Heatmap: Cluster_100 (HCCA cluster)

View as: (view zlog-transformed or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Showing raw values)

Gene
Root (elongation zone)
Root (meristematic zone)
Root (stele)
Root (tip)
Root
Leaf (3rd leaf of seedling)
Leaf (3rd leaf)
Leaf (apex)
Leaf (bundle sheath)
Leaf (mesophyll)
Leaf (Seedling)
Leaf
Internode
Stalks
Shoot
Shoot (apex)
Tassels (primordia)
Tassels
Anther
Pollen
Ear (immature)
Ear (inflorescence)
Ear (leaf)
Ear (primordia)
Ear
Silks
Kernels (germinating)
Kernels
Maternal transfer zone
Nucellus
Embryo
Endosperm (transfer layer)
Endosperm
Seeds
Coleoptyle (5 day)
Seedling
Whole Plant
Zm00001d002079 (GRMZM2G174917)
2.57 0.14 2.9 13.88 18.02 9.85 4.12 8.55 3.55 3.06 10.91 11.48 6.01 12.09 12.67 12.99 9.78 4.9 5.26 0.0 6.43 3.6 12.37 23.18 8.63 1.96 2.33 2.06 21.33 0.78 3.05 8.95 0.76 1.8 4.66 12.18 11.06
Zm00001d002405 (GRMZM2G071907)
6.94 2.7 3.95 24.59 28.54 20.48 11.84 15.15 12.19 7.27 20.09 12.6 11.62 27.83 7.57 27.68 23.74 17.77 8.21 0.04 49.64 16.98 64.02 45.69 21.66 2.84 3.14 13.72 28.99 14.21 25.87 25.3 4.32 4.13 5.24 14.3 15.47
Zm00001d002520 (GRMZM2G322817)
8.96 3.24 5.39 18.44 77.99 4.59 16.31 41.19 6.94 7.49 14.5 39.88 13.83 16.65 41.31 25.01 15.43 25.01 10.65 0.03 93.71 36.55 26.25 87.44 111.73 31.22 13.61 22.53 19.96 34.49 6.82 6.92 14.76 25.28 9.77 76.55 22.66
Zm00001d003041 (GRMZM2G082670)
8.57 1.94 1.83 2.53 12.05 13.91 11.46 14.8 9.61 8.13 6.48 11.23 6.29 7.4 14.34 8.21 3.88 12.61 41.64 0.46 18.29 16.8 7.31 14.87 5.58 1.7 10.72 3.09 11.9 0.46 4.49 20.67 3.6 0.84 5.78 11.74 5.79
Zm00001d003624 (GRMZM2G361100)
5.03 0.94 0.6 2.51 4.48 0.02 0.0 0.42 0.34 0.08 0.07 0.33 2.55 0.65 0.81 1.61 1.07 2.15 1.85 0.04 4.35 6.29 2.6 15.27 6.28 2.8 0.57 1.92 0.0 3.77 0.03 0.0 0.01 0.48 2.06 0.68 0.76
Zm00001d003743 (GRMZM2G369742)
0.17 0.01 0.01 0.84 1.7 4.35 1.63 3.45 0.67 0.44 1.12 2.07 0.28 0.78 0.92 1.88 0.2 0.6 2.79 0.0 4.02 0.27 4.1 10.35 0.72 0.28 0.27 2.45 1.37 2.05 4.54 0.9 0.08 0.31 0.32 1.49 1.0
Zm00001d006489 (GRMZM2G479045)
1.08 0.08 0.16 0.12 3.83 5.56 8.17 5.35 0.57 0.48 3.77 3.96 0.45 0.62 1.2 1.25 1.27 1.82 1.16 0.41 6.62 4.17 3.02 11.83 4.8 1.84 0.38 0.88 22.15 0.82 3.06 5.53 0.44 0.35 0.54 3.54 5.09
Zm00001d007274 (GRMZM2G025783)
2.07 1.16 4.7 73.87 64.67 57.83 36.11 35.37 38.2 23.79 59.81 86.32 34.97 160.11 53.25 30.92 15.96 22.71 51.48 0.34 79.78 18.78 42.27 176.92 44.89 35.43 7.56 28.2 78.63 76.63 29.76 23.9 9.06 24.52 33.81 54.18 78.35
Zm00001d008812 (GRMZM2G173124)
0.35 0.93 1.52 4.88 16.46 2.49 3.35 23.82 1.37 0.61 0.47 18.31 3.91 20.44 14.14 20.03 17.47 9.06 29.47 0.09 83.3 25.66 4.27 80.08 15.77 16.24 9.83 11.9 31.45 42.04 74.5 7.46 2.29 11.06 2.59 44.38 30.9
18.01 11.19 15.61 82.22 100.03 16.22 7.65 12.33 25.48 29.86 6.16 52.55 36.39 93.3 57.33 16.74 8.39 5.5 31.94 0.22 31.37 11.72 17.46 17.3 9.61 14.14 6.2 14.1 1.37 91.61 6.51 14.57 0.77 3.87 0.89 36.87 34.78
Zm00001d009701 (GRMZM2G128726)
0.11 0.0 0.83 0.0 1.77 0.0 0.0 0.17 0.0 0.0 0.0 0.01 0.34 0.03 0.01 0.85 0.39 0.8 0.12 0.07 2.37 2.84 0.0 3.28 1.5 0.0 0.08 0.08 0.0 0.0 0.02 0.0 0.0 0.01 0.02 0.02 0.01
Zm00001d009960 (GRMZM2G060210)
10.6 0.78 8.47 7.94 14.61 1.55 0.82 5.68 1.72 1.54 1.16 3.28 8.67 14.98 6.84 12.47 8.57 12.75 14.54 0.06 14.8 2.27 1.69 25.06 3.68 5.15 2.15 9.43 6.02 6.31 12.39 0.93 4.44 3.44 0.62 9.48 5.66
Zm00001d010360 (GRMZM2G359924)
0.07 0.0 1.53 1.21 6.1 0.71 0.41 1.87 0.68 0.5 0.24 0.45 0.06 0.55 0.28 1.26 4.23 1.22 0.2 0.0 16.14 3.51 0.34 7.4 9.27 0.03 0.36 0.19 0.0 1.68 0.18 0.0 0.07 0.05 0.08 1.27 0.8
Zm00001d010543 (GRMZM2G178815)
1.79 0.38 3.89 2.53 2.25 0.12 0.57 0.43 0.4 0.01 0.0 0.28 0.62 0.23 0.24 1.72 2.97 1.39 0.06 0.03 1.92 2.79 0.31 2.91 2.6 0.0 0.34 0.29 1.5 0.35 0.27 2.33 0.05 0.36 0.14 0.31 0.19
Zm00001d012712 (GRMZM2G031724)
0.44 0.69 2.89 1.56 14.77 0.0 0.08 0.5 0.03 0.07 0.0 0.45 8.39 2.54 4.85 0.8 23.62 4.38 0.14 0.0 31.89 18.95 1.2 33.83 15.64 2.85 1.06 3.09 0.0 1.75 2.05 0.59 1.1 1.91 9.85 3.17 3.51
Zm00001d016748 (GRMZM2G346837)
0.24 0.06 0.21 5.12 3.59 1.08 0.85 0.34 0.79 0.32 0.35 1.51 0.17 0.94 1.44 0.71 0.33 0.35 0.76 0.01 1.79 1.32 3.11 2.2 0.51 0.46 0.65 0.75 5.88 0.58 1.07 0.78 0.18 0.32 0.39 1.39 1.03
1.55 0.52 0.19 2.26 1.99 2.12 1.55 0.51 0.32 0.25 0.11 1.86 2.38 3.88 1.48 3.57 0.7 1.65 1.45 0.2 4.68 1.19 3.11 8.88 0.78 0.4 1.57 2.4 0.0 1.59 0.5 0.0 0.24 0.53 0.19 1.11 0.65
Zm00001d017616 (GRMZM2G058292)
6.04 3.63 7.44 12.6 16.78 5.24 4.19 9.03 5.67 6.33 0.48 7.22 11.45 19.98 9.32 11.25 14.68 12.66 17.82 0.05 18.39 14.59 7.81 28.28 6.95 8.02 13.59 11.18 0.0 21.87 8.32 8.24 4.72 4.72 6.39 10.29 10.67
Zm00001d017653 (GRMZM2G375153)
0.39 0.08 0.02 0.95 1.11 0.32 0.52 0.7 0.45 0.35 0.2 1.24 0.74 0.92 0.58 0.79 2.04 1.57 0.45 0.0 4.6 0.69 5.31 6.62 1.67 1.32 0.46 0.62 1.37 0.11 1.39 5.85 0.17 0.27 0.43 0.76 1.17
Zm00001d018017 (GRMZM2G351832)
3.2 0.09 0.05 10.23 14.73 2.88 1.54 2.53 0.94 2.38 4.78 7.99 1.42 7.83 2.79 8.45 5.02 2.76 5.66 0.4 14.05 8.83 1.37 14.27 6.08 7.16 0.69 2.82 9.57 6.96 13.17 6.21 3.04 0.53 1.56 5.68 2.54
1.01 1.96 3.16 5.36 9.82 8.36 3.27 6.01 3.93 2.27 2.95 8.61 0.0 0.66 3.98 0.47 0.48 4.91 2.09 0.0 2.13 0.22 15.6 14.35 1.29 4.79 1.66 0.48 19.14 0.46 19.11 4.06 0.38 0.95 1.04 3.26 0.97
Zm00001d020042 (GRMZM2G091857)
6.1 1.13 2.39 22.75 32.09 61.52 46.04 60.48 11.64 8.62 34.0 27.81 1.42 22.85 35.15 19.19 4.97 10.07 18.8 9.0 13.19 1.65 131.71 47.42 4.58 7.41 2.78 3.87 54.7 10.01 24.33 10.99 1.96 2.47 28.26 35.71 47.53
Zm00001d020787 (GRMZM2G165234)
0.08 0.03 0.15 1.8 1.88 0.8 1.14 0.88 0.25 0.09 1.33 1.16 0.28 0.96 0.43 1.2 0.92 0.44 1.55 0.0 2.4 1.1 8.04 4.0 1.05 0.97 0.08 0.55 7.38 0.57 1.88 2.72 0.13 0.14 0.17 0.88 0.88
4.56 0.26 0.56 6.1 7.79 1.49 1.34 0.59 1.5 1.42 0.59 3.18 0.79 5.29 2.99 2.53 0.95 1.16 1.6 0.58 2.69 1.15 7.46 3.03 1.94 1.14 1.26 2.37 6.43 1.82 0.62 1.9 0.42 1.09 4.01 3.23 2.51
Zm00001d021730 (GRMZM5G890190)
20.01 15.03 25.04 40.69 36.08 20.01 21.19 35.01 23.97 26.36 8.88 35.71 45.91 34.46 36.92 31.9 38.66 35.78 40.42 0.04 67.41 58.8 32.02 76.13 41.45 35.49 31.52 31.87 7.79 111.98 31.77 8.54 24.72 15.39 35.65 36.99 39.67
Zm00001d023269 (GRMZM2G180262)
0.06 0.02 0.14 0.12 1.77 0.72 1.07 0.64 0.09 0.29 0.35 0.64 0.0 0.64 0.44 0.16 1.69 1.15 0.44 0.0 1.96 1.78 1.95 4.6 1.48 2.56 1.02 0.96 19.14 0.0 6.02 2.24 0.21 0.9 1.43 0.45 1.2
Zm00001d025133 (GRMZM2G176537)
0.05 0.0 0.54 0.12 0.75 0.0 0.0 0.24 0.0 0.03 0.07 0.05 0.68 0.36 0.21 0.57 0.46 0.19 0.01 0.07 0.19 0.34 0.73 1.89 0.83 0.0 0.0 0.02 0.0 0.0 0.0 0.0 0.0 0.02 0.53 0.2 0.16
13.85 2.87 5.65 20.8 39.85 3.17 3.33 23.37 4.77 4.19 4.86 20.24 11.34 8.2 31.24 11.18 39.52 20.24 10.4 0.05 44.42 65.21 3.9 118.04 64.85 11.75 26.89 11.9 8.61 15.13 16.1 4.51 10.09 23.09 26.2 15.94 6.21
Zm00001d026252 (GRMZM2G091331)
14.56 4.52 11.4 40.13 46.11 12.03 8.77 16.84 8.17 3.73 10.55 12.36 11.51 18.0 15.18 29.21 25.7 19.12 19.3 1.84 64.97 24.8 38.21 72.21 22.17 4.67 7.88 14.56 25.02 19.52 20.81 36.75 5.19 5.4 4.24 19.67 26.17
Zm00001d027341 (GRMZM2G144197)
0.0 0.0 0.01 1.32 3.48 3.01 5.43 0.3 2.21 1.73 2.61 2.48 0.06 0.05 1.19 0.13 1.28 1.61 0.76 0.01 4.63 1.13 8.06 4.91 1.61 0.09 1.88 0.98 0.0 0.0 0.82 1.31 0.11 0.14 0.58 2.43 1.21
Zm00001d028968 (GRMZM2G144997)
0.16 0.11 0.5 2.65 56.32 63.09 12.82 9.94 4.36 3.08 22.73 31.29 0.23 59.91 3.68 28.58 5.6 2.08 4.14 0.07 85.92 1.6 65.97 24.98 6.96 2.03 0.73 5.18 66.46 1.14 58.82 24.43 8.42 2.38 6.98 18.37 27.08
Zm00001d029669 (GRMZM2G395950)
0.28 0.03 0.0 2.4 1.77 0.45 2.67 2.68 1.16 0.41 0.16 0.86 0.11 0.0 1.92 0.45 0.09 1.05 1.02 0.0 0.22 0.2 0.34 7.03 1.52 0.21 0.27 0.44 4.38 0.22 3.32 3.32 0.17 0.25 0.0 0.74 0.77
16.22 2.03 16.3 31.11 21.61 25.34 17.56 41.39 17.87 10.54 8.07 15.57 18.42 82.93 25.89 23.15 24.33 30.74 9.57 2.06 70.12 106.13 38.53 103.68 52.89 32.28 17.86 23.84 103.11 31.02 37.67 31.56 1.83 20.61 8.97 20.98 27.89
Zm00001d032030 (GRMZM2G303149)
2.55 0.76 1.27 2.18 29.93 8.08 3.7 21.9 2.78 2.28 1.43 11.69 28.0 14.75 2.87 8.98 31.06 14.49 19.57 0.16 82.64 13.89 8.63 95.1 22.99 8.51 6.37 24.42 18.05 51.94 50.46 26.17 19.93 3.64 8.06 6.14 11.48
Zm00001d032324 (GRMZM2G097342)
1.44 1.55 2.15 11.59 16.73 6.06 3.38 2.44 3.0 2.32 5.98 7.17 1.19 3.51 5.39 3.71 6.06 3.09 2.96 0.0 6.06 1.85 12.3 19.46 2.5 0.84 1.27 3.17 12.31 2.98 3.93 1.78 2.37 1.57 1.97 4.4 8.34
Zm00001d032654 (GRMZM2G091320)
0.91 0.71 0.14 0.71 3.5 0.55 0.3 0.16 0.43 0.23 0.13 0.46 0.23 0.0 1.1 0.27 0.07 0.69 0.16 0.09 0.0 0.1 0.96 2.16 1.26 0.03 0.33 0.2 0.0 0.0 0.19 0.66 0.04 0.33 0.16 0.55 0.68
Zm00001d035440 (GRMZM2G448607)
46.26 20.94 30.38 150.2 281.16 198.13 118.03 179.58 67.12 46.95 36.7 185.02 50.1 73.44 65.02 113.87 84.08 95.57 134.66 0.82 175.73 36.96 61.79 631.61 65.92 27.4 56.61 67.16 186.38 91.37 147.56 61.0 108.75 17.88 53.14 256.26 1038.34
Zm00001d037632 (GRMZM2G323888)
0.58 0.79 0.02 7.47 11.33 1.9 1.99 49.67 1.0 0.35 1.59 11.87 0.45 0.25 11.09 9.65 9.21 9.24 83.51 3.35 38.63 9.64 33.44 51.91 13.54 1.45 2.46 2.84 11.9 38.38 6.27 9.83 3.01 1.06 1.82 23.86 19.65
Zm00001d038755 (GRMZM2G101457)
26.17 17.0 38.69 85.97 91.64 48.03 49.83 49.46 43.02 31.66 33.59 65.44 35.14 43.21 58.31 58.09 59.89 57.09 139.09 0.44 80.8 72.81 65.18 89.4 68.62 38.47 71.2 36.69 137.69 56.32 26.47 33.24 10.78 28.73 25.89 49.92 38.66
Zm00001d039011 (GRMZM2G318180)
0.97 0.09 1.3 5.58 31.88 5.97 5.2 15.62 2.21 3.42 11.83 12.64 0.11 23.42 1.98 10.96 0.8 0.82 11.3 0.01 22.21 0.11 27.72 11.37 2.85 0.22 0.23 13.08 17.91 3.91 23.04 5.32 15.45 3.98 0.69 3.77 4.29
Zm00001d039408 (GRMZM2G346457)
0.09 0.04 0.16 6.93 4.15 2.67 1.54 1.06 1.02 0.44 2.32 1.81 0.11 0.55 0.86 1.49 0.47 2.81 2.64 0.18 5.41 2.26 2.8 5.73 3.13 6.81 0.18 0.66 17.91 0.92 2.08 2.52 0.49 0.25 1.66 1.19 1.58
Zm00001d039932 (GRMZM2G437097)
0.04 0.14 0.02 0.72 0.59 1.18 1.56 1.71 0.47 0.32 1.36 0.55 0.11 0.25 0.57 1.45 1.48 2.52 0.2 0.18 3.73 1.58 0.79 6.63 3.4 0.34 0.73 2.37 0.0 1.01 0.18 0.47 0.46 1.69 0.47 3.38 0.11
Zm00001d041410 (GRMZM2G022629)
4.85 1.14 2.11 43.4 14.92 19.79 14.95 13.28 9.0 7.9 14.45 11.45 6.46 44.23 14.93 20.35 11.07 10.31 21.17 1.44 37.22 5.35 61.84 59.76 6.33 14.44 6.39 9.47 33.64 7.95 28.57 9.19 1.79 6.07 6.83 15.23 5.04
Zm00001d041604 (GRMZM2G160902)
15.94 7.63 7.88 53.12 67.92 4.75 6.55 6.7 6.49 5.01 1.56 8.0 8.1 20.0 8.41 12.61 26.37 24.64 19.43 0.05 39.46 14.44 5.57 120.28 24.63 9.36 31.75 30.58 27.76 38.2 12.4 29.02 6.4 8.42 3.69 12.76 11.39
Zm00001d042519 (GRMZM2G041930)
3.19 3.65 2.39 0.72 4.44 2.83 0.81 7.79 3.09 3.56 1.31 3.75 7.65 0.12 4.41 3.46 9.92 7.14 1.99 0.01 0.35 5.75 8.83 19.22 6.02 3.49 4.13 7.23 7.52 0.93 4.99 14.29 5.07 6.19 0.48 10.09 7.07
Zm00001d046696 (GRMZM2G033480)
5.8 2.03 0.7 2.87 3.3 0.0 0.0 0.42 0.0 0.0 0.0 0.02 0.79 0.38 0.09 0.76 3.09 1.92 0.09 0.0 1.51 1.59 0.0 8.54 1.63 0.21 1.53 0.26 0.0 0.92 0.9 0.38 0.05 0.25 0.34 0.17 0.63
Zm00001d048230 (GRMZM2G400784)
2.05 1.74 0.46 28.71 10.86 0.02 0.0 1.73 0.0 0.0 0.0 0.03 1.19 3.17 0.19 3.15 3.85 0.69 1.57 0.72 5.89 2.37 0.0 10.93 2.51 0.34 1.64 3.34 7.93 2.04 2.94 0.19 0.07 0.93 0.41 1.14 1.18
Zm00001d048960 (GRMZM2G358791)
7.73 0.2 1.39 1.8 5.2 0.2 0.04 1.41 0.11 0.03 0.24 0.61 2.61 4.22 0.21 3.99 7.77 1.68 0.94 0.5 4.51 3.76 0.8 6.54 4.98 1.12 0.47 0.64 0.0 0.47 1.01 0.62 0.18 0.84 0.22 0.78 0.82
Zm00001d049176 (GRMZM2G009387)
0.04 0.02 0.05 1.21 1.66 0.55 0.83 0.52 0.52 0.1 0.9 0.82 0.06 1.81 0.7 1.02 0.35 0.48 0.73 0.0 6.52 1.15 1.96 2.16 1.09 0.49 0.04 0.23 1.5 0.33 0.81 1.26 0.14 0.32 0.52 0.53 0.69
Zm00001d049647 (GRMZM2G170262)
9.21 16.85 5.72 9.13 11.46 1.59 1.81 6.57 1.79 1.74 4.63 8.46 6.86 8.24 4.84 7.59 16.82 23.99 16.88 1.23 21.79 19.98 0.89 33.82 19.02 8.74 17.4 9.69 8.75 23.19 15.93 12.92 11.55 7.95 3.9 13.49 2.4
Zm00001d050195 (GRMZM2G148561)
0.13 0.05 0.44 13.53 8.76 3.7 0.55 3.07 1.49 0.88 2.28 1.81 1.19 3.97 1.77 4.23 2.08 2.3 0.71 0.0 7.99 1.93 8.15 14.63 1.74 0.5 0.41 1.7 13.4 0.22 8.08 14.15 1.13 0.15 0.2 3.01 4.68
Zm00001d051461 (GRMZM2G028438)
0.39 0.09 0.4 2.87 7.85 0.58 1.06 2.5 0.66 0.37 2.07 3.05 2.61 13.17 3.46 3.17 4.61 4.45 2.76 0.01 11.08 10.29 6.0 27.04 8.53 3.79 1.5 4.12 23.79 12.96 4.21 6.18 0.63 1.99 0.61 2.29 1.33
Zm00001d052482 (GRMZM5G891282)
0.4 0.09 0.22 53.98 3.85 3.94 2.64 6.4 2.18 0.43 0.85 3.79 1.19 5.19 2.7 3.9 2.42 3.16 1.86 0.24 15.7 6.29 1.67 21.83 3.39 1.51 13.15 3.22 24.2 4.85 6.43 6.57 0.97 0.93 0.41 1.64 1.92
0.33 0.26 2.35 5.48 43.75 7.18 2.65 11.94 1.07 0.78 6.62 17.81 0.23 20.1 2.12 15.01 16.99 3.29 16.76 1.44 42.02 8.93 10.11 44.89 10.19 3.51 0.46 5.71 46.63 19.19 67.23 99.13 10.14 2.56 5.21 4.82 5.96
Zm00001d053910 (GRMZM2G042602)
0.19 0.31 0.28 1.92 2.08 4.34 2.87 1.88 1.69 1.24 1.53 2.18 0.23 0.35 1.04 1.94 2.06 1.08 1.68 0.06 5.04 0.76 7.96 8.16 1.74 0.28 0.22 0.65 4.79 2.06 3.3 5.35 1.1 0.37 1.98 1.74 1.49

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)