Heatmap: Cluster_70 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log₂ transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene	Egg cell	Ovule	Uninucleate microspore (Col-0)	Uninucleate microspore (Ler-0)	Pollen (bicellular, Col-0)	Pollen (late bicellular, Col-0)	Pollen (bicellular, Ler-0)	Pollen (tricellular, Col-0)	Pollen (tricellular, Ler-0)	Pollen (mature, Col-0)	Pollen (mature, Ler-0)	Sperm	Pollen tube (Col-0)	Flower (receptacles)	Flower (floral buds)	Flower (sepals)	Flower (petals)	Flower (stamen filaments)	Flower (anthers)	Flower (carpels)	Flower (stigmatic tissue)	Pedicel	Axis of the inflorescence	Silique	Silique (senescent)	Pods of siliques	Pods of siliques (senescent)	Embryo	Endosperm	Seed	Seed (young)	Seed (germinating)	Seedling	Seedling (etiolated)	Meristem	Stem (internode)	Stem (internode, senescent)	Stems	Leaf (rosette)	Epidermis cells	Mature guard cells	Root (differentiation zone)	Root (elongation zone)	Root (meristematic zone)	Root (apex)	Root (stele)	Root (QC cells)	Root (tip)
AT1G18975	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	5.58	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
AT1G23645	-	0.92	2.06	-	1.63	1.43	-	-	-	-	-	-	-	-2.29	5.09	-	-	-	-0.19	-	-	-	-	-2.96	-	-	-	-	-0.89	-	-1.99	-	-	-	-	-	-	-3.95	-	-	-	-	-	-	-	-	-	-
AT1G35215	-0.0	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	1.13	-	-	-	-	-	-	-	-	-	1.14	-	-	-	1.66	4.51	-	-	-	-	4.06	-	-	-	-
AT1G36078	-	-	-	-	-	-	-	-	3.46	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	5.21	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
AT1G36925	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	4.02	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	3.21	1.91	4.23	-	-	-	-	-	-	-	-	-	-	-	-	-	-
AT1G50530	5.1	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	0.67	0.16	1.16	-	-	-	-	-	2.05	-2.61	-	2.13	-	-	-	-	-	-	-2.93	-
AT1G71920 (HISN6B)	-0.34	1.45	-0.68	4.23	1.67	0.61	3.89	-1.8	-2.48	-5.75	-28.37	-4.95	-4.81	-	-	-	-	-	-0.92	-3.77	-	-	-	-5.29	-	-	-	0.28	-0.37	-	-1.14	-	-1.24	-3.16	-4.4	-	-	-0.14	-2.92	-	-3.94	-	-	-	-	-	-2.1	-
AT2G02650	3.1	-	-	-	-	-	-	-	-	-	-	-	2.41	-	-	-	-	-	-	1.94	-	-	-	-	-	-	-	-	4.21	-	-	-	-	3.28	-0.42	-	-	0.46	-	-	-	-	-	-	-	-	-	-
AT2G05140	-	-3.34	3.79	-	3.38	-	-	-	-	-0.4	-	-	0.24	-1.79	-	-	-	-	2.25	-	-	-	-	-	-	-	-	-	0.4	-	-	-	-	-	-1.0	-	-	-2.41	-3.36	-	-	-	-	-	0.47	-	3.71	-
AT2G05360	-1.83	1.0	-	3.24	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-1.25	-	-	-	-	1.91	1.4	-	0.72	-	-	-	-	-	-	-	4.34	-	-	-	2.93	-	-	-	-
AT2G05642	-4.07	-6.3	-1.28	2.83	2.44	3.92	3.55	0.16	1.04	-1.09	0.12	-5.47	-1.65	-4.31	-1.29	-	-	-	-3.85	-5.56	-	-	-	-6.98	-	-	-	-	1.1	-5.92	-6.58	-2.73	-	-5.63	-13.37	-	-	-2.9	-8.23	-	-	-	-4.79	-	-	-	-	-
AT2G06555	-	-	-	-	-	-2.45	-	2.4	4.79	-0.56	3.69	-	-0.97	-	-	-	-	-	-0.66	-	-	-	-	-	-	-	-3.2	-	-	-	-	-	-	-	-7.03	-	-	-	-	-	-	-	-	-	-	-	-	-
AT2G13105	-	-	-	1.95	-	-	3.29	-2.16	4.28	-0.93	3.48	-	1.52	-	-	-	-	-	-3.46	-	-	-	-	-	-	-	-	-	-3.18	-	-	-	-	-	-	-	-	-7.73	-	-	-	-	-	-	-	-	-	-
AT2G14045	1.61	0.99	1.69	-2.22	1.78	2.22	-1.01	-0.47	-1.69	-4.03	-3.91	-4.13	-1.77	0.16	1.41	-0.34	-0.35	-0.9	-1.98	-0.17	-0.15	-0.85	-0.4	-0.16	-1.23	0.21	0.13	-0.97	-2.44	-1.08	-0.73	-0.6	0.11	-0.6	-1.24	0.15	0.06	0.26	-0.25	-1.99	-3.83	0.1	0.65	0.03	-1.01	-0.21	0.73	-0.26
AT2G14765	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
AT2G24340	-	0.53	-	3.53	-	0.73	4.03	-	-	-	-	-	-	-	-	0.2	-	-	-	-	-	-	-	0.03	0.8	-	-	-	3.57	-	-	-0.79	-0.63	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
AT2G27670	-	-2.66	-	-1.36	1.7	0.63	-	-1.84	-1.7	-	-	-	-	-	5.2	-	-	-	-	-	-	0.0	-	-1.08	-	-0.61	-	-	1.41	-	-	-	-	-3.38	-	-	-	-	-	-	-	-	-1.24	-	-	-	-	-
AT2G34120	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
AT2G43960	2.79	-3.86	3.31	2.45	3.21	2.78	2.79	-0.27	-2.31	-2.62	-2.59	-5.38	-4.29	-8.18	-2.93	-	-6.66	-	-0.38	-4.6	-6.2	-	-	-4.33	-	-6.5	-7.71	-7.47	-4.83	-9.36	-3.84	-	-	-	-11.29	-	-7.47	-6.63	-9.55	-	-	-	-	-	-	-	-	-7.68
AT2G47570	-1.12	1.34	2.37	2.69	2.6	-	2.56	-	-	-	-	-	-0.5	0.71	-0.58	1.16	0.15	-	-0.04	1.96	3.03	-0.32	-	-	-	-	-	-	-1.99	-	-4.03	-	-3.71	-	-1.33	-	-	-3.6	-1.49	-	-	-	-	-	-	-	-	-
AT3G10950	-	-	3.97	1.37	2.99	2.03	3.58	-	-	-	-	-	1.69	-	-	-	-	-	0.9	-3.09	-	-	-	-5.13	-	-	-	-	-0.96	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
AT3G20400 (EMB2743)	2.63	1.08	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	1.36	-	-	-	-1.17	-	-	-	-	-	-	-	-	3.24	4.19	1.41	-	-	2.64	-	-	-	-	-	-	-	-	-	-
AT3G26135	-0.41	1.2	1.75	-	2.46	1.04	-	1.38	-	-1.56	-	-	0.91	0.12	3.62	-	-	-	-	-	-	-	-	-2.72	-	-	-	-	-0.59	-	-	-	0.42	1.22	-	-	-	0.12	-3.03	-	-	0.09	-0.82	-	-	-	-0.64	2.97
AT3G28310	0.62	-3.36	2.58	-2.36	3.48	3.2	-	0.53	-	-2.11	-	-3.1	-3.05	-2.53	1.04	-	-	-	-1.63	-2.5	-	-1.79	-	-3.56	-	-2.81	-2.48	-	-2.75	-	-3.73	-2.44	0.02	2.96	-3.61	-	-	-2.36	1.61	-	-	-1.35	-0.27	-	-0.68	-	-	-3.45
AT3G28320	1.15	-3.28	3.9	-1.36	0.98	-	-	-	-1.82	-2.04	-	-	-	-1.93	-	-	-	-	-0.69	-2.28	-	-	-	-6.96	-	-	-	-	3.52	-	-	-3.1	-1.93	0.98	-5.34	-	-1.34	2.82	1.9	-1.41	-	-	-1.39	-	-0.36	-	-	-2.55
AT3G28925	-0.29	2.01	0.58	-	2.59	2.46	-1.64	-0.21	-1.64	0.26	-	0.57	0.03	0.38	1.8	-1.24	-0.41	-1.59	-	0.34	-	-1.7	-1.2	0.27	-	-1.35	-0.15	-	-0.59	-	0.31	-1.31	-0.99	-0.22	0.86	0.31	-1.16	-1.02	-2.44	-1.08	-	0.73	-1.21	-	-1.19	-	1.21	-0.04
AT3G42310	3.01	0.1	-	-	-	-	-	-	-	-	-	-	-	2.93	-	-	-	-	1.86	-	-	-	-	-1.71	-	-	-	-	3.46	-	-	-	1.94	3.28	-	-	-	0.75	-	-	-	-	-	-	-	-	0.13	-
AT3G42786	-	-	-	-	-	-	5.58	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
AT4G00600	3.23	-1.92	-0.66	2.84	-1.65	0.36	1.46	-0.57	-	1.17	0.74	-1.82	-0.04	-2.64	-	-1.14	-	-	0.41	-2.56	-	-	-	-3.29	-	-	-	1.27	3.19	-	-3.6	-	-	-	-1.71	-0.16	-0.07	-3.33	-2.96	1.99	-	-	-	-	-	-	-2.36	-
AT4G01245	-0.64	-	-	-	4.28	-	2.96	-	-	-	-	1.68	-	-	-	-	-	-	0.83	-	-	-	3.03	-	-	-	-	-	-	0.36	2.03	-	-	-	-0.86	-	-	-0.06	-2.35	-	-	-	-	-	-	-	-	-
AT4G01780	-0.31	-2.23	3.7	2.85	3.0	-4.83	2.68	-4.86	-	-	-2.85	-	-1.25	-2.74	-3.33	-0.8	-	-4.56	-0.58	-4.83	-	-4.78	-	-1.78	-	-2.54	-2.75	-3.13	0.62	-	-3.66	-2.84	-3.69	-3.36	-3.77	-	-4.22	-3.9	-1.21	-0.87	-	-0.24	0.86	0.61	-0.96	-	-3.46	0.61
AT4G03440	-2.83	0.54	-0.31	0.35	0.07	0.26	0.47	-3.44	-2.4	-4.88	-2.94	-1.33	-2.02	1.84	0.85	-0.32	-0.04	-0.99	-1.77	0.02	2.71	-0.3	-0.29	-0.68	-1.22	-0.3	-0.64	-0.03	-1.16	-0.33	-1.22	-0.42	-0.37	-0.06	-1.3	-0.36	0.1	0.44	0.66	-0.75	-5.07	2.06	1.2	-0.85	0.38	-	-	-0.56
AT4G07965	-	1.31	-	-	4.05	-	3.78	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	3.25	2.08	-	-	-	-	-	0.5	-	-	-	-	-	-	-	-	-
AT4G08874	-0.18	1.84	1.77	-	0.21	-	-	-1.41	-	-3.62	-	-	-	1.21	1.62	1.61	-0.11	-	-1.07	1.26	0.16	2.06	0.29	0.19	-0.33	0.84	-1.16	0.89	-	0.15	-0.09	0.15	0.53	0.37	0.48	-1.04	-2.2	1.31	-0.97	-	-	-	-1.97	-1.36	0.38	-	-	-0.32
AT4G11373	-	-	-	-	-	3.79	-	-	-	-	3.18	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	3.79	-	-	-	-	-	-	-	-	-	-0.17	-	-	-	-	-	3.31	-	-0.97	-
AT4G15096	-2.19	-1.46	0.51	3.92	2.42	-1.05	4.24	-	0.75	-2.59	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-3.22	-5.05	-	-	1.19	-2.7	-	-	-1.81	-2.03	-	-	-2.84	-0.71	-3.18	-	-	-	-1.87	-	-	-	-	-
AT4G16940	1.15	0.08	1.32	-6.1	1.44	1.75	-4.86	0.76	-	-0.07	-	-5.06	1.19	-0.36	1.75	0.15	-0.36	-1.14	-0.47	-0.67	-0.54	-0.49	-1.41	0.1	0.33	0.59	1.7	-1.88	-0.82	0.02	-0.21	0.65	-0.08	-0.68	-1.65	-0.75	1.27	-0.12	0.71	-0.01	-0.89	-2.41	-1.61	-1.72	-2.29	-	-	-2.63
AT4G16957	-0.03	-0.34	-1.23	-3.02	-0.7	-1.08	-5.44	-0.43	-	-0.97	-	-5.83	-0.87	-0.18	-0.1	-0.66	-2.69	-1.36	-0.9	-0.94	-1.9	-1.1	-0.32	-1.66	-2.57	-1.25	0.21	0.55	-0.6	-2.75	-1.1	-0.21	-0.54	-0.06	-0.43	0.43	2.91	0.55	2.51	-2.51	-1.25	1.12	1.68	1.47	0.1	-2.73	0.22	1.0
AT4G16960	-3.37	-0.15	-1.32	-3.7	-0.91	-1.36	-3.11	-0.93	-4.68	-2.35	-5.5	-7.44	-0.68	0.15	-2.35	-0.24	-3.22	-2.44	-1.46	-1.08	-2.34	0.15	0.78	-1.09	-2.0	-0.5	0.4	0.95	-1.41	-2.21	-1.09	0.0	-0.68	0.12	-0.32	0.67	2.7	0.79	2.88	-1.95	-0.83	0.86	0.9	1.3	0.78	-	0.55	0.23
AT4G17585	0.72	1.07	-	-	2.39	3.25	-	-0.41	-	-0.35	1.92	-	4.37	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	0.4	-	-	-	1.1	-	-	-	-	-	-
AT4G24644	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
AT4G29200	-	-3.35	0.77	3.17	0.22	1.21	2.57	-	-	-	-	-	-	-2.73	0.2	-	-	-	-	-5.16	-	-2.31	-1.8	0.18	0.77	-0.77	-	-1.76	2.03	2.44	-4.28	2.23	0.13	0.45	-4.95	-	-2.04	-1.89	2.19	-	-	-	-1.81	-	-	-	-	-2.97
AT5G01440	-	-	4.37	3.52	-	-	-	-	-	-	-	-	-	-	-	-	-	-	2.44	-	-	-	-	-	-	-	-	-	2.08	-	1.05	-	-	-	2.05	-	-	-	-	-	-	-	-	-	-	-	-	-
AT5G27070 (AGL53)	-	-0.22	2.16	2.99	0.66	-	2.52	-0.78	-1.93	2.64	-	-3.7	1.03	-3.86	-	-1.49	-	-2.14	3.03	-2.52	-	-	-	-1.8	-	-2.06	-	-	1.55	-	-4.34	-	-3.66	-3.79	-0.14	-1.03	-1.29	-0.98	-4.01	-	1.18	-	-	-	-0.3	-	-3.93	-
AT5G27260	-	-0.0	-	-	-	0.19	0.51	-	-	-	-	-	-	-	-	-	-	-	-	-0.22	-	0.04	-	-	-	-	-	-	-	-	-	0.7	-0.35	0.56	0.06	-	0.58	-2.52	-	-	-	1.47	0.56	-	4.96	-	-	-0.53
AT5G33393	-	-	-	-	-	-	5.4	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	2.25	-	-	-	-	-	-	-	-	-	-0.05	-	-	-	-	-	-	-	-	-
AT5G35375	0.69	0.22	-	-	-	-	-	-	-	-	-	-	-	-0.5	-	-	-	-0.23	-	-1.54	-	-	-	0.62	3.83	-1.02	-	-	-	3.92	-0.29	2.09	-	-0.93	-	-	2.14	-3.8	-0.7	-	-	-	0.18	-	-	-	-	-
AT5G39640	-	-0.24	-	3.06	-	-	3.72	-	2.2	-	-0.76	-	-2.33	-2.73	-	-	-	-	-	-3.28	-	-	-	-3.4	-	-	-	-	4.3	-	-3.85	-	-	-3.24	-	-	-	-	-	-	-	-	-	-	-	-	-	-
AT5G39645	-	5.44	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	1.39	-	-	-	0.98	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
AT5G46670	-	-1.59	-	3.29	-	-	-	-	-	-	-	-	-	-0.35	-	2.03	-	-	0.95	-	-	-	-	-2.83	-	-	1.81	-	1.41	-	-	1.85	0.33	-0.08	-	-	1.79	-2.35	0.98	-	-	-	1.77	-	2.79	-	-	1.59
AT5G56330 (ACA8)	0.32	1.83	-	-	-	-0.27	1.63	-	-	-	-	-	-	0.85	2.08	-	-	-	1.06	0.21	0.65	-	-	-4.51	-	-	-	-	3.5	-	3.86	-	-	-	0.8	-	-	-0.72	-2.6	-	-	-	-	-	-	-	-	-
AT5G67040	1.3	-3.3	-	3.92	0.37	-	4.78	-	-	-	-0.1	-	-	-1.57	-	-	-	-	-	-	-	-	-	-1.9	-	-	-	-	-	-	-	-	-	-	-	-	-	-3.99	-	-	-	-	-	-	-	-	-	-

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.