Heatmap: Cluster_276 (HCCA cluster)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Root (elongation zone)
Root (meristematic zone)
Root (stele)
Root (tip)
Root
Leaf (3rd leaf of seedling)
Leaf (3rd leaf)
Leaf (apex)
Leaf (bundle sheath)
Leaf (mesophyll)
Leaf (Seedling)
Leaf
Internode
Stalks
Shoot
Shoot (apex)
Tassels (primordia)
Tassels
Anther
Pollen
Ear (immature)
Ear (inflorescence)
Ear (leaf)
Ear (primordia)
Ear
Silks
Kernels (germinating)
Kernels
Maternal transfer zone
Nucellus
Embryo
Endosperm (transfer layer)
Endosperm
Seeds
Coleoptyle (5 day)
Seedling
Whole Plant
Zm00001d000162 (GRMZM2G073219)
-7.1 - -0.16 -0.54 1.16 1.44 2.35 -4.08 - - -4.65 -0.11 - 1.54 -1.71 1.62 1.89 -5.31 0.09 -3.73 -1.72 -0.87 - -1.5 -3.81 1.84 0.18 -2.08 - 1.34 -2.87 - -1.23 -4.87 -8.14 0.55 1.23
- - - 2.0 1.8 0.69 - - - - 2.81 0.04 - - - 2.05 3.41 - -1.75 -3.49 -2.69 - - - - - - -1.99 - - - - 0.1 -2.79 -2.1 -1.93 1.38
-0.77 - - - 1.28 - - - - - 4.09 -0.85 - - - 0.86 - - -0.7 - -3.12 - - - - - - - - - - - 0.48 -2.91 2.15 -2.59 2.95
- - - - - - - - - - 5.13 0.97 - - - -3.28 - - - - - - - - - - - - - - - - - - - - -
Zm00001d007771 (GRMZM2G703437)
-0.86 -1.22 1.54 -0.12 0.04 -1.84 -4.0 -0.06 - -1.01 2.41 0.04 - 0.39 -0.65 0.62 0.04 0.36 0.07 -2.84 -0.71 -0.27 - -1.12 0.15 -1.65 0.98 0.09 - 0.75 0.35 1.53 -0.86 0.1 -1.94 0.67 -1.56
- - - - - - - - - - 4.16 2.07 - - - -2.46 - - 1.83 - - - - - 1.25 - - -0.1 - - - - 2.78 - - 0.07 -
- - - - 1.6 - 1.69 - - - 3.66 0.88 - - -0.47 2.2 - 2.27 -0.08 -2.42 0.92 - - - - - - 1.49 - - - - -2.57 - - -3.03 -
Zm00001d009327 (GRMZM2G384871)
- - -2.17 -1.9 -0.55 1.69 2.11 -5.84 - - -1.91 -0.7 - -0.42 -1.2 1.65 1.89 - 0.04 -3.11 -1.58 -1.15 - -1.7 -3.38 1.51 -1.56 -1.65 - 1.7 -3.05 1.39 1.1 0.99 -4.02 0.31 1.1
Zm00001d009860 (GRMZM2G314712)
- - - - - - - - - - - 0.4 - - - -2.41 - 3.97 3.07 - - - - - - - - 0.87 - - 3.01 - - - 0.6 - -
- - - - -2.2 -0.27 - - - - 1.75 -2.58 - - - -1.29 0.37 - 0.46 - 0.32 - - - - - - - - 4.59 1.74 - -1.87 - -1.82 -2.43 -
Zm00001d012784 (GRMZM2G353990)
- - - - -7.09 -2.19 - - - - 0.14 -6.5 - 4.72 - -1.31 -2.91 - -0.21 2.57 - - - - -2.15 -0.89 - -2.89 - - - - -4.73 - -5.57 0.04 -
- - - - - - - - - - - - - - - 5.21 - - - - - - - - - - - - - - - - - - - - -
2.41 - - - 0.77 - - - - 2.4 - 1.66 - - -1.63 1.84 1.79 1.88 1.57 - -0.36 - - 0.24 - - - -1.67 - - - - - - 0.92 0.74 0.77
- - - - -5.85 - - - - - 3.93 -2.18 - - - 2.03 - 0.51 3.68 -1.13 - - - - - - - 0.62 - - - - -0.38 - - -1.0 -
- - - - -0.11 - 0.23 - - - 2.26 -1.19 - - - 0.24 3.94 - 2.15 - -0.7 - - 0.57 -0.09 - - -1.13 - - - - - -0.64 -0.0 0.6 1.07
-5.78 - -1.23 2.85 0.78 - - - - - 1.26 0.2 - - -2.96 1.48 - 1.3 0.04 -0.14 0.71 - - - 0.43 -0.44 -0.67 1.46 - 2.63 -3.02 - 0.13 -2.07 - 0.27 -0.26
-1.15 -0.83 0.9 - -0.35 -0.97 -1.51 -2.46 - -0.83 2.19 0.41 -1.62 1.22 -0.78 -0.32 -0.1 1.24 0.63 -1.23 -2.5 0.59 -0.77 0.29 -0.99 0.16 0.42 0.5 - 0.4 0.1 - -0.13 1.63 -2.12 0.47 -0.59
-1.89 0.29 1.33 - -0.82 - - - - -0.75 2.6 0.21 - 1.69 -0.51 0.2 1.53 - -1.13 - - - 0.55 1.44 - - - 0.65 - - 2.28 - -0.21 1.27 -1.67 0.62 -1.0
-3.14 - -1.03 - 3.86 -2.15 - - - - - -3.81 - - -3.06 4.1 - -2.14 -2.87 - -3.96 - - 0.16 -2.02 - - -2.44 - 0.79 -2.89 - - - -1.65 -4.44 -2.84
- - - - -1.89 - - - - 2.12 3.05 -1.04 - - 0.24 0.34 - - - 0.9 -0.08 - - 1.36 - 2.81 - - - - - - - - - -0.44 3.01
-1.49 - -1.41 - -0.92 - - - - - 2.98 0.86 - 1.72 -0.32 -0.61 -1.49 1.27 -2.49 - - - 2.32 - 0.52 - 0.45 0.56 - - 1.08 - -0.55 1.4 - 1.25 0.35
- - - 3.58 -3.46 2.27 - - - - 4.01 - - - - -3.05 - - 0.96 - - - - - - - - -1.41 - - - - - -0.29 - -0.43 -
0.68 0.22 -0.73 - 0.0 -3.98 1.11 - -3.78 -3.6 1.88 -0.49 -0.69 1.04 -1.62 -0.16 0.87 -0.47 -0.37 -0.47 -0.95 -0.34 -2.74 1.13 -1.25 0.26 -0.58 0.65 - 2.0 0.8 - 0.47 1.33 -2.94 -1.4 -2.02
- - 0.62 - -0.75 -0.48 - - - - 4.06 2.04 - - - -1.23 - - -0.28 - - - - - - - - 2.34 - - 0.15 - - 0.5 -2.26 -1.79 2.01
- - - - -0.01 0.41 - - - - 2.07 -0.71 - 1.96 - -5.21 - 0.29 - - - - 4.53 - - - - - - - - - - 0.39 -1.87 - -
- - -1.29 - -0.12 -1.07 - - - - 3.69 -2.16 - - - 0.96 -0.04 - -3.03 -4.5 4.04 - - 0.7 - - - -3.84 - - - - -3.74 - -1.13 -1.61 -
- - - 2.11 -0.98 1.91 -0.08 1.74 - - - -0.17 - - - 0.81 2.48 - -1.05 - -2.59 0.63 - -0.48 -1.68 2.16 - -4.1 - 2.07 - - -3.6 - -0.68 -0.41 1.32
Zm00001d023995 (GRMZM2G119465)
-9.01 - -5.73 1.35 1.53 0.3 -3.89 -6.2 -2.08 -3.01 1.24 2.38 -3.72 -3.74 0.68 0.63 -6.87 -0.88 -0.68 -5.25 0.73 - 2.64 -3.61 0.96 1.68 -2.53 -0.89 - - -3.96 -1.13 -1.77 -1.01 -6.95 1.39 -8.33
- - - 4.17 -0.99 1.93 1.34 - - - 2.42 0.7 - - - 1.01 - - - - - - - - - - - - - - - - - - - 1.67 -
- - - - 0.16 - 3.69 - - - - -4.2 - 2.17 - 1.87 - - 2.52 - - - - - 1.54 - - 0.28 - - 0.89 - 1.64 - - - -
Zm00001d025811 (GRMZM2G330519)
- - - - - - - - - - - -0.37 - 3.95 - 1.73 2.17 - - -0.18 - - - - - - - 2.06 - - - - - - -0.91 2.87 -
- -2.61 1.8 - -1.24 -3.78 - - - - 3.74 0.0 - -1.66 -1.02 -1.2 - - -3.23 - -3.25 - - - -1.13 - 2.86 -1.85 - 2.56 0.87 - -0.76 -4.44 - -1.43 -1.72
Zm00001d029403 (GRMZM2G106834)
- - - 0.5 -3.57 0.08 - - - - -1.36 -4.95 - - - 1.01 - - - 4.56 - - - -3.8 -3.3 - - -4.4 2.98 - - - -2.93 - -3.04 -6.19 -
0.02 1.61 0.71 - -1.16 -2.72 - -0.18 -1.64 -2.34 1.32 -0.39 -0.76 - -0.11 -0.5 -0.08 -0.06 -2.99 - - - -1.49 1.54 -1.14 - -1.33 0.64 - - 2.01 - 2.09 2.64 - 0.64 -
- - - - 2.11 -0.15 -0.51 - - 0.52 3.17 2.98 - - 1.62 -1.5 1.35 - -1.7 - -0.28 - - - - - 0.02 -2.82 - - -0.56 - - 0.05 - 1.34 -1.69
- - -1.06 - 1.7 - 0.91 1.61 2.41 1.38 2.74 2.18 - - 0.32 -2.14 - -1.01 -3.9 -5.19 - - 0.14 - -1.38 - - -5.65 - - - - - -5.18 - -0.64 2.31
-2.84 -0.73 - - 0.38 - - - - - 1.84 -1.74 - - -3.93 0.77 -2.33 -1.83 0.59 -1.59 -1.35 -0.25 - -1.6 0.16 - - -1.63 3.71 - - - -1.82 - 1.01 -1.31 3.03
- - 2.16 -1.64 0.72 - - - - - 1.08 -1.88 - 2.06 - 1.91 -1.3 -1.96 -1.77 -2.13 -6.55 - - -0.75 - - 2.85 1.72 - - - - -1.02 -0.62 - -0.75 2.64
-1.31 0.59 0.58 -0.71 -0.08 - -1.65 -0.78 -0.33 -2.22 - 0.28 -1.77 -1.31 1.04 -0.22 1.14 0.33 -0.36 - -2.63 - 0.5 0.61 -2.85 1.51 -0.18 0.07 - 1.58 1.62 - 1.09 1.66 - 0.54 -2.02
- - - - 0.72 0.98 0.76 - - - 1.48 -0.32 - -0.65 -8.07 0.93 1.66 - 2.48 -4.21 1.09 - - - -3.73 3.4 - -2.15 - - - - -4.16 - -2.71 -0.1 1.38
-1.94 -1.01 -0.51 -0.37 -0.82 -2.04 -1.61 -0.48 - -3.01 2.36 -0.97 - 0.83 -2.31 -0.16 0.02 -1.64 0.81 -5.99 -2.48 - 0.65 0.6 -3.21 0.15 -2.45 -0.09 - 0.59 0.65 2.02 0.85 1.88 - -0.14 1.02
- - 1.08 - 2.2 - - - - - - 0.32 - 0.7 - 2.31 - - - -0.86 -1.43 - - - 1.5 - 3.25 -0.18 - - - - 1.69 - - -2.78 2.3
- - - - -0.95 - - - - - - -0.71 - - 0.73 -0.08 - - 0.21 - - - - 0.7 - - - 0.75 - - 2.71 - 2.56 3.91 -2.07 0.16 -
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- - - - 1.64 - - - - - - 0.41 - - - 1.68 - - - - 4.74 - - - - - - - - - - - - 1.42 - - -
0.13 -0.54 0.85 0.44 -0.91 -0.11 -3.35 -0.34 -0.5 -3.66 3.05 0.16 - 0.45 -1.13 -0.46 0.66 -0.44 -0.69 -4.06 -1.96 1.1 -2.35 0.08 -1.8 2.05 0.11 0.71 - - -0.19 - -0.66 -1.07 - -0.05 -2.08
-1.15 1.45 0.32 - -0.69 -1.88 - -0.71 - - 2.59 -0.71 - - -0.4 -0.21 0.38 -2.13 0.14 - -4.2 -0.76 - 0.72 -1.26 -0.81 -0.16 -0.1 - - 1.97 1.36 0.59 2.49 -2.84 -0.9 -0.34
- - - -1.63 -1.72 -0.93 -0.72 - - - 0.87 -2.17 - 3.82 -7.79 0.05 1.01 -3.18 1.95 -0.32 0.44 -3.11 1.67 - -4.42 1.41 - 0.01 - - -3.58 - -1.56 - -1.99 0.93 -1.83
-1.16 -0.78 0.5 - -1.3 -3.17 -1.34 -1.58 -2.31 -1.46 1.42 0.67 - 1.5 0.36 -0.83 0.03 1.92 0.48 -4.27 -4.02 -0.62 0.17 1.2 -0.54 - -1.2 1.16 - - 1.09 0.33 1.39 1.37 -3.94 0.42 -4.08
-2.46 - -1.52 - -2.29 -1.44 -3.19 - -1.39 -2.09 3.14 -1.37 - - -2.56 0.39 - -2.25 -1.45 -3.16 -3.11 1.34 2.89 -0.26 -1.34 1.29 -1.53 -0.1 - - - 2.46 -5.09 -0.29 0.58 -1.04 -1.13
Zm00001d041915 (GRMZM2G360792)
- - - - 0.41 - - -0.0 - - - -5.86 - 4.57 - 1.89 - - - -3.95 - - - - - - - -0.88 - - 0.54 - -2.12 - - -6.99 2.29
- - - - 3.37 - - - - - - 0.32 - - - 1.64 - - - - - - - - - - - - - - 4.48 - - - - - -
- - - - 1.33 - - 2.15 - - - -1.58 - 0.77 - 2.43 - - -1.66 -2.4 - 1.94 - - - - - - - 2.96 2.63 - -1.28 - - - 1.96
- - - - 1.37 -0.24 - -1.85 - - - -2.35 - - - 2.14 -1.96 - 1.12 -3.9 -3.31 0.11 3.88 - 1.38 - - -1.65 - - 0.23 - -2.98 - 1.05 -0.13 1.6
-2.22 -1.42 0.05 - -2.56 - - 0.74 - - 2.57 -2.3 - 1.79 -2.17 -1.24 -0.9 -0.1 -2.99 0.31 - - 1.6 -0.67 - - 0.18 1.62 - - -0.59 1.8 1.46 2.37 -3.47 -1.36 -
- - - - -0.58 1.62 0.83 - - - 2.93 -0.25 - - - -1.68 2.36 - - - - - - -0.14 - - - - - - - - -0.98 - 3.71 1.62 -
-1.66 -1.98 0.6 0.07 -0.11 -1.82 -2.71 -3.31 -2.75 - 1.53 -0.58 -0.98 - -1.38 -0.26 0.84 -0.72 0.62 -3.13 -2.32 - 0.61 0.13 -3.67 0.91 -1.0 -0.97 2.61 -0.01 0.95 0.77 -0.23 1.09 -0.08 -0.22 0.69
- - - - 0.99 -1.65 - - - - 4.08 0.04 - 0.01 - 2.54 - - -1.26 0.89 1.16 - - - -0.21 - - 0.47 - - 0.49 - -0.71 - - -2.22 -0.04
- - - - 0.54 2.33 - - - - 3.0 0.41 - - - -0.45 3.88 - 0.92 -0.74 - - - - - - - - - - 1.12 - - - - 0.04 -
- - - 2.28 2.24 -4.09 -6.0 - - - 1.86 0.55 - - -3.99 2.78 -1.23 -5.84 0.78 -4.45 0.24 - - -4.77 -3.58 -1.01 - -0.44 - -0.09 -3.56 - -1.73 - -0.12 -3.15 3.04
- - - - - - - - - - 5.13 0.91 - - - -2.62 - - - - - - - - - - - - - - - - - - - - -
Zm00001d051483 (GRMZM2G003953)
-7.61 - -1.68 -3.59 0.6 -2.3 -1.24 -4.13 -2.72 -4.65 3.49 -0.23 -1.48 2.74 -2.68 0.74 -4.85 -2.11 -1.27 -9.23 -2.78 -3.11 -2.21 -3.35 -2.29 -2.96 -2.05 -0.74 - 0.54 -3.95 - -1.29 -1.07 -5.55 -0.71 2.97
Zm00001d051631 (GRMZM2G110119)
- - - - - - - - - - 3.71 - - - 0.76 -1.84 - - - - - - - - - 3.93 - - - - - - - 0.93 1.53 0.85 -
- - - - 0.4 1.35 - - - - - -4.33 - - - 2.03 - - - 0.39 - - - - -1.19 - - 1.59 - - - 4.11 1.88 1.68 - - -
- - - - -5.04 -0.25 0.32 - - - - -0.02 - 3.78 - 1.02 - - - - -1.75 - - - -1.66 - - -2.86 - 4.04 - - - - - -0.23 -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.