Heatmap: Cluster_313 (HCCA cluster)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Root (elongation zone)
Root (meristematic zone)
Root (stele)
Root (tip)
Root
Leaf (3rd leaf of seedling)
Leaf (3rd leaf)
Leaf (apex)
Leaf (bundle sheath)
Leaf (mesophyll)
Leaf (Seedling)
Leaf
Internode
Stalks
Shoot
Shoot (apex)
Tassels (primordia)
Tassels
Anther
Pollen
Ear (immature)
Ear (inflorescence)
Ear (leaf)
Ear (primordia)
Ear
Silks
Kernels (germinating)
Kernels
Maternal transfer zone
Nucellus
Embryo
Endosperm (transfer layer)
Endosperm
Seeds
Coleoptyle (5 day)
Seedling
Whole Plant
Zm00001d002873 (GRMZM2G157207)
-2.83 -1.67 -1.21 -1.1 -1.36 0.85 0.82 0.49 1.54 1.62 0.97 1.36 -1.25 -0.58 1.49 -0.49 -0.7 -1.34 -1.05 -8.59 -0.4 -0.56 0.13 -1.24 0.34 -0.37 -0.67 -2.64 -2.74 -1.93 -0.01 -1.96 -3.2 -2.02 1.47 1.02 0.08
Zm00001d005457 (GRMZM2G346757)
- - -9.73 - -6.33 2.18 2.57 1.42 1.96 1.62 0.71 1.91 -3.91 -2.79 1.54 -3.83 -5.28 -2.15 -3.31 -8.99 -4.28 -2.61 1.75 -5.36 -2.08 -0.65 -5.0 -5.04 -2.64 -9.13 -3.39 -2.97 -6.17 -4.4 -1.13 0.85 -0.51
-3.29 -4.43 -4.81 -1.06 -2.77 2.19 1.98 0.89 1.43 1.28 0.51 1.66 -1.35 -0.53 1.07 -0.95 -2.04 -1.38 -0.67 -2.17 -0.51 -1.89 1.83 -0.86 -1.15 -1.53 -2.79 -1.91 - -1.58 -1.64 -1.73 -2.06 -3.58 -3.07 0.63 0.76
Zm00001d010248 (GRMZM2G084274)
-1.98 -1.73 -1.02 -0.73 -1.01 1.45 0.94 0.53 0.78 0.87 0.42 1.27 -0.71 -0.49 0.5 -0.44 -0.15 0.9 -0.6 -0.45 -0.16 0.56 -0.14 -0.02 0.52 -1.11 -0.72 -0.55 -2.52 0.49 -1.78 -1.8 -1.23 -0.86 -0.89 0.72 0.09
-2.96 -1.51 -2.11 -0.58 -1.19 1.0 0.75 0.88 0.79 0.99 1.08 1.29 -1.65 -1.68 1.05 -1.37 -1.0 -0.67 -0.25 -6.04 -1.3 -2.35 1.66 -0.55 -0.4 -0.7 -0.47 -1.84 -1.19 -0.22 -1.22 -2.49 -2.53 -1.84 2.0 0.71 0.58
-2.26 -1.42 -1.55 -2.05 -0.93 1.2 1.15 0.4 1.2 1.24 0.65 1.52 -0.73 -1.35 0.36 -0.97 -0.69 -0.28 -0.36 -9.18 -0.85 -0.89 0.51 -1.11 0.24 -0.67 -0.34 -1.91 -2.04 -0.4 -0.67 -4.02 -2.75 -2.32 2.13 0.81 0.41
Zm00001d011585 (GRMZM2G006121)
-3.52 -4.36 -1.88 -3.64 -2.35 1.38 1.29 1.41 0.58 1.06 0.79 1.29 -1.2 0.26 1.27 -1.19 -1.84 -1.43 -1.91 -7.51 -2.65 -1.85 0.79 -2.32 -0.58 0.77 -1.52 -1.81 - -0.73 -1.65 -2.44 -1.31 -1.08 2.25 0.9 0.58
Zm00001d012205 (GRMZM2G068271)
-5.16 -3.61 -2.37 -3.76 -2.87 2.28 2.63 0.82 1.34 1.35 0.39 1.48 -2.16 -2.8 0.61 -2.28 -1.95 -0.93 -0.53 -4.33 -1.95 -1.99 0.97 -2.37 -0.11 -0.5 -1.85 -2.19 -0.66 -1.14 -0.49 -2.16 -2.78 -1.99 -0.08 0.88 -0.2
Zm00001d012646 (GRMZM2G111501)
-9.64 -8.84 -5.2 - -4.2 1.44 1.61 1.16 1.94 2.14 0.22 2.09 -4.51 -1.91 1.45 -3.25 -5.37 -2.17 -3.1 -6.12 -4.71 -3.08 1.4 -4.6 -1.09 -1.84 -2.88 -2.78 - -3.25 -3.95 0.58 -2.86 -3.04 0.57 1.54 0.61
Zm00001d013455 (GRMZM2G068963)
-11.67 - -9.13 -3.93 -7.93 1.79 1.99 1.04 2.51 2.28 0.71 2.26 -2.61 -2.97 1.92 -3.0 -4.13 -1.76 -1.78 -4.02 -2.97 -3.29 0.11 -3.67 -1.97 -2.16 -6.26 -5.08 - -7.21 -6.18 - -7.85 -5.38 -0.52 1.06 -0.29
Zm00001d013799 (GRMZM2G062470)
-4.42 -5.41 -4.34 -1.62 -2.98 2.15 1.48 1.3 1.07 1.25 -0.86 1.88 -0.79 -0.45 1.31 -1.6 -1.19 -0.93 -0.76 -12.4 -0.21 -0.88 1.02 -0.26 -0.94 -0.57 -1.2 -2.27 - -0.65 -3.51 - -4.62 -2.94 -0.5 1.28 1.15
Zm00001d014704 (GRMZM2G089119)
-5.15 -8.28 -8.67 -5.38 -6.11 1.14 2.58 1.4 2.01 2.07 0.29 1.69 -4.43 -7.65 1.79 -6.97 -6.08 -2.24 -4.45 -8.14 -5.48 - 2.31 -4.97 -4.59 -1.43 -6.13 -4.3 - - -6.68 -3.34 -6.93 -5.84 -1.46 1.58 -0.63
Zm00001d015651 (GRMZM5G849107)
-2.31 -2.91 -1.75 -1.19 -1.61 2.06 1.98 1.35 1.19 1.3 0.76 1.35 -0.56 -0.73 0.8 -1.06 -2.88 -1.45 -1.14 -3.29 -2.01 -2.29 2.05 -1.8 -0.99 -1.17 -0.88 -2.28 -1.63 -2.42 -1.95 -2.54 -4.03 -2.75 0.38 0.45 0.0
Zm00001d016863 (GRMZM2G421231)
-5.67 -3.47 -5.44 - -4.32 1.88 2.38 1.51 1.66 2.05 1.11 1.6 -2.34 - 1.19 -3.04 -1.99 -2.2 -0.81 -3.97 -2.39 -1.83 0.73 -1.49 -0.92 -2.79 -2.15 -2.9 - -0.72 -2.22 - -3.88 -3.37 0.57 0.96 -0.09
Zm00001d017092 (GRMZM2G106061)
-6.16 -4.56 -4.6 -3.76 -4.47 1.63 2.14 1.89 1.75 1.92 1.05 1.8 -2.09 -2.59 1.09 -3.69 -3.23 -2.19 -1.68 -9.74 -3.17 -3.31 1.54 -3.0 -0.92 -1.92 -2.83 -4.01 -5.29 -3.15 -3.61 -6.85 -4.8 -4.2 0.9 1.04 0.18
Zm00001d017659 (GRMZM2G126580)
-4.16 -3.53 -3.46 -0.89 -2.49 1.04 0.8 0.46 1.25 0.92 -1.3 1.46 -0.88 -0.63 1.24 -1.24 -0.59 -0.53 0.51 -5.6 -0.4 -1.16 2.58 -0.54 -0.28 -1.66 -0.94 -1.71 -3.12 0.58 -2.22 -2.64 -2.44 -2.4 0.64 0.94 -0.02
Zm00001d018464 (GRMZM2G079782)
-3.15 -4.63 -4.08 -1.53 -3.42 2.15 1.75 1.48 2.12 2.01 -0.62 1.25 -0.74 -0.86 1.2 -1.29 -1.48 -0.93 -1.55 -10.57 -1.74 -0.63 -0.12 -1.25 0.05 0.4 -2.54 -3.33 -4.59 -2.31 -3.88 - -6.13 -4.36 -0.46 1.04 0.31
Zm00001d018810 (GRMZM2G129246)
-9.22 - -7.7 -3.94 -3.92 1.95 1.76 1.4 1.62 1.38 2.01 2.2 -7.84 -3.37 1.39 -6.4 -12.65 -1.63 -3.39 -11.58 -9.52 -11.05 1.74 -11.09 -1.09 -1.29 -3.66 -6.03 - -8.94 -5.17 - -7.28 -4.59 -1.72 1.43 1.12
Zm00001d021242 (GRMZM2G052893)
-4.21 -2.39 -3.15 -4.52 -2.36 1.88 1.47 1.47 1.82 2.0 1.89 1.4 -1.55 -3.16 1.18 -1.63 -1.85 -1.52 -1.47 -6.96 -2.72 -2.67 0.41 -1.99 -0.57 -1.58 -1.76 -2.84 -3.6 -1.57 -0.81 -5.14 -4.35 -2.78 1.09 0.96 -0.58
Zm00001d021340 (GRMZM2G148864)
-5.34 - -7.6 -5.3 -6.44 1.9 1.94 1.47 1.45 1.6 1.05 1.76 -3.39 -1.08 0.95 -2.98 -2.31 -0.86 -1.28 -7.77 -1.13 -2.06 1.54 -3.39 0.08 0.14 -5.39 -3.22 -1.12 -1.47 -2.4 -5.97 -5.32 -4.47 0.36 1.02 0.24
Zm00001d021595 (GRMZM2G048591)
-6.93 -5.56 -6.52 -3.82 -4.38 2.65 2.5 1.23 1.18 0.95 -0.11 1.54 -1.61 -0.74 1.07 -2.18 -1.76 -1.49 -1.3 -5.35 -0.58 -1.8 0.85 -0.86 -1.68 -0.36 -3.69 -2.09 -4.3 0.46 -3.28 -1.83 -2.31 -2.89 -2.79 0.95 0.32
Zm00001d023888 (GRMZM2G149534)
-1.46 -1.92 -1.3 -0.98 -1.8 1.4 0.63 0.75 1.43 1.49 0.04 0.96 -0.27 -0.69 0.91 -0.75 -0.02 -0.9 -1.39 -5.28 -1.19 0.63 0.58 -0.4 0.33 -0.63 -0.1 -1.47 -0.02 -1.48 -1.58 -0.51 -1.61 -1.43 1.05 0.4 0.07
Zm00001d027298 (GRMZM2G114469)
-2.67 -2.8 -0.97 -0.68 -1.52 1.99 1.39 1.13 0.75 1.38 -0.05 1.74 -1.32 -0.02 0.9 -1.43 -1.71 0.29 -1.62 -1.51 -1.4 -1.99 1.33 -1.96 -0.61 0.63 -1.89 -2.92 -4.88 -0.41 -3.94 - -4.66 -2.94 0.28 1.14 0.65
Zm00001d028298 (GRMZM2G012126)
-1.48 -2.15 -1.79 -1.22 -1.37 1.37 1.37 0.96 1.69 1.73 -1.14 1.55 -0.9 -0.75 1.02 -1.25 -1.24 -0.35 -0.61 -2.59 -0.99 -1.02 0.3 -1.2 -0.97 -0.67 -0.87 -0.87 -1.05 0.19 -1.14 -1.08 -0.79 -1.51 -0.19 1.07 0.4
Zm00001d029396 (GRMZM2G090018)
-7.62 -4.67 -4.41 -4.08 -2.6 2.27 2.41 1.58 1.46 1.41 1.56 1.46 -4.76 -1.71 0.72 -1.84 -3.87 -2.07 -1.5 -9.2 -3.79 -4.41 1.8 -4.63 -1.15 -1.12 -2.21 -4.14 -3.03 -2.42 -2.88 -5.12 -5.46 -4.46 0.06 0.97 0.22
Zm00001d031496 (GRMZM2G016088)
-7.94 -2.83 -5.27 -4.37 -3.95 1.95 2.24 1.21 1.59 1.62 0.55 1.57 -2.76 -1.86 0.57 -2.39 -3.54 -1.51 -2.54 -11.8 -2.51 -3.52 2.27 -2.15 -0.71 -0.48 -2.07 -2.92 -1.66 -4.11 -4.01 -1.28 -2.85 -2.07 0.43 0.69 0.47
Zm00001d031514 (GRMZM2G157350)
- - -9.83 -5.52 -8.45 2.22 2.07 2.06 1.74 1.64 0.51 1.46 -4.47 -2.47 1.93 -3.41 -5.69 -2.53 -3.06 -3.08 -3.07 -3.38 1.63 -5.58 -1.23 -1.06 -6.06 -4.82 -3.33 -7.63 -4.56 -1.68 -4.43 -5.09 -0.25 1.04 0.09
Zm00001d033038 (GRMZM2G080355)
-8.44 -9.68 -6.81 -4.33 -4.02 2.46 2.16 1.81 1.72 1.95 0.87 1.78 -4.73 -2.36 1.9 -3.05 -3.88 -2.09 -2.59 -14.31 -3.27 -4.72 -0.81 -3.65 -1.25 -1.47 -3.89 -4.47 -4.02 -8.4 -2.66 -7.03 -4.43 -5.27 -0.94 1.2 0.71
Zm00001d033077 (GRMZM2G152419)
-4.91 -3.85 -2.4 -1.15 -1.91 1.86 1.67 1.51 0.96 0.96 -1.81 1.38 -1.2 -1.3 0.61 -0.51 -0.17 -0.21 0.29 -9.9 0.32 -0.0 0.47 0.98 -0.52 -0.8 -1.67 -1.29 -3.44 -0.5 -2.87 -3.7 -1.78 -2.34 -0.55 0.93 0.87
Zm00001d033717 (GRMZM2G025648)
-10.84 -8.64 -8.87 -9.1 -7.95 2.15 2.09 1.34 2.0 1.81 1.47 1.99 -3.26 -3.02 1.13 -3.25 -3.77 -2.1 -0.73 -8.08 -2.32 -4.59 1.48 -3.7 -0.66 -4.64 -3.27 -5.95 - -6.2 -6.23 -7.76 -6.69 -7.05 -1.05 1.3 0.23
Zm00001d034007 (GRMZM2G011373)
- - -9.37 - -9.46 2.3 1.6 1.52 2.12 2.05 1.57 1.96 -5.65 -3.53 1.68 -6.33 - -2.47 -3.82 - -9.42 - 0.74 - -2.38 -4.05 -5.69 -7.25 -6.22 -8.85 -10.06 - -8.51 -9.32 0.25 1.42 0.54
Zm00001d034857 (GRMZM2G022248)
-1.35 -1.17 -1.29 -2.43 -1.13 1.39 1.79 0.61 1.75 1.32 0.27 1.44 -1.16 -2.18 1.28 -1.16 -2.16 -1.22 -0.82 -4.68 -1.71 -2.07 1.59 -1.59 -0.62 -0.66 -0.14 -0.96 0.27 -1.1 -2.04 -1.94 -1.92 -1.63 0.11 0.95 -0.84
Zm00001d035081 (GRMZM2G175989)
- - -8.53 -7.45 -8.02 1.73 2.24 1.41 2.5 2.33 0.89 2.22 -7.51 -3.25 0.83 -5.77 -5.72 -2.6 -3.64 -12.96 -5.75 -5.75 1.59 -8.19 -2.42 -4.1 -7.46 -5.51 - -5.34 -8.04 -8.45 -5.33 -6.56 -1.5 1.07 0.11
Zm00001d035092 (GRMZM5G878823)
-5.55 -4.32 -3.06 -3.36 -3.95 1.64 1.49 1.4 1.67 1.88 0.72 1.6 -1.25 -1.05 1.21 -1.68 -1.66 -1.03 -1.04 -9.68 -1.21 -1.01 0.96 -1.81 -0.43 -0.77 -1.49 -2.12 -2.25 -1.67 -2.71 -3.89 -2.8 -2.87 1.05 1.14 0.44
Zm00001d038542 (GRMZM2G117558)
-2.34 -4.4 -5.59 -2.18 -3.05 2.27 1.61 1.02 1.53 1.52 -0.37 1.34 -0.82 0.07 1.83 -2.33 -3.5 -1.56 -1.83 -1.73 -1.63 -3.39 2.38 -1.17 -1.06 -1.0 -4.13 -3.36 -2.84 -7.88 -7.64 -6.56 -4.49 -4.28 0.32 0.61 -0.34
Zm00001d038606 (GRMZM2G014099)
-8.82 - - - -7.4 1.33 1.18 0.55 2.16 2.15 1.23 2.06 -2.46 - 2.02 -5.91 - -2.11 -2.35 -9.17 -6.65 -5.49 1.7 -9.91 -2.44 -0.98 -7.94 -5.19 - - -8.43 -5.62 -4.89 -4.72 1.21 1.33 0.77
Zm00001d039070 (GRMZM2G145527)
-5.66 -3.27 -2.45 -3.96 -3.78 1.25 1.35 1.05 1.71 1.84 0.76 1.46 -2.14 -2.7 1.26 -2.26 -1.38 -0.92 -1.49 -1.27 -1.05 -0.88 -0.46 -2.26 -0.14 1.05 -1.16 -2.33 -0.73 -3.0 -0.38 -6.31 -2.7 -1.8 0.27 1.39 1.18
Zm00001d039076 (GRMZM5G846343)
-3.47 -2.55 -1.81 -3.96 -2.52 1.85 1.63 0.52 1.62 1.81 -0.72 1.43 -1.02 -2.48 1.3 -1.49 -1.0 -1.28 -1.12 -6.08 -0.62 -1.86 -0.46 -1.24 -0.32 -1.01 -1.21 -2.0 1.03 -1.07 -1.74 0.21 -2.23 -1.51 0.65 1.28 -0.45
Zm00001d040242 (GRMZM2G134182)
- - - -7.36 -7.1 1.59 2.33 2.09 1.62 1.69 0.72 1.96 -4.42 -4.33 1.26 -4.07 -4.23 -1.62 -2.74 -11.87 -4.4 -7.09 1.8 - -2.1 -1.02 -5.91 -5.27 -3.83 -5.83 -2.45 -4.98 -3.35 -3.8 0.72 1.14 0.21
- -8.7 -5.29 - -7.41 2.06 1.94 1.82 1.73 1.8 0.73 2.32 -5.86 - 1.15 -6.27 -5.84 -2.5 -2.75 -7.9 -5.91 - 2.36 -3.5 -2.04 -7.74 -5.27 -4.38 - -5.89 -6.7 -1.92 -3.56 -5.93 -0.91 0.66 0.44
Zm00001d042144 (GRMZM2G366622)
-9.52 -8.66 -8.19 -4.84 -6.42 0.02 0.87 1.37 1.76 1.62 0.16 1.57 -1.55 0.26 1.0 -2.88 -2.98 -1.14 -1.15 -9.09 -2.97 -5.4 2.66 -1.82 0.49 -1.56 -5.03 -3.46 - -6.43 -1.94 -3.85 -2.27 -1.75 2.2 0.73 -0.9
Zm00001d043707 (GRMZM2G159924)
-6.19 -3.21 -3.74 -2.11 -3.68 1.13 1.36 0.64 0.72 1.03 1.23 1.3 -2.65 -2.72 1.07 -2.41 -1.11 -1.14 -1.2 -9.9 -1.73 -2.09 2.28 -1.93 -0.75 -0.97 -0.87 -2.4 - -0.24 -1.12 -3.92 -3.09 -2.09 2.47 1.06 -0.21
Zm00001d045144 (GRMZM2G300408)
-6.34 -4.87 -3.93 -1.96 -2.63 1.41 1.1 1.17 1.49 1.5 0.77 1.43 -1.22 -0.75 1.02 -1.37 -1.23 -1.17 -0.88 -8.26 -0.41 -1.32 0.34 -0.68 -0.31 -0.56 -2.84 -1.24 0.52 -0.53 -1.43 0.19 -1.33 -1.93 0.81 0.84 0.68
Zm00001d048441 (GRMZM2G479000)
-5.26 -5.8 -9.87 -6.41 -4.32 0.74 0.49 1.04 1.41 1.35 0.35 1.49 -0.63 -0.76 1.82 -1.74 -2.37 -1.54 -0.99 -10.96 -1.29 -0.42 2.65 -1.82 0.01 -1.01 -3.76 -2.38 -0.66 -1.29 -3.26 -1.4 -4.23 -2.43 0.78 0.7 0.81
Zm00001d052163 (GRMZM2G079353)
-5.02 -3.31 -2.64 -2.51 -2.18 1.25 1.92 1.11 1.49 1.58 0.64 1.68 -0.67 -1.58 0.89 -1.3 -1.58 -1.18 -0.7 -7.56 -1.56 -1.48 1.55 -2.63 -0.29 -1.01 -0.66 -1.71 -1.71 -1.18 -0.93 - -2.15 -1.94 0.91 0.95 0.25

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.