Heatmap: Cluster_12 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Egg cell
Ovule
Uninucleate microspore (Col-0)
Uninucleate microspore (Ler-0)
Pollen (bicellular, Col-0)
Pollen (late bicellular, Col-0)
Pollen (bicellular, Ler-0)
Pollen (tricellular, Col-0)
Pollen (tricellular, Ler-0)
Pollen (mature, Col-0)
Pollen (mature, Ler-0)
Sperm
Pollen tube (Col-0)
Flower (receptacles)
Flower (floral buds)
Flower (sepals)
Flower (petals)
Flower (stamen filaments)
Flower (anthers)
Flower (carpels)
Flower (stigmatic tissue)
Pedicel
Axis of the inflorescence
Silique
Silique (senescent)
Pods of siliques
Pods of siliques (senescent)
Embryo
Endosperm
Seed
Seed (young)
Seed (germinating)
Seedling
Seedling (etiolated)
Meristem
Stem (internode)
Stem (internode, senescent)
Stems
Leaf (rosette)
Epidermis cells
Mature guard cells
Root (differentiation zone)
Root (elongation zone)
Root (meristematic zone)
Root (apex)
Root (stele)
Root (QC cells)
Root (tip)
- -3.7 -2.54 -5.14 -5.6 - - - - - - - -3.83 -0.07 1.58 0.95 - -2.96 -2.11 -1.68 -2.1 -1.57 -2.78 -1.34 -5.4 -0.83 -3.13 - - -5.88 -5.26 1.94 2.79 -0.26 3.96 3.08 -1.16 0.26 0.83 - - - - - -2.23 - - -
AT1G16410 (BUS1)
- -7.82 - -9.68 - - -8.61 -11.78 - -11.89 - -8.96 - -4.58 -2.29 -5.08 -9.85 -11.7 -7.13 -7.39 -4.15 -1.58 -7.34 -3.15 -0.63 -1.42 3.51 - -5.39 -5.98 -8.79 -7.52 1.0 - 2.18 3.04 3.69 2.6 -0.09 - - -10.18 -11.15 - -4.52 - - -
-2.31 0.16 -3.67 -4.17 -3.81 -7.66 -4.43 -10.43 - -10.44 -9.35 - - -0.09 -0.44 0.04 0.1 -0.52 -1.67 0.73 0.17 0.58 -0.0 0.62 -1.12 0.45 2.74 0.55 -0.39 -5.5 0.67 -1.55 -0.26 -1.7 0.94 2.42 2.6 1.42 -1.25 -3.04 -8.14 -0.59 -3.26 -2.1 1.46 - -1.24 -2.09
AT1G31230 (AK-HSDH)
-0.94 0.35 0.83 0.74 0.34 -0.49 0.4 -5.79 -4.95 -6.87 -5.38 -6.34 -8.14 0.03 0.58 0.14 -0.88 -0.83 -1.16 0.57 -0.46 0.62 0.79 -0.15 -1.96 0.14 -0.43 1.38 -0.34 -3.13 0.32 0.66 0.58 -0.29 0.48 0.67 1.44 0.81 -0.65 -2.73 -5.36 -0.66 0.09 0.96 1.41 0.06 -5.55 0.53
AT1G55010 (PDF1.5)
- -8.1 - - - -5.18 - - - - - - - -6.05 -3.73 - - - -5.54 -5.15 0.11 - - -7.01 - -5.9 -2.86 - -5.22 -4.98 - -1.84 -1.21 -2.94 5.44 - - 1.19 -5.15 - - - -4.71 - -4.7 - - -
AT1G56430 (NAS4)
- -3.94 -4.01 - -4.5 -4.67 -7.73 - - - - - - -5.76 -4.71 -5.11 - -4.23 -5.56 -5.52 -5.91 -3.41 -2.98 -6.01 -5.7 -4.29 -3.85 -4.45 -4.42 -4.54 - -0.07 1.61 0.15 4.8 1.13 0.99 1.84 -0.3 -3.38 - 2.13 -2.64 - -0.05 - - -
AT1G62560 (FMO GS-OX3)
- -4.25 - - - - -8.31 - - -10.69 - -9.44 - -2.27 -1.18 -5.15 -9.55 -7.69 -7.26 -5.17 -4.25 0.59 -2.32 -3.16 -1.14 -1.35 2.9 -5.77 -2.93 -5.75 -8.3 -3.55 0.51 -6.63 1.51 3.36 3.96 2.47 -0.21 -4.03 - -5.35 -6.68 - -2.59 - - -6.42
AT1G65860 (FMO GS-OX1)
-3.85 -5.06 - - - - - - - -8.62 - - - -3.47 -1.72 -3.32 -3.15 -2.34 -5.91 -5.49 -4.54 -0.54 -6.25 -3.6 -0.16 -2.29 3.64 -4.26 -5.71 -6.36 -10.7 -6.13 0.53 -6.11 1.78 3.53 3.11 2.45 -0.29 -6.66 -0.73 -2.58 -7.19 - -1.15 - -12.47 -9.42
- -5.94 -3.77 -4.45 -2.43 -3.26 -4.8 - - - - -6.89 - -3.23 -3.37 -4.02 - - -6.38 -3.44 - -3.29 -4.37 -4.03 -3.21 -1.77 - - - -4.2 -3.41 -2.93 4.01 1.34 2.95 1.85 1.53 1.41 -1.19 -2.82 - -0.63 -2.35 -0.07 2.83 - - 0.27
AT1G74090 (SOT18)
-2.72 -0.51 -2.42 -3.05 -2.15 -1.2 -2.45 -4.2 -4.2 -8.81 -7.62 - - -0.05 -0.22 0.37 -1.24 -0.19 -2.54 -1.19 -1.66 0.38 -1.75 0.18 -1.27 0.76 2.87 -2.69 -2.28 -6.19 -0.91 -1.94 0.38 -0.85 1.25 1.95 1.92 1.63 0.39 - - 1.19 -0.68 -3.03 2.3 0.64 0.29 -2.32
AT1G78370 (GSTU20)
-4.2 -0.93 -12.02 -8.98 -12.43 - -8.33 - -11.93 -13.41 -11.87 - - -1.95 0.01 -1.98 -1.66 -1.59 -1.76 -0.56 -2.8 0.44 0.63 -0.72 -3.42 -0.38 0.26 1.96 -2.32 -6.79 -0.68 -1.15 1.26 -1.71 3.2 3.35 2.08 2.47 -0.28 -6.02 - -2.45 -5.17 -7.34 -2.06 - -2.14 -4.54
AT2G14580 (PRB1)
- -7.86 - - - - - - - - - - -4.31 -6.3 -0.95 - - -4.0 2.03 -5.46 - - - - - - - - - -6.35 - - 2.41 -5.37 4.7 - - 3.39 -8.5 0.44 - - - - -4.52 - - -
-3.98 1.19 - -2.42 - - -4.39 - - - - - -5.18 3.11 2.26 1.42 1.47 -0.21 -1.54 -0.05 -1.23 1.01 -0.14 0.85 - 1.39 -0.91 - -4.7 - -2.15 -0.73 1.92 -0.99 2.78 -1.89 -0.25 -0.13 0.97 - - - - - -4.39 - - -
-2.15 0.23 -5.87 -6.81 -7.04 -7.3 -6.32 -6.01 -4.55 -6.39 -4.62 -8.78 -2.57 -0.17 1.22 1.07 -2.28 -1.38 -2.57 0.28 -0.65 1.94 1.13 -0.02 -2.37 0.91 2.0 -8.69 -5.07 -6.41 -2.79 -1.19 1.38 -1.83 1.68 2.39 2.27 1.69 0.25 0.08 -9.63 -0.13 -7.41 -9.13 1.08 -8.38 - -8.56
AT2G43100 (IPMI2)
-9.37 -6.76 -5.83 -5.56 -6.21 -8.57 -7.12 - - - - - - -2.8 -2.65 -4.25 -8.28 -8.02 -6.35 -6.29 -5.93 -0.94 -5.47 -1.58 -0.5 -0.15 3.26 -6.44 -6.56 -3.19 -7.38 -3.57 0.6 -3.54 2.94 2.76 2.62 2.01 -0.08 -8.95 - -0.76 -7.47 -6.89 1.77 - 1.99 -7.07
AT3G03190 (GSTF11)
-6.76 -4.92 - -6.5 - - - - - - - - - -2.9 -1.07 -4.47 -7.69 - -8.1 -5.81 -6.62 0.01 -4.31 -3.15 -1.54 -1.69 2.47 -6.38 -9.75 -5.81 -7.89 -4.22 0.62 -5.97 2.23 3.63 3.31 2.39 -1.18 - - 0.57 -6.42 - 2.02 - - -
- -2.58 - - - - - - - - - - -2.01 2.99 1.69 -2.98 -0.77 0.21 -1.76 -1.08 - 1.56 0.48 -7.06 -6.04 -7.72 -5.51 - - - -3.86 -2.42 -0.15 -4.19 4.11 1.8 -1.5 2.8 -3.87 -3.59 - - - - - - - -
- -1.77 - - - - - - - - - -4.1 - 2.02 0.55 -2.69 - -3.57 - 0.02 -3.24 1.06 0.09 -4.23 - -1.61 - - -4.45 -4.85 - - 1.15 -2.59 3.85 2.73 2.27 0.49 -0.72 - - -1.11 - - 2.68 - - -
AT3G49680 (BCAT3)
-0.35 0.26 1.45 1.61 0.7 -1.11 1.49 -5.91 -6.27 -6.34 -4.87 -8.17 -8.19 -0.34 0.65 -0.07 -0.79 -1.08 -1.6 0.2 -0.75 0.66 0.43 -0.66 -2.69 -0.72 0.17 1.09 -0.05 -3.75 -0.16 0.06 0.59 -0.67 0.71 1.01 0.46 0.33 -1.16 -0.27 -0.76 -0.44 -0.73 1.04 0.27 -0.08 -0.27 0.66
-7.41 -1.97 -7.51 -8.54 -9.57 - -7.25 - -10.44 -11.45 -10.2 - - -0.73 -0.02 0.49 -3.72 -3.07 -3.15 -1.61 -1.91 1.08 -1.9 0.33 -0.8 1.55 3.22 - -6.36 -6.29 -3.89 -3.12 0.56 -2.24 1.5 2.57 2.81 1.74 -0.15 -4.45 - 0.69 -9.04 -7.43 1.92 - - -11.24
AT3G58990 (IPMI1)
-9.67 -6.07 -7.2 -7.83 -6.29 - -6.75 - - - -9.43 - - -4.31 -2.03 -2.39 -7.19 -8.26 -6.11 -6.87 -4.95 -0.49 -5.9 -1.86 -0.35 -0.35 3.56 - -6.01 -5.38 -7.59 -4.08 0.62 -2.51 2.23 2.59 3.0 2.02 0.17 - - 0.77 -8.31 -8.72 2.47 - -3.94 -10.4
AT4G12030 (BAT5)
-10.24 -4.37 -9.27 -5.35 - - -6.93 - - - - - - -2.54 -1.89 -2.35 -3.79 -4.08 -4.53 -4.77 -3.78 0.16 -3.73 -2.42 -1.48 -0.77 2.95 - -6.83 -6.38 -6.96 -4.55 0.29 -3.13 1.57 3.42 3.55 2.53 -0.06 -5.44 - -0.07 -9.01 -8.4 1.3 - - -
AT4G13770 (REF2)
-10.65 -5.7 -7.12 -8.37 -9.64 -10.51 - -10.09 -12.09 -10.78 - - - -2.15 -1.07 -2.57 -9.06 -9.77 -5.6 -6.26 -5.55 0.9 -2.41 -2.52 -0.62 -0.92 3.38 - -7.97 -6.74 -7.91 -5.65 0.54 -5.85 1.51 2.91 3.57 2.51 0.29 -9.52 - -2.69 - - 1.22 - - -12.81
AT4G14040 (SBP2)
-7.3 -3.53 -9.45 -3.76 -7.82 - -3.17 - -7.55 - -9.33 - - -1.32 -1.63 0.54 -2.95 -4.38 -1.96 -2.31 -4.44 -0.24 -2.97 -2.14 -1.01 -1.08 1.36 -6.64 -2.93 -1.83 -4.02 -0.77 1.76 0.44 2.44 3.46 2.86 2.82 1.43 -2.6 -3.75 -4.43 -2.71 -6.31 -1.62 -9.27 -9.56 -4.06
AT4G15320 (CSLB06)
-4.02 -2.75 - -3.58 -2.85 -1.27 -1.0 -5.11 - - -5.14 - - - - - - - -1.96 -1.04 3.35 - - -5.67 - -6.67 - - -4.91 -4.73 -5.98 -6.04 1.08 -2.84 4.8 -4.57 - 1.91 -8.35 - - -0.58 -0.45 - -1.89 - - -4.69
- -12.82 - - -8.22 - - - - -10.16 - - - -3.96 - -6.93 -6.47 -6.9 -7.28 -6.96 -8.22 - - -8.04 -9.16 -7.93 - -10.96 -6.54 -7.15 -11.45 -7.36 1.84 -2.06 5.24 -9.06 -8.04 2.43 - -0.17 -7.01 -5.43 - - -6.16 - - -
- -3.0 - - -1.04 -2.89 -1.77 - -4.02 -3.44 -2.74 - - -6.19 -5.91 -7.59 -6.8 -4.3 0.83 -1.96 -1.62 -3.5 -3.12 -5.58 -8.31 -5.76 - - - -6.73 -3.54 -0.29 1.43 2.95 4.77 -1.06 -7.46 2.2 -8.44 -2.44 - - - - -4.89 - - -
- -10.51 -6.09 - -7.59 - - - - -10.49 - -10.88 - -10.48 - -8.89 -4.66 -4.38 1.24 -6.85 -6.57 - - -8.28 -6.7 -5.9 - - -5.79 -7.56 -10.14 -7.44 2.16 -4.62 5.11 -6.17 -6.15 2.49 -12.4 -0.65 -4.21 - - - -5.35 - - -
- - -8.73 - -8.72 - -7.4 - - - - - -7.49 -9.31 - -6.46 -7.56 -3.43 1.59 -6.63 - - - -8.01 - -8.48 - - -7.75 -6.61 -10.7 -10.25 1.73 -3.59 5.14 - - 2.5 - -1.28 - - - - - - - -
- -7.97 - - - - - -4.48 - - - - -7.02 -3.67 - -3.83 -5.69 -7.37 -4.89 -4.98 -4.87 - - -4.5 -4.02 -6.35 - -7.3 - -4.87 -7.46 -5.1 0.84 -2.51 5.31 - -3.18 2.38 - -1.86 -4.9 - - - -3.43 - - -
- - - - -4.42 -5.29 -6.34 -6.75 -5.18 - -6.47 - -4.83 - - - -5.91 - -6.26 -5.76 - - - -7.05 -5.29 -6.52 - - - - -6.49 -5.91 0.65 -2.4 5.35 -6.43 - 2.21 - -0.9 - - - - - - - -
-0.88 -5.33 -4.63 - -5.11 -4.04 -5.38 - - -6.36 - - -6.72 0.72 - - -5.16 -4.1 -6.79 -4.87 -6.15 - -5.95 -6.17 -4.79 -6.55 -3.83 -3.32 -2.96 -2.76 -5.9 -5.74 1.0 -1.85 5.11 -4.44 -4.41 2.34 -5.83 -2.96 0.24 -0.27 -0.99 -4.35 -3.61 - - -2.36
-6.37 -6.32 - -2.22 -3.3 - -4.57 -4.14 - - - - - -5.09 - -4.2 -5.41 -4.67 -5.24 -5.76 -5.34 - - -5.11 -4.03 -5.29 - - -4.32 -6.95 - -7.21 1.22 -1.39 5.35 -5.2 -4.38 1.75 -6.97 -4.01 - - - - -5.11 - - -
AT5G07690 (PMG2)
- -5.04 - - - - - - - - - -9.01 - -2.77 -0.83 -4.83 - -8.29 -8.46 -7.35 - -0.56 -1.93 -3.98 -5.89 -4.87 -1.57 - -6.92 -6.79 -8.63 -7.84 2.19 - 1.95 3.42 4.14 3.01 -0.25 -5.08 - - - - -5.75 - -8.5 -
AT5G07700 (MYB76)
- -7.74 - -3.98 - - - - - - -4.07 - - - - - - - - - - - -3.9 -4.6 -3.3 -6.11 1.09 - - -5.72 - -5.66 2.3 - 2.46 4.06 1.83 3.71 0.82 - - - - - - - - -
AT5G10180 (AST68)
-7.16 -1.7 - -8.27 - - -10.97 - -8.63 -12.34 -9.7 - -11.31 1.7 -1.41 -0.3 -1.16 -1.2 -5.81 -1.85 -5.66 0.05 -2.59 0.89 -0.37 0.22 3.67 -9.49 -0.96 -6.62 -1.92 -4.78 0.93 1.49 2.3 0.47 2.39 1.77 1.64 -5.5 - -0.96 -8.2 -8.94 -3.38 - - -11.61
AT5G14200 (IMD1)
-7.84 -6.47 -1.84 -3.88 -2.78 -4.82 -4.07 - -10.6 -10.52 - -10.08 - -2.75 -1.23 -3.39 -8.51 -5.2 -5.24 -6.27 -5.43 -0.59 -4.93 -1.95 -0.86 -0.67 3.13 -7.41 -5.18 -6.33 -7.19 -3.26 1.32 -2.22 1.83 3.24 2.6 2.07 0.1 -6.05 - 1.01 -6.62 -4.72 2.62 - -1.59 -6.16
AT5G23010 (IMS3)
-13.12 -7.69 -9.72 -9.55 -10.6 - -9.91 - -11.5 -11.25 -12.18 -9.96 - -3.87 -2.48 -4.33 -7.68 -8.98 -6.23 -7.11 -5.36 -1.07 -6.56 -3.29 -0.44 -1.32 3.57 -12.02 -6.42 -6.61 -8.61 -5.77 0.71 -5.73 1.38 2.86 3.97 2.13 0.29 -7.5 -8.01 -3.82 -9.74 - 0.14 -9.12 - -13.27
0.01 -6.16 0.77 -1.3 -0.79 - -2.26 - - - - - -3.21 4.22 - -5.89 - -4.43 -0.07 -1.26 2.88 - - -4.17 - -6.07 - - -4.15 -7.77 -5.6 - -0.73 -4.61 3.84 - - 0.22 - -3.78 - -2.65 -5.88 - - - -8.0 -
- -7.16 - -3.03 -3.98 -4.13 -3.58 - - - - - - - -4.26 -6.34 - - -7.27 -3.84 -0.36 - - -1.64 - -3.65 - - 0.12 - -6.74 - 1.47 -2.55 5.24 - - 1.42 -7.51 -1.23 - - - - 0.63 - - -
-4.61 -7.19 -8.43 - -7.95 - - - - -9.87 - -7.23 - -5.24 - -6.91 -7.43 -7.69 -0.88 -5.9 -5.9 - - -7.34 -8.64 -6.69 -8.36 - -5.45 -6.08 -3.02 -2.09 0.79 1.11 4.96 - -5.17 1.12 -5.38 - - 1.78 -0.88 -7.56 2.5 - - -4.39
- -1.12 - - - - - - - - - - - 2.76 -0.99 -0.57 -1.24 -1.5 -3.26 -1.48 -5.19 2.31 2.39 -2.42 -0.4 -1.76 3.08 - - -6.8 -3.06 -5.41 -0.24 -2.97 3.31 0.45 1.68 0.98 -0.59 - - - - - -2.97 - - -
- 1.3 - - - - - - - - - -4.78 -2.22 2.72 - - - - -5.14 -0.39 2.61 - - 0.53 - 0.15 - - -3.21 - -1.59 - 0.2 -5.29 4.64 - -2.54 1.3 - - - - - - - - - -
AT5G60780 (NRT2.3)
-8.09 -7.07 -2.88 -4.01 - - -4.54 - -4.37 - - -4.73 - -5.07 - -6.5 - - -2.17 -6.8 - - - -7.63 - -6.11 -4.04 -4.47 0.12 -6.33 -6.45 -5.04 2.0 -6.56 4.87 -4.58 -5.47 0.36 -4.68 -2.38 - - - - 3.42 - -0.84 -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.