Heatmap: Cluster_187 (HCCA cluster)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Root (elongation zone)
Root (meristematic zone)
Root (stele)
Root (tip)
Root
Leaf (3rd leaf of seedling)
Leaf (3rd leaf)
Leaf (apex)
Leaf (bundle sheath)
Leaf (mesophyll)
Leaf (Seedling)
Leaf
Internode
Stalks
Shoot
Shoot (apex)
Tassels (primordia)
Tassels
Anther
Pollen
Ear (immature)
Ear (inflorescence)
Ear (leaf)
Ear (primordia)
Ear
Silks
Kernels (germinating)
Kernels
Maternal transfer zone
Nucellus
Embryo
Endosperm (transfer layer)
Endosperm
Seeds
Coleoptyle (5 day)
Seedling
Whole Plant
Zm00001d002013 (GRMZM2G363066)
- - - 3.81 2.73 0.22 0.18 - -0.42 0.38 -0.26 -0.72 - -1.54 0.11 -4.75 - -1.78 -1.69 - - - -1.5 1.13 -1.36 - - -2.98 - - -0.55 - -3.98 -2.1 0.55 0.9 0.11
Zm00001d002203 (GRMZM5G899582)
- - - - 5.11 - - - - - - 1.36 - - - - - - - - - - - - - - - - - - - - - - - - -
2.25 -0.12 -3.91 -0.45 3.44 -1.28 -1.27 -1.0 -1.81 - -0.87 -0.08 - - -0.59 -3.26 -2.55 -1.76 -1.89 -3.31 -5.33 0.7 0.25 - -0.44 1.39 -0.36 -1.94 - 2.21 -0.24 -0.49 -6.16 -0.87 -1.39 -0.9 -3.4
Zm00001d003865 (GRMZM2G032225)
1.17 -4.71 -0.45 2.94 3.56 - -7.51 - 1.01 -1.2 - -0.86 -6.4 -6.03 -0.54 0.38 - 1.15 -0.4 -9.2 - - - - -5.26 -1.5 -3.02 -8.56 - - - - - -6.39 -0.1 1.82 0.61
Zm00001d004288 (GRMZM2G050937)
- - - 2.61 3.08 - - - - - - -4.98 - - -2.05 -0.86 1.11 - 0.06 -1.25 2.33 1.51 - 0.6 - - 2.57 -1.29 - - - - - - -3.56 1.14 -
-4.38 - -1.21 -0.15 2.06 - - - - - - -2.63 - - -3.94 0.17 - -1.35 1.36 1.84 - - 2.28 - - 3.16 - -0.92 - 2.57 -1.43 - -3.67 -2.96 1.4 -2.99 -
Zm00001d006503 (GRMZM2G026532)
-3.22 -4.63 -2.99 -0.66 1.29 -4.54 -2.32 - - - -1.23 -2.84 -3.05 -3.33 -4.45 -0.16 -2.56 0.15 -3.46 2.63 -2.65 -1.56 - -4.53 -1.1 -2.45 -0.66 -0.44 3.55 -0.71 1.26 2.33 -0.41 -1.27 - -1.43 -1.82
Zm00001d007623 (GRMZM2G124921)
- - - - 4.39 - - - - - - -4.08 - - 0.22 1.99 - - - - - - - - - - - - - - - - - - - - 3.44
Zm00001d008837 (GRMZM2G070109)
-8.23 - 0.85 2.27 3.57 -7.38 -5.18 -6.38 -6.82 -7.09 -5.14 -3.61 - -5.29 -2.06 -2.37 -3.09 0.74 3.66 -9.44 - - -3.46 - -5.27 - -6.08 -2.81 -0.46 - - - -1.78 -4.22 -3.92 0.05 0.06
1.76 - -1.49 3.34 3.08 -1.41 -0.67 -2.66 - - -1.6 -3.43 -2.26 -3.48 -2.35 -1.62 0.95 0.49 -1.11 -2.47 -4.96 -0.24 - -1.24 -1.1 -1.3 -3.28 -4.3 - 1.09 -2.26 -0.51 -6.87 -3.84 -2.05 0.98 -0.61
Zm00001d010265 (GRMZM2G096029)
- - -3.34 0.94 3.36 1.74 -0.28 -3.31 -1.49 -0.94 -1.03 0.08 - - -0.04 -3.37 -2.89 2.38 1.18 -7.03 -3.3 -2.51 - -2.38 -1.85 -1.31 - -2.86 - - -1.83 - - -3.68 -0.06 1.69 1.82
0.15 - 2.56 3.37 3.69 -1.41 -3.76 - -1.97 -2.16 - -3.14 - -2.93 -3.78 -1.41 - -3.66 0.6 - -6.5 - - - -2.9 -1.69 - -2.33 - - - - - -1.97 -3.76 0.95 -0.66
Zm00001d011679 (GRMZM2G455124)
- -5.82 - -2.66 1.82 1.1 -4.48 - -5.23 -4.63 0.53 -0.02 0.74 3.23 -1.71 -1.74 -6.77 -3.06 -5.18 -8.6 -1.24 -1.23 3.09 -1.06 0.99 0.0 -1.86 -1.24 - -3.72 -1.28 - -3.21 -0.54 -3.76 0.11 -0.29
- - - 2.28 2.68 -5.26 - - - - - -1.66 - -0.74 0.61 -4.52 - 2.14 -0.6 -3.34 -6.18 - - - 0.47 - 3.68 -1.78 - - - - -1.69 -0.33 -1.79 0.89 -1.57
Zm00001d014099 (GRMZM2G454334)
- -0.8 - - 4.43 - - - - - - -6.72 - - - -5.32 - - -2.44 - - - - - - - - - - - -0.3 1.62 -3.22 -4.57 - 0.31 3.22
Zm00001d014329 (GRMZM2G012933)
-1.53 -0.81 -0.62 4.1 3.22 -3.92 - - -3.37 - - -2.65 - - -2.54 -3.14 - -2.29 -1.7 -5.03 -3.95 - -2.33 - -4.06 - -2.17 -0.58 2.13 - -3.01 -1.54 -2.04 -1.74 -2.93 -0.72 -0.91
Zm00001d014682 (GRMZM2G330012)
-4.81 - -2.14 3.04 3.67 -2.88 -0.14 -1.83 -2.71 -2.43 -2.76 1.1 - 1.69 0.54 -2.99 - 1.7 -4.42 -4.69 - -3.4 - -2.44 -3.77 -2.09 -3.92 -3.45 - - - - -5.33 0.48 -2.85 0.13 -1.59
Zm00001d017571 (GRMZM2G089396)
- - 0.48 4.47 1.89 -5.34 - - - - - -5.1 -2.68 2.25 -5.64 0.89 -2.36 - -3.84 -7.26 -1.26 - - -2.41 -4.23 - - -5.3 - -1.61 -3.21 - -6.77 - - -1.68 0.18
Zm00001d017834 (GRMZM2G180926)
-5.38 -5.94 2.16 3.61 2.58 -5.68 -6.72 -5.31 -0.4 -2.28 - -0.87 - 0.81 -1.21 -1.77 -1.34 -2.1 -2.41 -5.47 -2.95 -3.23 - - -4.32 -2.07 -1.16 -0.44 - -3.98 -4.44 -0.58 0.27 -0.91 0.77 1.22 0.23
Zm00001d018710 (GRMZM2G337402)
0.16 3.76 -1.78 3.36 2.86 - - - - - - -4.07 - - -3.5 -6.1 - - - 1.19 - - - - - - -0.75 - - - -3.52 - -5.77 -2.09 -0.65 -3.15 -1.44
Zm00001d018711 (GRMZM2G369266)
- 2.15 0.06 2.33 4.24 - - -1.07 -2.21 - - -5.98 - - -4.49 -4.0 - - - -0.12 - - - -2.24 -3.0 - - - - - 1.55 - -4.79 - -1.75 0.11 0.19
Zm00001d018855 (GRMZM2G398996)
-6.28 - -0.39 4.69 2.84 -3.16 -3.75 - - -5.35 - -3.39 - - -2.41 -1.73 - -4.05 -4.37 - - - -2.46 - - - - - - - - - -6.29 -4.2 -8.64 -0.44 0.49
- - - - 4.66 - - - - - - - - - - 2.76 - - - - - - - - - - - - - - - - 2.3 - - - -
Zm00001d021214 (GRMZM2G018138)
- - -4.08 0.92 2.78 - -1.61 - 1.59 2.57 - -0.36 - - 1.82 -1.52 - 1.27 -6.68 - - -1.76 - - -1.69 - - -2.98 - - -1.33 - -3.29 -5.26 2.66 1.81 -0.39
Zm00001d021286 (GRMZM2G091919)
-2.4 - 0.44 3.41 3.57 - - -5.66 - - - -7.24 0.14 -4.4 -3.33 -1.38 0.49 -1.57 -7.14 -3.94 1.64 -0.16 - 1.05 0.02 - - -0.75 - - -5.89 - -0.65 -1.89 -2.2 -2.3 -1.28
Zm00001d024512 (GRMZM2G068808)
-0.7 0.11 0.85 2.88 1.1 -0.45 -0.75 -0.46 -1.31 -1.17 -1.4 -0.63 -0.5 0.15 -0.7 0.39 0.82 0.26 -0.29 -2.3 -0.71 -0.71 -0.45 0.16 -0.33 -0.91 0.1 -0.32 -1.33 -0.48 -0.1 -3.4 -1.3 0.19 -1.33 0.08 -0.14
-6.48 -1.39 0.33 4.54 2.87 -3.89 -3.79 -7.37 -2.2 -1.31 - -2.91 - - -4.39 -2.62 0.64 - -6.81 -8.45 -7.85 - - - -4.04 -5.47 -0.39 -8.92 - - -4.57 - -6.82 -9.41 -1.1 -0.89 -3.36
Zm00001d024515 (GRMZM2G007698)
-0.36 1.11 0.59 4.73 2.08 - - - - - - - - - -9.66 -1.59 - - -7.03 - - - - - - - -0.17 -7.38 - - -4.03 - -6.18 -5.71 -3.93 -1.8 -3.66
Zm00001d025383 (GRMZM2G098037)
- - -0.42 1.58 3.81 - -2.24 - - - 0.17 -1.27 - - -0.72 -1.24 - - - - - - 1.35 - - - - 2.51 - - - - 1.71 2.12 - -0.69 -
Zm00001d025388 (GRMZM2G471596)
- - 2.9 - 4.68 - - 0.31 - - - -1.82 - - -2.52 1.01 - - - - - - - - - - - - - - - - - - - -2.41 -
Zm00001d025703 (GRMZM2G111462)
-2.54 -5.46 -4.84 2.52 1.63 - -3.44 -5.77 - -5.33 -4.02 -3.29 - - -1.39 -1.96 - 0.75 1.04 -7.68 -4.83 - 0.43 - -0.65 - - 2.11 2.37 1.62 0.47 -0.85 0.6 2.21 -5.21 -2.19 -1.56
Zm00001d026102 (GRMZM2G094860)
- - 2.28 4.03 3.64 - - - - - - -5.19 - - -5.37 -4.05 - - -5.25 -0.36 - - - - -2.8 - - -3.04 - - -1.36 -0.82 - -5.56 -4.04 -1.46 -0.33
Zm00001d027501 (GRMZM2G092916)
- 0.22 -0.53 - 2.21 - - - -1.25 - - 0.8 - - -1.0 -1.29 - -2.26 -2.62 -2.47 - - - - -1.69 4.49 - -5.35 - - -1.12 - 1.24 0.01 -2.8 -3.81 -
Zm00001d028260 (GRMZM2G050514)
0.63 -4.27 -2.66 3.7 2.68 -0.62 -0.69 0.32 -0.11 -0.83 -0.76 0.05 -1.42 0.7 -1.11 -0.17 -8.07 -4.56 -6.0 -11.51 -6.2 -7.55 -1.17 -6.31 -3.42 -5.3 0.46 -1.14 0.53 -1.49 -6.22 -1.47 -5.5 -1.5 -2.77 -0.21 -0.34
Zm00001d028694 (GRMZM2G042543)
- - -2.13 4.06 3.87 -4.75 - - - - - -8.13 - - - -2.97 - 0.42 - -0.58 - - 0.96 - -5.13 - - - - - - - - -5.23 -4.38 -4.77 0.21
Zm00001d028879 (GRMZM2G038015)
-2.5 0.07 -1.85 1.59 4.65 - -4.75 - - - - -2.31 - - -3.26 -2.33 - - -3.13 - - - - - -3.17 - -3.09 -1.2 - - - 0.58 -3.86 -1.5 - 0.4 1.48
Zm00001d029274 (GRMZM2G040638)
-6.16 - -3.15 4.14 3.89 -4.33 -5.96 - - - -5.31 -5.13 - -3.84 -4.14 -5.14 - -5.77 -8.93 -8.64 - - - - -7.92 - -0.34 -6.51 - - - - -7.07 -4.43 -6.49 1.08 0.2
Zm00001d029677 (GRMZM2G049852)
- - - 3.55 2.99 -3.68 -2.03 - - - - -1.07 - - -3.81 -6.23 - - -4.56 -5.74 - - 3.08 -1.57 - - - - 2.24 - -2.94 - - - -5.02 1.3 -2.01
Zm00001d031094 (GRMZM2G091278)
- - 1.41 1.97 3.69 -2.67 - - - - - -7.66 - - -2.82 -3.22 - - 1.38 -2.5 - - - -3.24 -3.39 - - 0.96 - 0.37 2.88 - -0.54 -0.37 - 0.24 -0.19
Zm00001d032342 (GRMZM2G154114)
- - -0.11 3.52 1.91 -3.89 -3.82 - -1.04 - - -2.34 - 0.93 -0.09 -0.2 - -0.79 -2.46 - 0.47 0.72 - -3.09 0.68 - - -0.7 2.57 - -3.59 - 1.22 -3.98 -0.43 -0.35 -2.21
Zm00001d032885 (GRMZM2G115909)
2.99 - -5.77 4.33 2.72 - - - - - - -6.52 - -2.32 - -6.04 - - -3.86 -6.21 -3.28 - - - - - - -6.61 - - - - - - - 0.63 -1.32
-0.9 -7.06 0.89 4.61 3.01 - -6.38 - - - - -3.2 - - -4.71 -3.45 - - - -5.22 - - - - - - -0.61 -11.33 - - -8.32 - - -2.86 -2.9 -0.7 -1.79
Zm00001d035055 (GRMZM2G313184)
- - 0.74 4.0 3.13 -2.33 -4.19 -2.68 -2.7 -3.56 -0.63 -2.09 - 2.17 -2.27 -1.03 -8.18 -3.48 -9.82 - - - 0.17 - -4.25 - - -10.51 -3.07 - - - -9.3 - -6.19 -0.52 0.85
Zm00001d035756 (GRMZM2G088531)
- - 1.5 3.91 3.8 -7.34 - - - -9.07 - -7.85 - 1.14 -4.3 -1.73 - -8.26 - - - - - -10.57 -2.84 - -6.47 -7.54 - - - - -10.28 -11.58 -6.87 -0.22 0.66
Zm00001d037298 (GRMZM2G050748)
- - -3.71 3.55 3.66 -3.12 -3.81 - -3.05 -2.62 -1.92 -1.04 - - -1.07 -4.8 - -1.08 -3.6 -3.03 - - -1.9 - - - - -3.49 1.42 - - - - -5.72 -5.83 -0.33 2.65
Zm00001d037300 (GRMZM2G324375)
-2.28 -4.45 -1.35 2.27 3.73 -2.93 -0.73 -1.39 -0.32 -0.34 -3.33 -0.69 0.85 -1.05 0.03 0.71 -2.53 -0.13 -3.5 -5.48 -2.08 - 2.06 -3.56 -0.19 - -3.63 -1.51 - - - - -1.48 -2.95 -3.61 0.29 0.18
- - - - 2.19 - -1.37 - - 1.01 0.75 0.32 - -0.82 0.37 -2.14 - -0.98 -0.26 - -2.19 - 1.99 - - - - -1.49 3.99 - -1.19 - -4.24 -2.29 -1.06 -0.41 0.39
-2.04 -4.61 1.1 3.24 2.61 -8.26 -3.89 -2.76 -2.38 -3.99 -0.45 -0.67 0.11 0.8 0.67 -1.46 -4.78 -0.9 -6.82 -10.33 -3.96 -5.31 -1.31 -7.42 -3.03 - -2.93 -3.07 2.16 - -5.47 -0.68 -2.78 -1.87 0.58 -0.29 1.63
Zm00001d039347 (GRMZM2G060974)
- - 3.68 1.95 2.82 0.41 -2.91 0.57 - - -0.07 -3.15 0.79 0.48 -6.43 0.43 - -7.06 -5.37 -6.97 -2.08 -4.54 -5.89 -5.32 -2.39 - -3.86 - - - - -0.62 -5.64 - -4.56 0.03 1.24
Zm00001d041168 (GRMZM2G426467)
0.18 -6.88 2.79 4.19 2.89 -8.02 - -7.12 - - - -5.14 - - -2.24 -5.25 - -2.31 -5.21 -7.15 - - -1.69 -8.43 -5.57 - -0.85 -5.13 - -3.13 -5.0 - -9.34 - -0.53 -0.82 -1.14
Zm00001d043179 (GRMZM5G859099)
-6.31 - -0.69 2.59 2.81 - - -4.0 -0.91 -3.58 - -4.33 -2.03 -3.51 -4.44 0.68 -6.0 - -4.44 -3.6 - - - - - - 4.21 -1.55 - - -2.3 - -4.74 - -3.34 -0.36 -1.09
Zm00001d043611 (GRMZM2G167829)
-3.52 - - 4.68 3.08 -4.52 - - -3.67 -5.17 - -6.1 - -3.0 -4.72 -5.19 - -1.77 -0.49 - -5.82 - - - -7.69 - -3.15 -4.18 - - -5.66 - -3.98 -5.0 -4.48 -0.0 -2.94
Zm00001d043868 (GRMZM2G092867)
0.57 -4.34 -0.59 2.97 2.45 -5.31 -3.35 -2.02 -2.27 -3.99 -3.21 -2.62 -1.52 -0.68 0.03 0.2 -2.31 0.59 0.42 -2.71 -3.87 - 0.81 -0.74 -0.82 0.69 -1.7 -2.47 - -4.66 -2.42 -0.67 -5.01 -0.84 2.68 -0.49 -0.81
- - - - 4.98 - - - - - - - - - - 2.45 - - - - - - - - - - - - - - - - - - - - -
Zm00001d048865 (GRMZM2G122498)
-3.09 - -0.65 3.33 3.17 -0.4 -2.29 - -2.28 -2.49 - -0.19 - 0.03 2.85 -0.45 - -3.84 - -2.75 - - -2.18 - -0.45 - -0.67 - - - - - -6.72 - -0.73 1.54 -0.52
- - -6.94 4.84 2.84 - -4.77 - -3.26 - -3.92 -7.21 - - -4.0 -4.99 - - - -6.19 - - - - -8.14 - - -5.6 - - -3.75 - -7.19 - -4.91 -0.76 -2.03
- - -3.64 3.45 4.23 - - - - - -2.18 -5.62 - - -2.86 -2.7 - -4.05 -6.05 - - - - - -4.78 - -1.12 - - - - - - - -6.42 1.71 1.52
Zm00001d049427 (GRMZM2G157364)
- - - 0.6 4.66 - - - - - - -3.92 - - -4.42 -5.62 - -1.94 -2.33 -4.28 - - - - - - 1.58 - - - - - - - -3.57 1.5 1.86
- - - - 4.35 - - - - - - -0.44 - - - 1.16 - 1.72 - 0.59 - - - - - - 3.15 - - - - - - - - - -
Zm00001d052387 (GRMZM2G380784)
-2.64 -3.6 -0.0 2.63 4.2 -2.73 -0.07 - - - -2.06 -2.07 - -3.36 -0.66 1.19 - -4.09 -5.33 -7.03 - - - - -1.91 0.15 -2.71 -2.22 - - - - -4.37 -5.24 0.84 0.56 0.51
Zm00001d052923 (GRMZM2G000652)
- - - 3.93 3.64 -5.88 -2.92 -5.03 - - -0.62 -2.18 - -3.62 -2.48 -1.34 - - -5.38 -0.81 - - - - - - - -2.39 2.05 - - - -4.78 -4.25 -1.63 -0.23 0.53
Zm00001d053862 (GRMZM2G303374)
0.39 -1.54 -1.28 3.53 3.86 -3.51 -4.85 -4.18 -6.55 -5.99 -1.53 -3.95 -6.1 -3.09 -3.43 -2.09 -4.34 -4.62 -3.91 -5.62 -2.31 -3.69 -1.85 -4.7 -3.67 -4.66 -1.0 -3.72 -0.05 - -4.51 0.83 -4.5 -4.63 -3.88 0.9 0.64
Zm00001d054057 (GRMZM2G010280)
- - - 3.29 4.68 - - - -5.65 - - -7.2 - - -3.61 -10.47 - - - - -8.15 - - - - - - - - - - -1.71 - - - 0.28 -
Zm00001d054060 (GRMZM2G010251)
-3.87 - -1.98 3.69 4.48 -7.87 - - - - - -6.1 - - -4.23 -10.39 - - - - -8.58 - - - - - - - - - - -3.45 -7.79 -7.35 - 0.3 -6.25

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.