Heatmap: Cluster_10 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Egg cell
Ovule
Uninucleate microspore (Col-0)
Uninucleate microspore (Ler-0)
Pollen (bicellular, Col-0)
Pollen (late bicellular, Col-0)
Pollen (bicellular, Ler-0)
Pollen (tricellular, Col-0)
Pollen (tricellular, Ler-0)
Pollen (mature, Col-0)
Pollen (mature, Ler-0)
Sperm
Pollen tube (Col-0)
Flower (receptacles)
Flower (floral buds)
Flower (sepals)
Flower (petals)
Flower (stamen filaments)
Flower (anthers)
Flower (carpels)
Flower (stigmatic tissue)
Pedicel
Axis of the inflorescence
Silique
Silique (senescent)
Pods of siliques
Pods of siliques (senescent)
Embryo
Endosperm
Seed
Seed (young)
Seed (germinating)
Seedling
Seedling (etiolated)
Meristem
Stem (internode)
Stem (internode, senescent)
Stems
Leaf (rosette)
Epidermis cells
Mature guard cells
Root (differentiation zone)
Root (elongation zone)
Root (meristematic zone)
Root (apex)
Root (stele)
Root (QC cells)
Root (tip)
3.6 -2.71 3.19 2.58 2.52 -1.47 2.52 -3.26 -3.1 -2.1 -2.34 -2.79 -1.26 -1.66 -1.65 -1.06 -2.86 - -1.67 -1.49 -0.44 -2.02 - -1.66 - -2.12 -3.6 -0.56 -0.08 -5.52 -2.44 -5.37 -1.96 -3.18 -0.75 -2.72 -2.74 -1.71 -3.05 -1.94 - - - - - - -3.27 -3.23
2.87 -3.73 3.44 3.12 2.63 0.71 3.1 -4.36 -4.26 -3.53 -4.36 - - - -4.83 -5.87 - - 1.32 -3.76 - - - -2.26 -4.63 -2.56 - -4.2 -0.09 -7.68 -3.42 -3.54 -7.96 - -9.6 - -2.87 -5.27 - - - - - - - - - -
1.6 -2.99 3.33 2.38 3.29 1.72 2.6 -1.02 -1.98 -1.85 -1.46 1.38 -1.63 -2.81 - -2.94 -3.42 - -0.86 -2.99 - -2.74 - -2.99 -2.2 -3.28 - -0.89 0.04 -1.1 -6.67 -4.08 -3.63 -3.43 -1.88 -1.64 -1.25 -1.99 -2.8 - - -3.23 -2.58 -1.23 -4.14 - - -3.75
2.7 0.58 1.25 1.11 0.23 -1.44 0.75 -0.02 -0.55 -0.35 -1.27 2.02 -0.17 0.13 0.85 -0.46 -0.63 -1.43 0.31 0.35 -0.16 -0.5 -0.05 -0.85 -4.5 -0.7 -0.52 -0.48 -0.46 -7.8 0.35 -1.2 -0.52 -1.37 -0.52 -0.69 -0.23 -0.45 -1.07 -1.33 -1.97 -1.08 -0.42 -0.19 -0.51 -5.63 0.14 -0.78
3.62 0.59 1.03 0.33 0.28 -2.24 0.04 -7.17 -6.03 -7.31 -6.7 -5.14 -3.42 -0.09 -0.42 -0.02 -0.77 -1.74 -1.58 0.91 -0.24 0.78 1.11 -1.08 -0.72 -1.03 -2.24 0.69 0.41 -0.86 0.45 0.64 -1.09 -1.01 0.36 -0.87 -0.0 -0.42 -0.73 -3.79 - -1.96 -2.42 1.21 -0.13 - - -0.55
3.4 0.45 2.07 2.17 1.65 0.42 1.97 -2.95 -2.23 -2.96 -1.51 - -0.26 -0.3 -1.18 -1.05 -1.32 -2.09 -0.45 0.03 -1.06 -0.86 -2.03 -1.13 -0.72 -1.22 -0.98 -0.43 0.09 -0.48 -0.07 0.05 -1.25 -1.62 -0.79 -1.6 0.23 -0.63 -1.63 -2.15 - -3.11 -2.48 -0.79 -3.27 -4.28 -5.31 -1.56
2.0 0.36 2.77 1.63 2.14 0.61 1.45 -3.84 -3.41 -4.28 -4.3 -0.32 -2.4 -0.3 -0.37 -0.77 -0.47 -0.35 -0.55 0.24 0.02 -0.44 -0.4 -0.64 -2.39 -1.14 -1.68 -0.1 -0.2 -2.33 0.36 -0.49 -1.26 -0.29 0.91 -0.39 -0.2 -0.26 -2.9 -3.57 -4.83 -0.24 -1.13 -0.22 -0.34 - - -1.19
5.16 -2.92 - 1.67 -1.22 -2.64 0.78 -2.51 - - -2.3 -0.32 0.36 - - - - - - -4.12 - - - -2.9 -0.01 -3.35 - -2.0 0.54 - - - - - - - - -5.67 -6.11 0.1 - - - - - - - -2.92
5.57 - - - - -2.35 - - - - - - - -2.6 - - - - - - - - - - - - - - -3.25 - - - - - - - - - - - - - - - - - - -
5.5 -2.88 -5.75 -2.65 -3.15 -4.17 -2.98 - - - - - - -4.06 -4.2 -5.51 -3.35 - -6.89 -3.71 -3.63 -4.22 -3.71 -4.96 -5.68 -6.35 -2.83 -3.15 -4.04 -3.05 -4.37 - -4.98 -3.75 -4.7 -4.26 -3.06 -3.75 -2.47 -1.65 - - - - -5.18 - - -5.39
AT1G58450 (TPR6)
5.46 -3.81 - - - - -0.83 - - - - - 0.68 - - - - - - -1.77 - - -0.48 - - - - - - - - - - - - - - -0.32 - - - - - - - - - -
2.8 0.99 1.13 1.83 0.56 -1.18 1.72 -7.25 -6.16 -7.27 -4.6 - - 0.21 -0.23 -1.04 -1.55 -0.86 -1.29 0.95 -0.98 0.15 0.69 -0.78 -1.55 -1.37 -2.47 1.44 -0.99 -1.08 1.07 -0.21 -1.12 -1.46 1.02 -1.02 -0.54 -0.16 -1.35 -4.51 -1.03 -2.42 -1.29 0.8 -0.57 - 0.04 0.06
3.39 0.73 -0.56 0.51 0.26 0.07 -0.25 -4.94 -2.17 - -3.42 -4.95 -5.02 1.44 1.32 -1.52 -1.62 -2.45 -1.81 0.28 -1.49 0.15 1.83 0.66 - 0.35 -2.76 -0.78 -2.39 -4.64 -0.43 -3.31 -0.77 -1.81 1.24 1.92 -0.47 1.95 -2.36 - - -3.09 -2.81 -2.13 -1.65 - - -1.36
3.78 2.05 1.11 0.33 -0.13 -1.53 -0.1 -5.63 - -6.45 -5.21 - - -0.11 -1.23 -1.68 -1.51 -1.52 -1.67 1.43 -0.55 -0.23 0.89 -0.83 -4.44 -2.34 - 0.59 0.06 -5.27 1.29 -1.15 -0.57 -1.15 1.44 -0.79 -2.7 0.13 -2.44 - - -1.79 -1.72 0.81 -1.56 - - -0.22
2.69 0.69 1.73 2.98 1.72 1.17 2.86 -2.14 -0.73 -3.29 -2.27 -3.25 -2.7 -0.58 0.31 -1.26 -3.04 -4.16 -2.36 -0.59 -1.87 -0.75 -0.58 -2.53 -3.06 -2.42 -2.76 -0.94 -0.49 -4.35 -0.99 -0.3 -1.95 -1.7 -0.53 -2.05 -0.55 -0.77 -2.69 - -1.96 -1.92 -2.4 0.61 -0.9 - - -0.45
2.59 -1.17 2.64 3.37 2.16 1.27 2.84 -0.85 -0.98 -2.22 -2.18 0.8 -0.23 -2.7 -2.98 -3.52 -1.76 -5.09 0.17 -2.61 -5.76 - - -2.11 -6.9 -3.68 -4.0 -3.52 1.83 -6.14 -1.47 -3.68 -7.47 -4.87 - - -4.36 -5.74 -9.08 - -3.04 - - -5.96 - - - -3.91
2.73 -0.04 2.48 2.3 2.1 0.94 1.99 -2.8 -5.17 -3.77 -3.3 -3.5 -5.69 -0.43 -0.48 -0.75 -1.43 -1.01 -1.27 -0.22 -0.7 -0.04 0.4 -1.4 -2.82 -1.79 -2.05 0.67 0.21 -2.44 -0.59 -0.3 -0.85 -0.97 0.36 -2.31 -1.42 -0.68 -1.64 -5.72 -1.42 -2.26 -1.81 0.1 -1.2 - - -1.19
5.37 -8.23 -2.9 -2.82 -3.16 0.11 -3.76 - -5.18 - - 0.44 -3.97 -6.32 - - -5.05 -2.72 -5.47 -3.91 - - - -3.95 - -5.37 - - -3.43 - -4.12 -2.57 -4.73 -1.76 - - -3.02 -3.37 -7.07 - - 0.76 -1.79 - -1.22 - - -
2.72 -2.9 3.19 2.19 2.4 - 2.7 - -1.26 -0.45 -1.72 - -0.93 - - - - -1.61 0.37 -3.55 - - - - - - - 2.55 0.06 -1.93 -3.53 -2.84 -3.56 -3.4 - - -0.17 -4.42 -2.56 - - -0.15 0.91 - -1.07 - - -2.25
3.59 -1.29 1.08 3.61 0.7 0.83 3.17 - - -4.66 - - -2.43 0.08 -0.66 2.27 -2.45 - -2.25 -0.48 - - - -6.83 -3.58 - -0.41 - -4.5 - -5.77 - - - -7.3 - - -4.51 - - - - - - - - - -
3.47 1.49 2.97 2.48 2.22 -2.29 2.28 -5.87 -3.73 -4.88 -5.4 - - -2.74 -2.41 -4.8 -7.02 - 1.18 -0.03 -7.07 -5.89 -6.87 -0.99 - -3.0 - -5.24 -1.13 - 0.26 0.63 -1.17 -0.89 -7.08 -2.54 -1.9 -1.96 -1.79 -1.69 - -2.62 -2.86 -5.27 -1.07 - - -2.79
3.77 -0.45 1.12 1.17 0.91 -0.05 0.8 -2.09 -3.85 -2.3 -4.79 2.45 -0.82 -0.63 -1.77 -2.57 -4.93 -2.47 -2.1 -0.21 -3.86 -1.11 0.1 -0.94 -4.04 -1.85 -7.76 1.15 0.8 -3.92 -0.39 -1.11 -1.97 -1.11 0.88 -0.47 -3.41 0.11 -4.45 -2.15 -5.29 -1.22 -1.47 0.12 -0.71 -5.88 -10.89 -0.57
3.12 -1.32 2.32 2.06 1.83 -0.62 1.95 -0.29 1.58 1.41 2.13 -0.47 -0.67 -4.48 -3.14 -4.58 -5.99 -4.57 1.59 -1.7 -3.49 -4.97 -2.98 -1.66 -4.13 -2.55 -2.76 -2.68 1.48 -3.89 -1.46 -4.59 -3.81 -4.28 -2.64 -4.21 -1.19 -1.9 -4.71 - - - -4.15 - -4.71 -2.05 -3.77 -4.82
1.32 -5.1 3.69 3.36 3.09 0.52 3.23 - -1.29 -6.1 -0.74 -2.52 - - - - - - 0.72 -5.2 - - - -9.27 - - - - -2.7 - -7.2 - -6.59 - - - - -7.73 - - - - - - - - - -
2.7 0.01 2.35 1.87 1.59 -2.53 1.36 -7.3 -8.25 -5.98 -5.38 -5.57 -8.62 -0.43 -0.29 -2.18 -1.05 -1.12 -1.36 -0.1 -0.88 -0.11 1.23 -1.3 -2.73 -2.26 -7.04 1.24 -0.98 -3.31 -0.25 0.41 -1.17 -2.46 1.13 -2.18 -3.79 -0.67 -3.45 - -6.49 -2.92 -1.49 2.02 0.62 - - 1.14
1.8 -1.42 2.83 2.75 2.26 -0.72 2.52 -2.82 -2.59 -0.16 -1.36 -7.76 2.67 -1.99 0.06 -1.9 -0.75 -0.42 0.09 -2.97 -4.53 -6.23 -8.85 -2.78 -6.22 -4.07 -2.27 -5.39 -1.28 -8.05 -1.94 -1.53 -3.11 -2.03 -5.37 - -6.06 -5.57 -1.88 -7.2 - 1.35 0.27 -3.07 -0.55 - - -1.57
AT3G27730 (RCK)
3.54 0.88 2.48 0.74 1.0 -0.08 0.64 -2.73 -2.91 -5.1 -7.01 -2.86 -3.36 -0.93 -2.57 -2.04 -6.04 -7.42 -2.72 0.78 -3.67 0.15 1.34 -1.3 -2.13 -1.97 -5.96 1.23 0.28 -2.81 0.04 -1.45 -1.87 -1.63 0.89 -0.57 -4.69 -0.35 -5.17 -4.92 - -2.06 -1.94 1.54 0.12 - -8.92 0.23
5.35 -0.39 -1.98 - 0.15 -0.46 - - -3.02 -4.17 - - - - - - - - -4.26 -4.51 -0.13 - - -2.21 - -3.75 - - -2.99 -3.45 -5.09 -3.01 -4.71 -4.41 -3.41 - - 0.37 - - -1.23 - -2.59 -1.98 - - - -3.78
2.92 -0.13 2.37 1.06 2.6 1.03 1.54 - - -5.95 - - -5.46 -1.28 -2.53 -2.47 -2.48 -3.92 -1.13 -0.62 -0.8 -1.31 -0.89 -3.05 -0.53 -4.72 - 1.66 -3.08 0.72 -0.52 0.58 -1.17 -0.96 -0.63 - -0.69 -1.16 -2.94 -2.09 - -2.6 -0.29 1.24 -0.93 - - 1.43
3.02 0.06 1.7 1.23 2.54 -0.99 0.04 -2.72 - -2.61 - -3.6 0.37 -0.41 -0.11 -0.83 -1.35 -3.64 -1.84 -0.01 0.51 -0.18 -0.54 -1.22 1.27 -0.57 0.41 1.11 -0.06 1.75 -1.66 -1.87 -0.72 -0.95 -1.86 -1.59 -3.35 -1.2 -0.37 -2.06 - -0.6 -0.1 -2.51 -3.09 - - -3.23
2.53 -0.38 2.48 2.89 2.1 1.41 2.74 -2.18 -2.11 -3.41 -2.52 0.41 -2.38 -0.3 -1.34 -2.09 -2.34 -2.16 -0.87 -1.12 -0.93 -2.86 -3.07 -1.02 -3.6 -1.66 -1.21 -3.53 1.42 -3.64 -0.97 -1.1 -3.32 -3.58 -2.71 -2.35 1.07 -0.85 -1.07 -5.38 - -6.11 -5.02 - -7.02 - -5.76 -6.17
1.7 0.49 2.13 1.93 1.08 -1.16 1.63 -2.22 -1.7 -3.12 -2.1 1.1 -1.56 -0.28 0.48 -0.76 -0.51 -1.02 -0.42 0.42 -0.27 -1.09 -0.57 -0.62 -2.22 -0.63 -0.11 0.08 0.75 -1.79 0.0 -1.16 -0.6 -0.67 -0.02 -0.32 0.39 -0.19 -0.66 -2.98 -2.11 -0.88 -0.96 0.79 -0.42 -6.72 -0.38 -0.74
3.87 1.75 -1.43 -0.55 -1.78 -1.87 -1.44 -3.54 -4.71 -5.7 -4.11 -4.47 -2.72 1.25 -0.25 -1.11 -1.58 -0.86 -1.43 1.13 0.14 -1.41 -1.32 -0.94 -0.89 -0.51 -0.6 -0.3 0.23 -2.9 0.19 -2.54 -1.29 -0.79 -1.22 0.68 -0.75 0.25 1.43 0.62 0.39 -0.02 -2.13 -0.28 -2.61 - - -2.09
3.25 0.38 0.56 0.06 0.62 -1.19 0.06 - - -6.13 - - - 0.12 0.21 -0.03 -0.5 -0.37 -1.74 0.89 0.58 0.51 1.24 -0.63 -0.61 -0.8 -2.58 1.44 -0.74 -0.84 0.43 0.81 -0.89 -0.62 0.69 -0.46 0.13 -0.39 -1.59 -3.81 - -3.79 -1.72 1.11 0.31 - - -0.12
AT4G14590 (emb2739)
2.97 0.95 1.45 0.89 0.84 -4.02 0.84 - - - -4.51 - - 0.02 -0.15 -0.81 -0.38 -0.66 -0.98 1.09 -0.57 -0.45 0.62 -0.87 -0.77 -1.01 -1.76 0.89 0.7 -0.47 0.83 0.18 -0.78 -0.47 0.86 -0.85 0.22 -0.25 -0.27 -3.52 -3.63 -0.3 -1.12 0.66 0.02 - - -0.12
3.07 1.21 1.49 2.31 1.59 -0.34 2.04 -1.05 -2.5 -4.64 -3.57 -0.8 -2.93 -0.86 -0.8 -2.77 -3.14 -2.82 -1.28 0.67 -3.12 -1.82 -0.14 -1.52 -4.88 -3.01 - 1.95 1.51 -6.62 0.91 -0.94 -1.7 -2.83 0.86 -2.12 - -1.3 -5.83 -3.05 - -3.83 -2.17 0.22 -1.38 - - -0.34
3.56 -1.94 2.01 1.6 1.47 -0.23 2.34 - -3.76 -3.15 - - - -1.35 - -1.21 - - -0.92 -2.95 -3.47 -3.31 -3.29 -0.89 -0.9 -1.0 2.89 -2.22 0.23 -3.57 -2.97 - -2.91 -4.16 -1.95 -1.35 1.51 -1.44 1.76 -3.35 - - - - - - -3.49 -
3.22 -5.48 3.46 2.22 3.19 2.28 2.09 -0.1 -2.15 -1.4 -2.98 -8.07 -0.74 -7.27 -3.23 - - - 0.14 -5.96 -3.49 - - -4.23 -7.88 -4.28 -4.28 - -2.37 -9.24 -4.65 -7.54 -8.19 -9.23 - - -1.08 -7.03 -1.89 - -6.04 - - - - - - -
2.47 0.46 1.72 2.37 1.62 0.88 2.2 -1.97 -2.79 -5.81 -2.66 -2.47 -4.81 -0.14 -0.62 -0.44 -1.57 -1.17 -1.49 0.46 -0.25 0.33 0.83 -0.92 -1.99 -1.59 -3.94 0.88 -0.51 -2.14 0.48 0.13 -1.56 -1.65 0.69 -1.56 -1.49 -0.82 -2.42 -4.49 - -2.11 -2.16 0.62 -0.65 - - -0.28
4.46 -3.72 1.85 -2.47 2.1 2.46 -3.43 1.9 - -1.88 - -8.34 1.81 - -2.55 -5.64 -6.29 - -1.12 -3.7 - - - -1.4 - -1.99 -6.34 -2.63 1.0 -4.7 -4.43 -6.82 -6.63 -1.83 -10.09 -3.4 -6.1 -3.48 -5.65 -1.16 - -4.21 -2.96 - -5.12 - - -7.22
5.39 -4.83 - - - 0.94 - - - - - - - - - - - - - - - - - - - - - - -1.93 - - -2.22 -0.93 -1.33 -4.96 - - -4.15 -2.85 - -1.13 - - - 0.96 - - -
AT5G27130 (AGL39)
3.61 -1.17 1.18 1.56 1.64 -2.72 -1.2 0.01 - -1.58 -2.33 1.46 -1.94 -1.25 - -3.25 - - 0.63 -2.78 - - - -7.75 - -3.32 - - 0.37 -4.01 -4.76 -1.33 -2.07 -2.38 -3.22 -0.65 3.2 -0.33 -2.25 - - 1.57 -0.17 -1.57 1.03 - - -2.24
5.53 -3.41 - - - - - - - - - - - -4.8 - - - - - - - - - -1.68 - -3.33 - -2.43 - - -3.72 -4.21 - -4.78 - - - -6.35 - - - - - -0.87 - - - -1.63
4.17 - - 3.94 1.05 0.66 0.78 - - - - 2.19 - - - - - - - - - - - - - - - 1.26 -0.2 - - - - - -2.53 - - -1.78 - - - - - - - - - 0.05
3.2 1.41 -0.6 -1.8 -1.37 -1.4 -0.97 0.25 -3.73 -1.19 -3.32 -4.59 -1.43 -0.07 0.52 -1.66 -3.1 -2.48 -1.34 1.35 -4.69 0.99 1.97 -0.7 -6.84 -1.63 - 1.04 0.58 -6.78 0.35 -1.16 -1.09 -1.1 1.45 0.28 -4.27 0.25 -4.67 -1.19 -1.96 -1.93 -1.63 1.74 0.47 - -12.94 0.52
3.94 0.04 -0.48 -0.04 -0.16 0.01 -0.08 -3.05 -3.04 -5.59 -5.24 -6.44 -5.73 -0.97 -0.23 -1.36 -0.76 -1.28 -2.09 0.14 -0.88 -1.4 -0.68 -0.94 -2.83 -1.11 -1.59 -0.65 0.32 -2.22 0.03 -1.91 -1.88 -1.6 -0.61 -0.99 -0.95 -1.2 -1.5 -2.78 -1.6 -1.6 -1.74 -1.01 -2.32 2.86 1.98 -2.07
4.57 -0.35 1.86 2.29 1.98 0.13 2.52 -2.78 -2.73 -5.09 -4.02 - -7.23 -3.06 -1.88 -3.13 -3.93 -6.99 -2.82 -1.5 -4.89 -5.71 -3.89 -2.55 -6.8 -2.75 -5.41 -2.17 -1.14 -4.03 -1.61 -3.91 -4.21 -5.45 -4.92 -5.54 -1.7 -2.18 -2.39 - - -5.54 -6.47 -3.28 -4.13 - -9.49 -5.3

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.