -0.12 0.18 -0.21 -0.77 -0.57
Zm00001d047282 (GRMZM2G124317)
0.66 -0.25 0.77 -0.52 -0.1 -3.15 -3.0 -0.22 -1.89 -2.76 -3.5 -1.87 0.58 1.48 -0.36 0.75 -0.15 -0.13 -0.66 -0.15 0.75 1.22 -2.79 -0.06 0.2 1.12 -0.04 0.49 0.05 0.38 0.35 0.43 -0.74 0.41 -1.09 -0.88 -0.85
Zm00001d050993 (GRMZM2G097190)
-0.64 -0.27 0.38 0.76 0.29 -1.45 -1.26 -0.46 -1.49 -1.51 -0.41 -0.63 0.39 -0.02 -0.78 0.33 0.69 0.14 0.79 -5.89 0.53 0.63 -0.43 0.3 0.43 0.19 0.72 0.15 -0.0 0.38 0.94 -0.93 -0.51 0.26 0.1 -0.68 -0.89
Zm00001d052198 (GRMZM2G108919)
-0.39 0.11 0.64 -0.82 0.25 -1.93 -2.13 -0.15 -1.0 -1.09 -1.69 -0.92 0.1 0.31 -0.51 0.66 0.31 0.28 0.95 -3.5 0.83 0.62 -0.67 0.33 0.44 0.04 0.56 0.43 0.26 0.06 0.66 -0.09 -0.46 0.03 0.57 -0.67 -0.85
Zm00001d053018 (GRMZM2G000014)
-2.33 -0.2 -0.43 0.28 -0.08 -4.13 -2.58 0.43 -2.95 -3.02 -0.81 -0.87 -0.11 1.3 -0.93 0.56 1.31 -0.73 0.72 -3.29 0.46 0.41 -0.69 1.43 -0.13 -0.96 0.02 -0.13 1.45 -0.53 0.26 0.81 -0.34 0.36 -0.5 -0.9 -0.31
Zm00001d053564 (GRMZM2G162992)
-2.12 -0.22 -0.52 -0.16 -0.25 -1.34 -1.7 -0.13 -2.04 -1.66 -0.64 -0.86 -0.48 1.2 -0.95 0.25 0.97 -0.6 0.42 -6.38 0.26 0.43 -0.64 1.0 -0.53 0.03 -0.39 0.23 0.35 0.99 0.58 1.91 -0.4 -0.02 -0.33 -0.61 -0.18
Zm00001d054078 (GRMZM2G163227)
0.57 0.83 0.79 0.06 0.48 -0.91 -0.88 -0.47 -0.29 -0.61 -1.3 -0.47 0.83 0.38 -0.26 0.36 0.2 0.34 0.47 -3.05 0.19 -0.62 -0.57 0.19 -0.28 0.3 0.69 0.27 -1.06 0.54 -0.21 -1.17 -0.27 -0.12 0.0 -0.01 -0.76

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.