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Heatmap: Cluster_2 (HCCA)

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(Showing raw values)

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Gene
Egg cell
Ovule
Uninucleate microspore (Col-0)
Uninucleate microspore (Ler-0)
Pollen (bicellular, Col-0)
Pollen (late bicellular, Col-0)
Pollen (bicellular, Ler-0)
Pollen (tricellular, Col-0)
Pollen (tricellular, Ler-0)
Pollen (mature, Col-0)
Pollen (mature, Ler-0)
Sperm
Pollen tube (Col-0)
Flower (receptacles)
Flower (floral buds)
Flower (sepals)
Flower (petals)
Flower (stamen filaments)
Flower (anthers)
Flower (carpels)
Flower (stigmatic tissue)
Pedicel
Axis of the inflorescence
Silique
Silique (senescent)
Pods of siliques
Pods of siliques (senescent)
Embryo
Endosperm
Seed
Seed (young)
Seed (germinating)
Seedling
Seedling (etiolated)
Meristem
Stem (internode)
Stem (internode, senescent)
Stems
Leaf (rosette)
Epidermis cells
Mature guard cells
Root (differentiation zone)
Root (elongation zone)
Root (meristematic zone)
Root (apex)
Root (stele)
Root (QC cells)
Root (tip)
AT1G02520 (PGP11)
 3.14 5.93 0.52 0.86 0.54 0.18 0.66 0.0 0.02 0.02 0.0 0.05 0.13 1.15 1.06 0.08 0.13 0.19 13.63 2.52 6.47 0.05 0.24 0.67 0.18 0.13 0.49 0.17 5.08 0.12 7.61 4.39 0.77 3.65 0.86 1.33 0.89 0.78 0.49 0.7 5.81 26.2 8.75 16.9 20.6 4.65 160.06 12.3
7.95 10.34 2.53 1.11 2.58 1.2 0.98 1.46 3.39 10.93 6.08 0.57 6.31 12.24 5.76 17.03 13.53 16.22 5.13 17.63 5.69 8.56 25.0 2.81 28.59 2.41 2.38 51.47 0.88 11.16 7.93 72.34 31.45 54.58 58.49 3.99 2.58 22.91 6.41 14.51 12.71 17.74 106.49 230.45 90.72 486.3 592.45 161.93
11.33 19.28 26.25 23.97 17.51 7.67 21.99 2.7 7.12 1.82 4.54 132.73 11.8 11.35 13.89 15.93 21.97 12.91 13.28 27.68 26.87 12.76 19.01 20.28 17.81 17.37 24.97 18.66 21.65 14.81 30.0 20.44 6.73 8.54 22.83 18.85 26.34 13.1 13.32 2.02 0.83 11.66 10.36 14.4 13.98 22.62 38.47 9.22
10.38 16.78 23.91 20.43 18.3 14.07 20.33 5.71 6.04 3.7 5.22 69.18 11.59 12.22 11.09 8.56 19.38 13.28 6.22 12.72 7.68 7.3 10.42 8.33 17.09 7.87 13.51 16.87 12.09 24.74 8.33 8.57 8.48 12.82 7.7 10.34 15.5 13.63 29.12 7.85 16.32 19.87 21.02 18.7 9.01 16.34 28.11 11.47
AT1G08770 (PRA1.E)
 20.01 20.95 11.23 9.39 10.65 13.28 12.58 36.11 49.32 54.76 57.17 409.49 36.79 13.81 16.57 12.73 16.76 29.07 44.44 15.65 35.99 12.23 11.07 19.17 9.15 18.27 32.18 11.24 7.19 5.48 22.23 11.87 16.94 33.76 15.11 29.99 34.74 28.48 22.72 0.4 11.31 35.34 27.87 14.65 22.14 20.32 136.05 11.75
40.67 23.68 15.89 13.88 14.83 11.47 15.28 17.65 31.88 14.04 32.32 228.59 26.33 24.29 33.17 18.52 19.81 10.99 10.78 29.26 15.72 15.25 16.61 12.89 37.58 15.28 34.85 13.16 7.82 45.81 12.33 12.67 12.4 15.38 10.45 14.19 35.57 19.25 52.61 2.63 5.57 28.61 12.36 11.69 6.65 0.0 46.59 5.03
27.55 9.73 4.46 4.06 2.91 1.9 4.71 0.16 0.18 0.08 0.17 0.22 1.27 16.07 7.07 6.67 15.81 7.03 22.62 10.75 5.44 3.55 2.98 6.33 24.22 5.6 29.91 5.67 20.41 61.0 9.46 6.95 5.24 10.19 7.12 27.35 29.64 9.58 18.45 4.89 17.8 18.59 6.61 1.94 3.89 2.89 46.04 1.01
13.92 7.65 30.04 35.3 28.05 21.66 32.95 18.32 26.29 11.16 19.36 143.25 13.03 10.53 15.63 16.54 13.9 6.9 16.28 10.84 7.43 8.06 7.14 10.36 9.95 14.03 15.51 9.59 26.33 9.76 2.69 4.69 6.91 4.74 3.87 8.39 27.72 7.13 38.63 19.09 26.99 6.95 4.4 5.19 7.28 12.94 31.56 3.37
15.11 10.39 18.17 17.63 10.49 0.95 11.81 0.0 0.03 0.13 0.17 0.04 0.25 7.58 11.56 6.19 5.2 6.2 4.15 9.38 4.24 6.92 10.88 5.63 3.73 5.48 3.62 12.93 58.81 3.18 8.33 8.97 5.89 5.06 10.14 4.78 7.59 8.43 9.96 4.4 0.0 7.8 8.49 13.53 8.18 0.0 72.49 9.79
AT1G31350 (KUF1)
 9.09 5.99 0.21 0.39 0.3 0.48 0.37 4.53 6.91 5.28 4.72 125.48 7.64 7.88 9.98 23.39 40.1 5.11 14.8 6.3 6.49 6.06 4.0 7.29 0.7 12.42 5.85 8.99 2.8 0.21 1.66 5.6 5.11 10.28 4.23 6.56 2.92 8.18 20.96 3.66 2.05 15.2 14.33 11.92 3.16 9.26 18.51 3.61
1.22 0.4 2.71 0.97 1.87 2.36 1.38 1.11 0.44 0.14 0.18 0.0 0.19 0.22 0.12 0.06 0.16 0.0 0.54 0.55 0.0 0.12 0.0 0.02 0.14 0.05 0.28 0.56 0.64 0.33 0.01 0.0 0.08 0.1 0.15 0.29 0.49 0.27 0.08 3.04 2.86 0.91 0.54 0.18 0.06 0.0 34.46 0.19
AT1G55580 (LAS)
 1.0 1.73 0.0 0.0 0.0 0.0 0.04 0.0 0.03 0.0 0.0 0.0 0.05 0.31 0.19 0.02 0.03 0.0 0.04 1.09 0.0 0.08 0.36 0.27 0.05 0.08 0.0 0.96 0.01 0.02 1.17 0.48 0.48 1.04 8.7 0.02 0.18 0.69 0.01 0.0 0.0 1.16 0.15 0.17 1.97 0.52 94.72 0.18
29.24 7.42 50.64 40.94 42.4 24.63 41.14 3.13 3.41 2.09 3.84 64.97 7.77 5.06 4.01 4.38 3.71 4.75 3.29 7.18 7.34 5.8 9.79 4.05 3.84 3.31 2.28 8.72 4.49 6.11 6.47 7.92 3.05 3.9 5.73 4.06 5.14 7.9 2.59 2.42 21.77 7.41 7.46 20.73 6.72 0.0 23.95 14.41
AT1G76900 (TLP1)
 11.72 35.49 26.67 31.8 32.56 25.02 36.73 5.81 2.9 0.74 0.9 1.07 4.31 24.66 11.61 21.57 20.65 11.36 13.64 30.99 23.35 17.37 19.37 17.1 17.81 16.66 50.28 34.87 20.31 10.93 19.42 20.36 20.44 23.81 21.01 28.09 37.16 21.05 34.75 18.39 3.27 70.92 31.4 19.09 26.46 88.37 150.25 12.12
69.23 48.95 92.08 103.95 90.94 55.46 130.23 52.86 62.71 46.05 49.66 8.98 16.15 56.9 88.47 27.74 53.33 62.33 101.56 44.93 64.31 28.24 39.08 31.5 11.42 26.82 47.44 30.22 230.92 9.78 51.31 49.59 27.53 33.32 57.38 32.06 34.46 38.74 35.81 8.9 15.56 39.5 55.56 94.56 63.91 209.93 355.22 95.86
AT2G26430 (RCY1)
 33.31 38.3 39.26 35.31 29.76 16.62 32.7 28.4 21.11 20.53 16.04 151.51 22.02 31.13 28.28 22.87 28.85 20.16 27.27 47.9 30.15 22.02 23.95 21.9 15.12 23.56 28.53 28.58 83.07 20.92 28.63 19.07 19.23 24.63 28.38 28.64 67.17 30.81 73.0 23.13 52.77 24.11 29.18 37.66 22.4 52.88 96.31 18.33
AT2G27050 (EIL1)
 13.98 9.97 0.16 0.12 0.45 0.75 0.4 10.29 14.56 9.98 9.49 460.07 23.57 27.44 26.83 10.1 14.32 25.82 12.18 14.42 16.77 24.45 22.44 7.4 19.91 8.8 2.48 6.74 2.85 15.94 12.89 33.6 56.98 44.34 12.97 36.44 20.65 25.96 84.31 7.4 2.58 40.57 54.67 34.67 28.83 0.11 48.55 11.94
41.37 46.18 30.76 40.28 35.95 37.08 43.87 9.71 7.12 3.34 5.3 121.69 19.47 26.06 13.4 40.4 39.44 28.08 20.84 68.11 30.37 22.11 30.44 49.79 17.14 39.48 25.95 62.76 111.62 14.44 68.31 25.26 14.63 20.53 46.2 48.96 62.67 27.57 76.22 1.53 4.34 28.05 25.86 24.66 20.58 2.33 159.41 18.96
123.34 66.4 90.29 99.36 111.04 109.92 116.54 136.02 204.19 185.72 216.92 10.58 148.39 92.82 98.96 69.62 118.8 105.52 167.26 105.51 113.97 55.16 67.93 93.51 69.45 83.06 142.56 95.93 73.33 80.04 86.33 92.08 61.39 121.88 82.29 167.04 247.62 112.78 123.01 191.85 108.04 190.41 166.41 87.16 115.1 407.08 818.42 88.69
25.64 17.58 47.15 53.18 39.08 41.58 57.45 37.27 42.79 28.54 48.82 130.94 34.99 19.93 30.7 12.85 18.15 21.17 17.49 17.82 20.92 14.35 15.97 15.98 9.24 15.08 27.92 12.19 31.01 8.8 14.76 13.71 11.49 20.82 14.25 25.62 35.23 20.72 28.51 3.59 17.64 29.51 28.63 15.12 20.69 51.66 63.78 15.03
22.33 23.5 29.51 30.66 45.53 57.33 41.93 87.83 80.01 35.71 61.39 88.38 27.74 30.23 26.17 20.08 25.03 24.95 38.64 21.56 21.72 14.73 16.44 22.51 13.36 23.48 50.21 32.09 19.3 9.63 21.35 25.94 18.68 22.14 20.65 29.46 46.29 23.16 50.57 9.69 19.26 36.58 33.46 25.95 23.4 68.63 100.06 17.71
215.06 40.54 699.4 661.3 539.85 290.6 525.87 338.17 332.17 65.69 136.07 77.0 396.27 31.82 62.62 43.21 41.82 37.4 195.1 56.69 39.25 31.24 33.91 71.73 104.78 46.89 39.8 605.12 131.23 171.81 48.47 66.12 34.18 53.34 50.67 119.5 204.81 64.21 135.5 108.94 13.99 85.87 82.42 91.44 77.96 144.82 1079.98 122.87
9.32 15.45 16.02 9.9 10.72 5.67 8.5 1.08 0.45 0.07 0.07 0.22 2.12 11.29 5.57 6.56 12.82 12.01 6.03 14.15 7.7 7.31 7.17 8.59 2.97 8.07 11.05 9.83 44.4 2.14 14.47 7.5 5.16 8.34 10.72 7.67 9.35 8.9 7.89 2.21 7.3 9.8 15.38 11.98 8.0 29.15 67.66 7.85
41.22 41.59 5.18 2.36 8.45 24.44 3.82 46.38 69.41 35.34 60.38 276.36 43.63 35.87 22.05 26.99 48.35 17.45 38.8 42.64 50.28 16.19 15.05 31.01 9.19 27.61 30.95 27.86 31.87 8.43 32.28 17.7 10.47 17.99 14.35 52.52 32.63 32.27 27.88 44.45 10.18 40.43 41.79 14.7 12.4 28.74 173.61 16.21
164.84 86.59 38.9 31.83 33.27 32.15 32.34 54.09 63.93 61.43 69.46 897.81 63.22 63.27 53.84 40.26 39.42 25.39 49.28 89.5 37.97 41.32 40.69 34.43 26.5 36.53 77.87 44.05 82.95 30.89 49.36 49.42 50.48 74.06 56.7 32.07 75.62 64.39 256.59 80.84 70.04 77.03 64.05 54.93 33.75 138.62 227.08 26.78
28.01 19.11 4.66 2.65 3.46 5.34 2.95 5.2 9.93 2.86 5.69 48.37 2.15 17.44 13.75 20.48 19.8 16.14 12.43 27.58 20.86 18.49 15.8 19.08 34.12 23.37 26.37 10.02 58.88 37.11 18.78 23.56 12.29 20.94 14.71 17.47 42.6 13.05 32.54 4.54 8.01 15.19 15.51 11.25 13.54 68.72 67.32 4.5
28.38 32.04 29.62 25.67 35.39 38.91 32.58 50.64 47.38 31.54 33.98 317.7 20.02 30.4 22.6 24.27 30.43 21.19 32.19 32.65 20.14 14.27 12.36 14.86 16.51 18.7 35.72 14.64 35.96 19.8 17.09 14.5 15.36 21.44 11.36 21.77 34.33 20.71 51.66 3.09 3.32 41.53 28.83 19.62 11.84 33.02 59.39 9.26
100.31 25.01 28.44 33.21 26.7 27.48 28.34 20.65 27.57 12.16 22.62 205.42 19.85 27.77 54.18 21.72 22.89 15.69 18.71 23.37 22.02 12.68 14.02 20.87 14.51 20.49 50.02 16.75 90.57 13.31 19.33 17.09 17.88 19.83 11.52 18.35 32.32 20.88 28.95 14.49 76.89 40.41 31.38 17.98 16.98 15.75 55.29 12.24
17.91 26.54 10.5 7.78 9.04 9.96 9.89 35.31 44.56 20.91 37.16 5.64 14.76 38.76 57.64 34.25 40.83 24.46 42.23 32.54 55.7 27.25 29.13 29.19 8.39 28.38 65.37 21.14 121.7 3.96 27.59 38.19 19.67 22.25 24.4 35.32 30.84 22.02 24.66 4.9 2.59 38.5 26.56 20.56 25.74 21.03 116.89 15.32
10.8 6.3 25.02 24.89 23.66 17.94 22.15 14.77 8.95 4.79 5.72 83.84 15.32 9.74 7.48 6.1 10.85 12.79 13.48 7.3 7.31 4.86 5.99 7.03 8.32 6.74 21.62 14.03 11.67 9.3 4.8 15.25 6.47 13.77 5.89 7.86 8.27 10.78 8.53 3.66 3.43 35.45 31.0 23.25 17.93 138.25 92.15 20.63
AT4G21160 (ZAC)
 67.9 33.85 6.43 10.27 21.55 72.18 22.74 130.01 125.7 41.11 86.18 206.54 73.2 47.62 54.97 33.98 36.86 39.45 30.24 34.43 58.95 22.17 32.93 22.43 14.1 23.81 77.32 23.88 21.48 10.38 22.9 39.25 20.53 38.94 23.95 21.97 47.82 28.84 66.94 26.68 68.49 69.52 73.63 24.98 35.52 0.27 83.13 27.01
AT4G32690 (GLB3)
 19.93 12.22 49.18 55.93 38.83 16.74 53.32 0.65 1.38 0.49 1.1 15.75 1.7 28.16 3.73 20.23 10.4 10.38 7.52 10.44 9.64 9.24 9.19 15.62 7.32 14.12 36.9 27.26 49.6 1.24 11.46 40.79 12.76 32.64 19.27 20.28 15.77 21.24 15.24 4.67 33.98 18.32 11.39 17.54 15.08 106.15 141.31 14.7
53.43 28.88 0.19 0.2 0.27 0.63 0.02 0.02 0.0 0.01 0.0 0.0 0.0 32.77 11.18 19.32 6.06 6.26 11.56 52.17 23.21 21.09 41.0 21.95 26.62 27.05 21.28 12.25 7.34 11.18 21.99 16.36 3.99 25.95 32.53 52.94 234.94 43.65 84.62 16.69 49.69 11.31 38.16 16.55 5.92 363.58 1128.93 5.11
25.2 2.36 0.67 1.0 0.31 0.41 0.39 0.31 0.19 0.07 0.26 1.85 0.97 1.78 0.7 1.46 1.54 0.79 1.03 1.79 0.52 0.17 0.19 0.34 0.45 0.3 1.78 1.72 0.92 0.3 1.03 2.13 0.53 1.75 0.16 0.15 1.21 0.99 1.72 1.65 2.58 11.44 1.39 1.46 0.52 0.0 146.15 0.34
30.91 30.14 12.88 8.62 11.8 13.69 7.48 62.89 17.42 2.99 4.1 0.06 8.43 50.88 89.12 24.99 22.3 17.77 43.37 22.35 15.52 9.33 5.79 20.12 12.66 28.11 175.4 6.48 16.42 0.08 13.19 18.96 16.28 27.17 5.38 7.7 96.65 15.27 70.65 10.23 33.48 78.86 36.95 3.78 7.28 37.74 138.63 5.52
AT5G02320 (MYB3R-5)
 5.13 6.05 5.97 3.96 3.61 1.49 2.73 2.11 2.34 1.91 2.13 8.36 3.04 4.55 6.06 1.71 2.56 1.64 2.81 5.27 2.53 2.13 3.89 1.91 3.3 1.62 2.26 4.34 2.75 2.61 3.67 2.16 1.66 2.26 3.72 1.94 3.37 2.95 3.35 1.65 0.63 3.97 3.21 6.85 2.7 0.0 69.56 2.71
83.23 41.17 42.48 47.39 34.9 21.72 44.0 13.88 14.73 10.68 12.9 67.88 11.48 25.87 68.01 18.02 24.18 15.54 18.85 47.39 21.46 23.94 32.56 23.83 38.98 20.87 29.23 29.31 175.78 45.76 36.28 33.98 20.22 20.56 33.32 23.42 30.1 26.84 30.82 10.21 9.11 35.41 26.71 45.93 26.77 15.2 149.65 22.73
2.32 2.61 12.91 22.36 14.16 23.66 21.88 11.67 5.15 1.68 1.73 31.2 8.83 4.02 3.48 1.64 1.65 2.46 5.58 2.08 0.25 1.86 2.32 1.44 0.08 1.22 0.49 0.77 9.89 0.3 2.36 1.48 2.0 1.6 1.69 2.32 1.34 1.52 1.96 0.02 0.0 4.13 1.9 4.23 4.37 0.0 10.08 1.69
179.08 47.66 90.37 77.37 69.0 38.62 74.24 26.77 49.71 25.27 58.35 246.79 35.15 36.42 53.22 30.94 36.28 24.49 38.08 49.2 35.85 20.67 30.13 38.65 32.48 33.36 52.31 76.56 44.59 41.24 33.39 28.62 21.31 24.41 36.84 29.19 73.02 38.95 51.43 88.32 6.36 43.89 35.64 59.07 25.79 79.58 173.45 33.93
5.78 10.05 16.93 23.2 14.27 9.2 19.44 6.1 7.29 3.0 7.58 53.5 5.37 7.93 2.31 6.48 5.86 5.38 6.38 9.27 8.88 5.25 4.87 5.72 9.88 5.08 10.43 6.49 6.45 13.25 7.76 8.28 3.08 7.01 6.35 5.32 15.35 9.02 14.68 2.71 5.42 7.87 6.44 13.86 4.87 0.0 20.96 6.15
7.57 13.14 8.32 5.43 13.29 23.44 8.91 51.72 47.62 22.17 31.65 30.42 58.99 28.01 27.64 13.7 16.72 14.12 34.31 9.73 62.01 4.37 4.8 12.81 6.84 14.25 46.8 2.16 23.59 3.22 11.63 6.35 5.27 6.68 7.23 12.39 10.55 10.79 19.75 10.7 15.16 41.94 16.27 3.4 5.7 0.19 41.92 3.6

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)