Heatmap: Cluster_192 (HCCA cluster)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Root (elongation zone)
Root (meristematic zone)
Root (stele)
Root (tip)
Root
Leaf (3rd leaf of seedling)
Leaf (3rd leaf)
Leaf (apex)
Leaf (bundle sheath)
Leaf (mesophyll)
Leaf (Seedling)
Leaf
Internode
Stalks
Shoot
Shoot (apex)
Tassels (primordia)
Tassels
Anther
Pollen
Ear (immature)
Ear (inflorescence)
Ear (leaf)
Ear (primordia)
Ear
Silks
Kernels (germinating)
Kernels
Maternal transfer zone
Nucellus
Embryo
Endosperm (transfer layer)
Endosperm
Seeds
Coleoptyle (5 day)
Seedling
Whole Plant
Zm00001d002949 (GRMZM2G438841)
- - - - 0.95 - - - - - 4.41 2.48 - -0.14 - 1.02 - - -2.36 -3.28 - - - -2.43 -3.44 2.07 - - - - - - -2.03 - -2.72 -3.91 -
Zm00001d003552 (GRMZM2G028640)
-5.78 -3.34 -2.72 -2.9 -1.73 2.47 2.89 -0.54 -6.43 -5.77 1.83 1.71 -3.88 0.81 -0.71 -0.79 -3.04 -2.88 -1.82 -6.29 0.11 -2.04 1.11 -4.5 0.54 -3.96 -0.82 -2.1 -4.85 -0.18 -0.96 -0.78 -1.04 -2.81 -3.27 -1.6 1.74
- - 0.29 - 0.73 - - - - - 2.03 -0.85 - -0.49 -2.0 1.44 - - - 0.13 -3.2 - - - 2.06 - 1.14 3.49 - - - - -1.41 - - -1.7 2.66
Zm00001d005017 (GRMZM2G079100)
- - - 0.23 -0.98 1.34 2.08 - - - 0.71 0.24 - -1.53 -1.82 0.45 1.79 -2.33 -1.34 -2.56 -3.01 -2.83 1.94 - 1.12 0.82 - -0.48 - 1.6 -0.48 - -0.23 -6.46 1.91 1.04 -1.56
- - - 1.02 0.58 2.77 -4.18 - - - 1.13 1.23 - -3.55 -6.59 0.75 0.84 - -1.69 -2.17 -7.11 - 1.41 -6.5 - 0.11 - 0.67 - - 0.17 - -2.04 - 2.43 0.9 2.0
Zm00001d006122 (GRMZM2G174430)
- - - - - - - - - - - 4.79 - - - 3.22 - - - - - - - - - - - - - - - - - - - - -
Zm00001d006307 (GRMZM2G315902)
-4.93 -5.03 -1.43 -0.21 -0.73 -2.84 -1.07 - -2.16 -4.45 2.19 0.48 - 0.61 -1.38 0.64 1.56 -1.51 1.05 -2.38 -1.11 0.12 -1.27 -0.3 -1.18 2.92 -3.89 -0.99 - 2.46 -0.87 - -3.29 -5.17 -0.59 -1.27 -0.71
- - -2.6 - -0.05 - 2.14 - - - - 1.22 - - - 0.58 - - 0.22 - -4.64 - - - 2.98 - - -1.81 - 3.74 -2.2 - -2.14 -3.55 -1.19 -0.57 1.69
-3.42 -1.43 -0.11 -2.7 0.09 0.22 -2.81 1.08 1.07 1.39 -1.39 1.31 -1.63 -3.07 0.86 0.9 0.68 -0.57 -0.39 -6.91 -1.25 -1.24 0.81 -0.51 1.03 -0.56 -0.91 -1.04 - 1.41 -0.51 - -3.12 -6.06 1.49 0.45 0.59
Zm00001d007775 (GRMZM2G144821)
-2.62 -3.39 -0.56 - -2.13 2.84 -5.37 -2.14 -0.97 -1.96 1.06 1.08 -3.62 -4.87 -2.26 0.4 -1.37 1.08 0.99 -1.88 0.72 -2.41 - -2.26 2.23 -2.46 -2.6 0.38 0.97 0.71 -2.68 0.21 -0.77 -0.34 -4.58 0.25 0.17
- - - 0.75 0.49 -4.0 -0.97 -3.82 - - -1.77 1.8 - - 1.21 1.72 - - -0.07 -4.0 -4.04 - - - - - - 2.26 1.25 - -1.89 -1.28 1.66 1.94 2.04 1.02 0.84
- - -1.41 - -1.88 - - - 0.21 0.4 1.27 2.84 - - 3.0 -1.26 - - - - -1.85 - 1.25 -1.64 -0.62 - - -1.34 - - - - - 0.97 -4.16 2.93 1.17
- - - - 2.46 - - - - - - 3.2 - - - 1.44 - - - - - - - - - - - - - - 4.29 - - - - - -
Zm00001d011446 (GRMZM2G179685)
- -6.57 -2.63 -1.3 0.18 1.32 1.11 0.23 -3.21 -3.76 0.02 0.76 - 1.43 -2.19 0.23 -0.86 -0.65 0.6 - -4.41 2.1 1.7 -3.29 0.55 -2.07 0.23 -0.24 - 1.27 -3.97 - -2.31 -0.87 0.8 0.34 1.08
-3.86 - -3.32 3.71 -4.5 0.34 -4.46 - - - - -1.8 - -4.05 -4.93 -1.74 - -3.54 -3.11 -1.79 - - - - 1.68 4.02 - -1.77 - - - - -2.35 -6.56 -3.39 0.26 -
-0.1 - - - -1.95 - 4.14 - - - - 1.36 - - - -0.47 - - 2.27 -3.3 - 0.9 - - - - - - - - - - - - -2.47 1.26 2.47
Zm00001d016066 (GRMZM2G120408)
-2.61 -2.23 0.58 -0.32 -0.33 1.91 0.44 0.43 -0.87 -0.64 -1.48 -0.4 -1.66 -2.41 -0.99 0.41 1.74 1.24 -0.29 1.2 0.4 -0.27 -1.58 1.17 -0.23 -4.12 0.06 -0.37 -4.58 -1.68 -2.33 0.14 -0.42 -1.23 -1.02 -0.41 1.07
- - -4.75 0.04 -2.25 0.43 -3.75 1.03 1.1 1.82 0.07 1.68 - - 1.91 -0.27 -1.03 -0.15 -0.08 - -0.0 0.18 1.05 -2.61 0.05 0.68 -4.13 -1.73 - 1.74 -2.56 - -3.93 -5.5 0.77 1.19 -1.07
- - - - -2.35 2.52 3.5 0.06 - -5.01 2.06 1.45 - -0.98 -3.82 -1.51 -2.61 -4.42 -1.06 - -1.65 - - -3.03 1.75 -0.59 - -6.93 0.62 - -4.81 - -5.98 - -0.3 0.73 0.7
Zm00001d018210 (GRMZM2G084116)
-0.94 0.13 0.31 - -0.19 2.84 - 0.5 - - 1.83 1.42 -1.78 -1.0 0.33 -0.45 -1.17 -3.68 -2.29 - -2.16 - 1.61 - 1.45 -2.67 1.96 -0.8 - - 0.51 - -1.25 - -1.74 -1.64 0.9
- - - - 0.07 3.04 - 0.16 - - - -0.76 - - - 0.29 3.12 - - -2.68 - - -0.56 - - 3.46 - - - - - - -0.71 - -0.75 1.64 -
- - - - 0.0 - - - - - - -0.52 - - - 1.11 - - 3.16 - 2.19 - - - 3.44 - - - - - - - - - 3.13 - -
- - - - - - - - - - - 5.21 - - - - - - - - - - - - - - - - - - - - - - - - -
- - - - 0.4 4.0 - - - - -1.7 0.63 - 1.55 0.78 -0.26 - - -1.51 -0.89 -1.29 - - - 0.43 - - -2.48 - - - - -5.53 - - 1.66 2.66
-1.86 -3.06 -1.12 - -0.63 - - -2.81 -4.2 -3.53 -0.59 -3.82 -1.13 - -4.0 0.11 -2.13 - 1.21 - - - - -0.78 -4.4 - -4.51 -3.53 - - 0.13 - -0.57 0.43 - -3.61 4.72
Zm00001d019486 (GRMZM2G443091)
-3.31 -0.23 - -0.19 -1.47 2.14 2.76 -5.16 - - -1.6 -0.47 - - -4.23 -0.42 2.34 -1.37 -1.57 -4.52 -2.17 1.55 - -0.65 0.8 1.59 - -2.78 0.76 - -2.33 - -4.18 - 1.62 0.87 -1.49
- - -3.98 - -5.88 3.08 3.72 - - - -2.03 1.87 - -4.35 -1.78 -1.16 -5.73 - -2.55 -5.46 - - - - 1.95 - -4.31 - - - - - - -4.02 -4.64 -2.76 2.65
- - - - - - - - - - - 5.21 - - - - - - - - - - - - - - - - - - - - - - - - -
- - - - -0.71 0.18 - - - - 2.59 1.58 - -0.65 - -1.03 -1.5 - -2.24 - -0.69 0.43 - - 2.21 2.21 - -3.05 3.18 - -3.84 - -4.24 - - -3.19 1.96
- - - - -3.23 -0.15 -0.59 -0.73 - - 0.3 1.17 - - - -3.5 - - -3.21 4.27 -1.78 - - - 2.88 - - - - - 0.05 - -5.04 - 0.97 -0.38 -1.53
- - -2.64 - 0.86 1.77 1.97 -1.38 - - 0.58 1.2 - 1.18 -3.31 0.9 0.23 -4.61 1.48 -4.72 0.46 1.08 - -3.42 0.62 1.15 - 0.45 - 1.21 0.23 - -3.12 -0.88 -1.05 0.31 -0.59
Zm00001d027532 (GRMZM2G110345)
-2.12 -1.16 -3.75 -1.44 -0.87 -0.3 -0.97 1.16 -1.46 -2.56 -4.02 -0.07 -0.52 0.29 0.77 -0.69 0.62 0.49 0.29 -0.82 0.47 -0.16 0.19 2.94 -0.24 -2.07 -1.01 -0.48 - -0.52 -0.61 -4.47 -0.95 -1.09 0.27 0.37 1.57
Zm00001d028502 (GRMZM2G372502)
- - 1.99 - 1.16 0.44 -1.82 -1.62 0.97 - 0.42 -0.1 - 1.71 -0.84 0.1 -1.59 - -1.2 - -2.96 - - -2.86 1.14 2.54 - -0.16 - - - - -0.66 - 2.28 0.68 1.41
Zm00001d029564 (GRMZM2G425430)
-5.78 -7.04 -2.21 1.6 -0.86 1.59 0.81 0.73 -1.88 -2.19 1.48 0.71 -3.14 -0.58 -0.63 -0.31 -0.06 -2.17 0.21 -3.01 -0.94 -0.88 2.19 -0.25 0.28 0.15 0.03 -1.61 -1.73 1.07 -1.3 -4.72 -3.28 -4.78 0.25 -0.31 1.02
Zm00001d030814 (GRMZM2G137786)
- - - - - 1.79 -1.84 - - -3.12 - 0.16 - - -1.62 -0.16 3.82 2.62 -0.4 - -4.89 - - - - -0.12 - -0.46 - 1.94 - - 0.43 0.64 -2.34 0.24 -
- - - - - - - - - - - 4.01 - - - -2.97 - - 2.31 3.25 2.67 - - - - - - - - - - - - - - - -
-2.34 -0.89 0.76 -0.31 -0.6 0.49 0.17 0.73 0.11 0.17 -1.05 -0.28 -0.57 0.61 0.12 0.37 0.74 -0.78 -0.31 -7.72 0.8 -0.8 1.04 1.39 -0.03 -1.96 0.46 0.13 - -3.22 -0.98 -1.66 -0.61 -1.52 0.42 0.12 1.44
- - - -0.62 0.2 2.26 2.76 -0.38 - - 0.83 1.62 - 0.79 -1.5 1.06 -0.5 - -0.54 -1.04 -0.04 - - - 1.0 0.68 -4.3 -0.53 - - -2.54 - -2.15 -3.18 -1.04 1.46 1.51
Zm00001d032925 (GRMZM2G433446)
- - -4.55 -4.95 -0.99 2.41 -1.83 -1.36 -1.81 -2.08 2.04 1.85 -7.03 0.55 -4.38 -0.36 0.51 -5.42 -1.46 -9.49 1.24 0.17 1.02 -4.61 1.86 1.75 -4.57 -0.95 -3.43 -3.98 -1.02 - -4.18 -3.44 -5.27 0.51 1.45
Zm00001d032993 (GRMZM2G093708)
-6.66 - -1.99 - -0.38 2.53 2.83 -2.67 -0.87 0.92 0.38 1.61 - - 0.95 1.56 -3.14 -0.51 -3.82 - 0.58 0.51 -0.3 -6.28 -0.09 - - -4.17 - - - - -5.62 - -3.66 1.27 1.63
-8.09 - -4.7 - 0.78 -4.16 -4.62 -1.34 -4.36 -3.95 2.57 2.68 - 1.49 -2.36 1.21 -6.94 - -0.87 -2.42 -1.78 - -4.64 - 3.02 1.51 -2.61 -3.42 - - - - -4.83 -8.45 -5.51 -0.8 2.01
Zm00001d034118 (GRMZM2G105185)
-3.12 -0.29 -1.39 - 0.69 -2.33 -2.07 0.18 -1.65 -1.59 -1.29 -0.7 -0.38 -2.65 -1.06 0.64 1.92 -0.3 -0.48 -3.78 -1.95 0.63 -2.84 0.47 0.86 -4.58 -0.26 1.83 -0.11 -0.68 0.24 -1.26 1.88 1.1 1.35 -0.85 -0.26
Zm00001d035587 (GRMZM2G179270)
1.56 - - - 1.26 - - - - - - 1.61 - - - 0.06 -0.22 - -0.73 - - - - - 3.14 3.77 - - - - - - - - - -0.27 1.47
Zm00001d035647 (GRMZM2G334239)
- 0.2 -1.91 - 0.58 -3.0 2.8 -3.0 -0.93 - -1.29 1.83 - - -3.48 1.34 -1.32 -1.05 2.75 - 1.06 - - -1.79 2.6 0.29 - -1.04 - - - - -1.41 -4.22 -3.14 0.41 -3.33
-2.38 - - - -2.97 - -3.57 2.61 - - - 3.17 - - -2.85 -0.93 -1.64 - - - -1.74 - - - 3.74 - - 0.87 - - - - 0.27 -1.86 -6.25 -0.32 1.44
- - - - - - - - - - - 5.21 - - - - - - - - - - - - - - - - - - - - - - - - -
- - -1.3 - -3.31 2.06 3.93 - - -0.98 - 0.6 1.06 - -4.73 -0.44 1.13 1.73 -1.51 - - - - - - - - - - - - - -0.04 -0.53 - -0.59 2.02
Zm00001d037082 (GRMZM2G314145)
- -1.05 - - -0.31 2.7 - 1.85 1.16 1.34 0.39 2.45 - - 3.28 -4.52 - - -2.84 -1.69 - - 0.39 - - - - -2.73 - - - - - -0.81 - 0.9 -
- - - - -2.71 0.88 - -1.22 -3.72 -0.29 - 0.41 - - 0.83 -6.38 - - - - - - 0.12 - - - - - 3.78 - - 3.65 - -1.18 - -0.87 1.16
- - - - -3.9 - 0.9 - - - 0.23 0.71 - 4.71 - 0.1 - - - - - - - - 1.35 - -0.04 -2.64 - - - - -5.0 -2.53 -4.71 0.15 -
- - -3.5 0.15 -1.13 -3.1 -1.99 - - - 2.46 2.71 - 0.94 -1.3 -0.98 - - -5.16 - -1.14 - - - 3.12 0.96 - -4.98 - - -2.68 - -2.67 - -4.43 1.4 2.59
- - - -0.81 -0.74 2.73 0.23 - -5.35 - 2.41 0.89 - - -8.17 0.67 0.54 - 0.11 -7.94 -1.09 - 0.94 -8.18 0.58 -1.5 - -1.24 - -1.87 -6.08 - 1.05 - -1.31 0.63 2.94
Zm00001d041528 (GRMZM5G842766)
- - - - - - - - - - - 5.21 - - - - - - - - - - - - - - - - - - - - - - - - -
- - - - -0.73 - -0.88 - - - -1.62 2.1 - -2.08 0.4 -0.8 - -2.42 -3.84 -0.23 - - - - 3.18 - - 0.17 3.73 - -3.4 - -2.08 - -5.08 1.72 -0.09
Zm00001d041861 (GRMZM2G402368)
- - -0.47 0.24 0.39 1.04 1.53 -0.22 - - 1.58 1.1 - 2.3 -2.52 0.4 -0.81 - -0.57 -3.47 0.31 -3.44 -1.14 -8.73 1.31 0.66 -1.35 -0.22 - -1.73 -1.97 - -1.41 -6.49 -0.14 0.47 2.26
- - - - 0.75 -0.91 - - - - 1.14 1.22 - - -0.62 2.05 1.98 - -0.71 1.6 -2.2 - - - - 2.55 - 0.65 - - - - -0.34 - 3.1 -3.19 -0.45
2.09 - 0.26 - 1.56 -1.72 1.4 - - - - 1.12 - 2.08 - -4.83 0.3 -0.6 0.59 - - - - - 0.0 - 2.25 1.62 - - - - - - - -0.51 2.65
Zm00001d045250 (GRMZM2G419244)
- - - - - - - - - - - 3.54 - - - 0.9 - - - 1.62 - - - - 4.18 - - - - - - - - - 0.09 0.36 -
- - -0.8 - 0.18 -1.72 - -3.84 - - -1.23 0.14 - -2.18 - 1.16 3.07 -2.37 0.72 - -0.8 0.51 - - 1.51 -1.94 0.55 3.12 1.08 - -3.46 - 0.21 -6.37 -0.8 -0.24 -0.68
- - - - 2.78 - - 2.55 - - - -7.09 - - - 2.18 - - -0.14 - - - 4.05 - -2.9 - - -1.49 - - - - - - 0.29 - -0.83
-4.32 - -3.25 1.62 -0.19 1.12 1.98 - - - 2.27 0.98 - 2.55 -1.67 0.84 1.14 - -0.22 -6.23 -6.31 0.5 - -3.07 1.11 0.22 -5.19 -0.34 - - - - -2.49 -5.71 -7.69 0.13 0.97
- - -7.88 -4.9 -7.02 -0.74 -1.33 - -3.45 -2.77 3.96 2.5 - -6.14 -4.75 -5.64 - -7.45 -3.26 -8.15 - - -2.52 - -3.79 3.28 -7.02 -10.83 -1.41 -5.03 - - -7.02 - 1.44 -2.04 -0.08
- -3.87 - - -2.2 -1.91 2.11 - - - -2.43 0.19 - 3.68 - 0.29 - - -2.32 -6.09 -3.5 - - - 1.84 - - -1.54 - 2.68 0.63 - -5.31 -1.58 -5.37 -0.61 1.83
- - - 3.73 -0.9 - - - - - - 1.33 - - - 0.43 - - 2.54 - 1.29 1.6 - -0.69 - 1.22 1.08 - - - - - -2.91 - - 1.13 -0.63
- - - - - - 3.76 - - - - 0.85 - - - 2.28 - - - - 3.67 - - - - - - - - - - - - - 1.33 0.68 -
Zm00001d046294 (GRMZM2G085538)
- - - - 1.22 - - - - - 1.96 -1.94 - - -1.88 0.84 - - -0.22 - - - - - 2.27 2.75 - 2.46 - - - - -0.99 - - -2.46 3.3
Zm00001d046447 (GRMZM2G444039)
- - - - - - - - - - - 3.47 - - - 1.69 - - - - - - - - - - - - - - - - - - 4.51 - -
- -6.52 - 3.31 -0.14 1.17 2.86 -8.87 -4.86 -7.11 2.15 1.48 -6.39 -7.46 0.35 -1.17 -5.52 -5.61 -0.25 -3.5 -2.27 - -0.97 -10.11 0.58 -6.82 - -7.94 - - -6.8 - -4.92 -9.04 -3.53 -1.0 1.94
Zm00001d047010 (GRMZM2G067450)
- - - - 0.76 - - - - - 1.78 -0.81 - - -4.96 1.3 - - 0.15 -0.87 -3.1 - - -4.1 2.52 - - 3.19 - - - - -1.24 -2.16 -2.34 -1.13 3.43
Zm00001d047032 (GRMZM2G473104)
- - - - -2.08 3.19 1.99 -1.43 - - 1.1 0.65 - 0.24 0.53 -1.01 -1.3 -6.08 -0.95 1.25 0.49 -1.15 0.64 - -0.42 - - -6.49 - 0.98 -2.29 - -5.71 - -6.85 0.26 2.47
Zm00001d047033 (GRMZM2G144245)
- - - - -1.68 -6.33 3.49 -0.84 - - 1.96 1.11 - -3.21 1.11 0.09 - - -1.2 -7.38 -2.89 - - - 1.11 - - - - 3.23 -0.42 -1.25 -3.74 - - 0.16 0.02
Zm00001d048981 (GRMZM2G470653)
- - - - -0.55 - -0.1 - -0.85 - 0.84 2.91 - - 1.55 0.68 - - - -3.46 -2.87 - - - 3.77 1.88 - - - - - - -0.56 - 0.27 0.67 -
Zm00001d049529 (GRMZM2G048297)
- - - 1.77 0.12 0.23 2.09 -4.0 - - 0.64 1.62 - -2.51 -7.71 1.39 2.17 -6.08 0.52 -3.79 1.34 - - - 0.41 -3.17 - -1.95 - -3.06 -5.25 - -0.49 - -9.45 0.98 2.7
-5.75 - -1.31 -2.23 -1.05 0.4 -3.97 0.41 1.63 1.66 0.56 0.69 -3.34 -0.09 0.09 -0.2 - -0.36 -0.85 -7.14 -1.49 0.63 2.52 -6.92 0.49 -2.44 -1.01 -0.02 - 1.87 -0.07 - -0.41 -7.1 0.15 0.38 -0.02
- - - - 2.64 - -0.15 - - - 0.88 1.27 - - -4.61 2.71 -1.71 0.31 1.67 - 1.85 - - - -3.68 - -1.03 1.18 - - 1.55 - -3.98 -0.84 -5.12 0.0 1.72
- - - - - - - - - - - 4.32 - - - 4.09 - - - - - - - - - - - - - - - - - - - - -
- - -5.36 - 0.16 -4.2 - - - - 3.07 1.76 - 2.08 - 0.38 -5.51 - - -7.87 1.56 - - - 2.26 1.26 - 0.61 - - - - -3.68 -4.59 - 0.51 2.4
-4.91 - -5.85 2.64 -1.4 1.82 -0.04 -3.36 -1.43 -1.38 -2.83 1.19 -3.49 0.93 1.15 0.09 -1.76 -0.64 1.94 - -0.56 - 0.45 -1.7 -2.64 - -2.47 -1.79 - - -1.8 - -8.05 -2.46 -6.12 -0.33 3.05
Zm00001d051842 (GRMZM2G019177)
-5.0 -2.12 -1.47 -0.46 -0.43 1.75 1.34 0.19 -0.46 -0.29 1.75 1.13 -3.23 0.08 -0.16 -0.66 -1.19 -2.61 -1.59 -10.59 -1.19 -0.79 1.31 -2.14 0.89 -2.43 1.07 -1.37 - 0.45 -0.28 -2.82 -4.05 -1.69 1.73 0.45 0.59

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.