Heatmap: Cluster_345 (HCCA cluster)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Root (elongation zone)
Root (meristematic zone)
Root (stele)
Root (tip)
Root
Leaf (3rd leaf of seedling)
Leaf (3rd leaf)
Leaf (apex)
Leaf (bundle sheath)
Leaf (mesophyll)
Leaf (Seedling)
Leaf
Internode
Stalks
Shoot
Shoot (apex)
Tassels (primordia)
Tassels
Anther
Pollen
Ear (immature)
Ear (inflorescence)
Ear (leaf)
Ear (primordia)
Ear
Silks
Kernels (germinating)
Kernels
Maternal transfer zone
Nucellus
Embryo
Endosperm (transfer layer)
Endosperm
Seeds
Coleoptyle (5 day)
Seedling
Whole Plant
Zm00001d004960 (GRMZM2G537291)
-0.33 1.45 0.23 0.45 0.31 -2.85 -2.5 -0.06 -0.94 -0.84 -0.98 -0.54 0.18 -0.16 -0.55 0.38 0.67 0.07 0.9 -7.52 0.15 -0.3 -0.52 0.82 0.06 0.04 0.04 0.77 -1.94 0.33 0.67 -1.95 0.43 0.16 0.27 -0.4 -0.68
Zm00001d005485 (GRMZM2G134955)
0.52 2.15 0.19 0.94 0.39 -2.5 -2.02 -0.07 -1.19 -1.32 -1.61 -1.15 1.11 -0.44 -0.96 0.24 0.45 -0.29 0.69 -5.88 -0.22 0.15 -1.44 0.81 0.16 -0.2 0.7 -0.14 -3.52 -0.68 0.03 -3.21 0.08 -0.5 1.06 -0.92 -0.86
Zm00001d007900 (GRMZM2G028834)
0.58 1.76 0.17 0.97 0.09 -2.0 -1.61 0.25 -0.91 -1.1 -1.46 -0.78 0.79 -0.62 -0.56 0.35 0.42 0.36 0.39 -4.22 0.48 0.27 -1.69 0.88 0.17 -0.46 0.4 -0.01 -0.97 0.32 0.15 -1.28 -0.56 -0.22 0.32 -0.89 -1.29
Zm00001d008242 (GRMZM2G120876)
-0.11 2.07 -0.32 0.95 0.44 -5.21 -5.02 0.51 -4.06 -4.3 -3.36 -1.98 1.33 -1.14 -1.48 0.53 1.51 -0.13 0.66 -6.94 0.65 0.36 -2.32 0.56 0.19 -2.42 0.83 0.73 -2.68 0.25 0.95 -3.2 0.21 -0.55 -0.83 -1.55 -1.74
Zm00001d008757 (GRMZM2G336815)
0.46 1.39 -0.14 1.08 0.18 -2.42 -1.87 -0.17 -1.4 -1.7 -2.08 -1.11 0.6 0.5 -0.45 0.02 0.8 -0.22 0.35 -5.55 -0.1 -0.06 -0.3 0.73 -0.08 -0.52 0.35 0.21 -1.23 0.68 0.27 -2.02 0.15 0.23 1.09 -0.69 -0.79
1.35 1.21 0.42 1.02 0.03 -1.4 -1.69 -0.6 -0.53 -0.75 -2.49 -0.69 0.92 -0.64 -0.42 0.07 0.04 0.52 1.17 -5.06 0.16 0.49 -1.73 -0.31 0.15 -0.01 0.65 0.69 -2.83 -0.43 0.4 -1.31 0.08 -0.65 -0.48 -0.32 -0.97
Zm00001d011100 (GRMZM2G098153)
0.37 1.14 0.13 0.12 0.13 -2.05 -1.13 -0.0 -0.68 -0.95 -0.97 -0.59 0.88 -0.78 -0.35 0.24 0.59 0.24 0.97 -2.45 0.05 0.16 -0.71 0.69 0.06 -0.04 0.71 0.54 -1.32 0.54 0.07 -1.15 -0.01 0.1 -0.07 -0.5 -1.2
Zm00001d011102 (GRMZM2G098212)
-0.62 0.93 0.43 0.29 0.19 -1.84 -1.71 -0.55 -1.39 -1.59 -2.19 -1.17 0.29 -0.74 -0.73 0.14 1.26 0.3 0.32 -6.29 0.23 0.04 -0.47 0.81 0.0 0.33 0.29 1.05 -0.92 0.44 0.48 -0.51 0.75 0.48 0.42 -0.66 -1.3
Zm00001d011855 (GRMZM2G109472)
-0.38 1.36 0.38 0.74 0.12 -2.38 -2.91 -0.71 -2.41 -2.83 -1.98 -1.37 0.27 0.16 -1.16 0.05 0.61 -0.27 1.05 -6.36 0.26 0.98 -1.34 0.71 -0.03 0.21 1.13 0.31 -1.87 1.09 0.73 -2.41 -0.16 -0.06 0.85 -1.14 -1.55
Zm00001d013076 (GRMZM2G007695)
1.26 1.74 -0.69 1.33 0.64 -3.11 -1.83 -0.55 -1.28 -1.5 -1.26 -0.67 1.95 -0.01 -0.04 0.22 0.48 -0.04 0.58 -5.22 0.05 -0.49 -1.62 0.51 -0.16 -1.35 0.55 0.31 -2.08 0.11 -0.21 -1.81 -0.44 -0.84 -1.41 -0.66 -0.92
Zm00001d014626 (GRMZM2G066555)
0.37 1.37 -0.08 0.61 0.33 -1.95 -1.19 -0.02 -1.05 -1.11 -1.15 -0.54 0.53 0.08 -0.47 0.52 0.86 -0.41 0.39 -7.01 0.39 -0.69 0.23 0.42 0.02 -1.29 0.55 0.49 -1.35 0.65 0.3 -0.2 0.2 0.5 -1.16 -0.37 -1.01
0.65 1.35 -0.06 0.84 0.33 -2.4 -2.19 -0.4 -2.18 -2.36 -1.96 -1.09 1.06 0.22 -0.69 0.1 0.68 1.0 0.77 -2.51 0.03 0.54 -1.05 0.64 0.11 -0.25 0.74 0.24 -1.05 0.54 -0.14 -1.94 -0.44 -0.04 -0.15 -0.79 -0.8
Zm00001d016358 (GRMZM2G029559)
0.49 1.64 -0.15 0.45 0.09 -2.37 -1.44 0.46 -1.04 -1.15 -0.93 -0.99 1.1 -1.21 -0.44 0.17 1.27 0.14 0.54 -7.05 -0.1 0.82 -0.85 0.75 0.58 -1.03 0.17 0.74 -1.8 -0.34 0.23 -1.94 -0.05 0.08 -0.79 -0.63 -1.43
Zm00001d017617 (GRMZM2G058432)
0.86 1.41 -0.26 -0.09 0.51 -3.39 -2.16 0.09 -1.28 -1.76 -1.45 -1.11 0.85 -0.37 -0.37 0.66 0.42 -0.27 -0.49 -4.8 1.16 -0.03 -2.35 0.21 0.69 -0.59 0.56 0.41 0.53 -0.57 0.62 -0.3 0.36 0.05 0.36 -1.37 -1.07
Zm00001d017927 (GRMZM2G075223)
0.35 1.32 0.08 0.45 0.07 -2.44 -1.43 0.01 -0.8 -1.2 -1.33 -0.53 1.09 -0.62 -0.49 0.45 0.56 -0.12 -0.05 -5.71 0.4 -0.13 -0.25 0.47 0.08 -0.24 0.74 0.63 -0.58 0.8 0.06 -0.9 0.04 0.08 0.07 -0.64 -0.98
Zm00001d018873 (GRMZM2G143330)
0.56 1.77 -0.13 0.43 0.18 -2.57 -1.7 -0.04 -0.63 -0.81 -1.73 -1.06 0.89 -0.36 -0.07 0.18 0.72 -0.26 0.48 -5.44 0.28 -0.42 -1.13 0.79 -0.28 -1.24 0.39 0.55 -1.26 0.04 0.53 0.03 0.37 0.2 0.11 -0.72 -1.19
Zm00001d020219 (GRMZM2G146670)
1.29 1.78 0.47 0.66 0.23 -1.7 -1.61 -0.26 -0.82 -1.19 -1.93 -1.2 0.92 -0.44 -0.34 0.21 0.64 0.29 1.24 -5.21 -0.21 0.26 -0.78 0.5 -0.0 -0.74 0.5 -0.14 -1.26 -0.35 0.36 -1.22 -0.63 -0.35 -0.36 -0.69 -1.4
Zm00001d021815 (GRMZM2G107654)
0.46 1.4 0.14 0.33 0.01 -2.86 -2.31 0.03 -1.2 -1.16 -1.26 -1.2 1.13 0.23 -0.54 0.39 0.84 -0.14 0.54 -5.71 0.3 -0.01 -1.17 0.66 -0.34 -0.22 0.49 1.02 -4.79 0.27 0.22 -2.93 0.42 0.28 0.48 -0.66 -0.87
Zm00001d024624 (GRMZM2G134756)
0.14 1.38 0.08 0.61 0.17 -1.69 -1.53 0.23 -1.02 -0.93 -0.79 -0.8 0.39 -0.68 -0.14 0.21 1.06 0.11 0.29 -2.94 0.57 -0.56 -0.63 0.85 -0.51 -0.82 0.45 0.66 -0.56 0.18 0.36 -0.62 0.43 0.04 -0.36 -0.56 -0.55
Zm00001d027922 (GRMZM2G115182)
0.19 1.61 -0.04 0.75 0.11 -3.22 -1.85 0.14 -1.66 -1.6 -1.52 -0.85 0.65 -0.18 -1.05 0.35 1.03 -0.06 0.37 -3.52 0.44 -0.43 -1.07 0.28 0.21 -0.63 0.72 0.5 -0.56 1.04 0.44 -0.52 0.11 0.7 -1.47 -1.1 -1.04
Zm00001d028113 (GRMZM2G015067)
0.7 1.59 0.25 0.6 0.68 -1.53 -1.87 -0.08 -1.57 -1.68 -1.03 -0.65 0.9 0.16 -0.68 0.57 0.89 -0.17 -0.02 -5.14 0.52 0.23 -0.86 0.29 0.04 -0.38 1.02 -0.04 -3.7 0.49 0.47 -1.6 -0.44 -0.22 -0.88 -0.54 -0.58
Zm00001d028485 (GRMZM2G174236)
0.17 1.75 0.58 1.0 0.25 -2.85 -2.92 -0.24 -1.82 -2.21 -2.22 -1.34 0.56 -0.89 -0.74 0.19 1.07 0.41 1.51 -7.12 0.06 -0.71 -1.94 0.52 -0.17 -0.17 0.87 0.06 -2.13 0.32 0.79 -2.66 -0.14 -0.4 0.67 -0.82 -1.47
Zm00001d028971 (GRMZM2G174696)
0.78 1.79 0.42 0.77 0.38 -2.23 -1.86 -0.16 -1.59 -1.66 -1.41 -1.33 0.66 -0.59 -0.8 0.51 0.86 0.46 1.69 -2.41 -0.12 -0.63 -1.6 0.31 -0.3 -0.0 0.74 0.47 -2.5 -0.27 -0.28 -0.94 -0.23 -0.49 -0.39 -0.6 -1.0
Zm00001d032163 (GRMZM2G124281)
-0.21 1.04 -1.02 0.69 -0.26 -6.14 -6.42 -0.31 -3.68 -3.97 -4.53 -1.42 1.57 0.4 -0.81 0.21 0.87 0.3 1.23 -6.47 0.55 -0.11 -0.99 1.12 -0.16 -1.23 -0.18 0.17 0.81 1.08 0.6 0.61 -1.02 -0.71 0.01 -1.19 -1.19
Zm00001d032435 (GRMZM2G067638)
1.34 1.33 0.33 0.85 -0.07 -4.01 -3.37 -0.2 -1.34 -1.54 -7.09 -2.07 0.98 0.06 -0.0 0.59 0.86 0.94 1.64 -5.47 -0.04 0.5 -9.09 0.45 0.02 -0.76 0.18 -0.21 -0.74 0.63 -0.48 -2.11 -1.87 -0.86 0.1 -0.33 -1.4
Zm00001d033128 (GRMZM2G027451)
1.09 1.23 -0.1 0.85 0.39 -2.51 -1.86 0.28 -0.51 -0.75 -1.11 -0.3 1.03 -0.06 -0.21 0.26 0.82 -0.16 0.2 -6.27 0.55 0.78 -1.54 0.35 0.36 -0.38 0.76 0.1 -0.61 -0.43 -0.39 -1.81 -0.26 -0.81 -0.87 -0.55 -0.61
Zm00001d034440 (GRMZM2G068952)
0.86 1.06 -0.58 1.49 0.34 -3.89 -3.78 -0.09 -1.48 -1.65 -2.07 -1.01 2.05 0.35 -0.34 0.2 0.72 0.08 0.04 -3.84 0.74 0.15 -2.53 0.87 0.32 -0.68 0.49 0.15 -1.76 0.26 -0.35 -3.2 -0.14 -0.56 -0.77 -0.93 -1.12
Zm00001d034855 (GRMZM2G023242)
0.73 1.25 0.1 0.26 0.39 -2.72 -2.21 -0.34 -0.87 -1.2 -1.64 -1.01 1.19 -0.17 -0.19 0.34 0.43 -0.31 0.31 -5.24 0.51 0.63 -1.72 0.07 0.74 -0.6 0.61 0.69 -0.98 0.48 0.19 -1.08 0.5 0.26 -0.45 -0.73 -1.25
Zm00001d034880 (GRMZM2G123527)
-0.17 0.72 -0.08 0.48 -0.1 -1.87 -1.68 -0.11 -1.5 -1.7 -2.09 -0.72 1.11 0.21 -0.72 0.25 0.51 0.08 0.95 -5.3 0.25 1.3 -1.69 0.02 0.44 -0.57 0.47 0.57 0.21 1.08 0.21 -0.18 0.02 0.16 -1.97 -0.86 -1.02
Zm00001d035752 (GRMZM2G025214)
0.44 1.23 0.03 0.07 0.27 -1.83 -1.4 0.09 -0.67 -0.79 -1.59 -0.77 1.03 -0.3 -0.01 0.26 0.81 0.09 0.59 -2.69 0.32 0.35 -0.84 0.7 -0.0 -0.35 0.73 0.53 -1.26 -0.07 -0.06 -1.21 0.28 -0.38 0.15 -0.6 -0.87
Zm00001d037873 (GRMZM2G154218)
1.02 1.17 0.26 0.44 0.46 -2.6 -1.83 -0.56 -0.86 -1.02 -1.25 -0.67 1.22 0.17 -0.26 0.22 0.41 -0.27 0.09 -3.95 0.57 1.01 -1.13 0.51 0.49 -0.38 0.7 0.38 -2.73 -1.15 0.25 -4.73 -0.16 -0.27 0.48 -0.71 -0.34
Zm00001d039305 (GRMZM2G153181)
0.68 1.66 0.28 0.92 0.22 -2.81 -1.69 -0.1 -0.77 -0.9 -1.69 -0.78 0.75 -0.58 -0.45 0.25 0.72 0.03 0.62 -3.98 -0.1 -0.7 -0.52 0.94 -0.17 -0.62 0.59 0.74 -2.66 0.81 0.11 -1.93 0.1 -0.01 -0.45 -0.7 -1.0
Zm00001d039403 (GRMZM2G051262)
0.36 0.93 1.22 0.13 0.25 -0.57 -1.93 -0.38 -1.82 -1.63 -1.32 -0.9 -0.11 -0.04 -0.66 0.57 0.97 0.57 1.62 -6.7 0.65 0.98 -0.97 0.19 -0.14 -0.3 0.18 -0.34 -0.39 0.13 -0.47 -1.99 -0.96 -0.46 -0.02 -0.24 -0.61
0.65 2.1 0.21 1.26 0.66 -3.48 -2.47 -0.1 -1.92 -2.28 -1.94 -0.92 1.15 -0.15 -0.66 0.31 1.06 0.24 0.63 -3.92 0.32 0.56 -2.97 0.4 0.16 -1.49 1.21 -0.05 -2.42 -1.35 0.08 -3.2 -0.43 -1.06 -0.12 -1.14 -1.27
Zm00001d043317 (GRMZM2G016640)
-0.13 1.07 -0.57 0.65 -0.0 -4.47 -4.45 -0.18 -2.71 -3.31 -3.11 -1.45 1.32 0.4 -1.18 0.28 0.71 -0.36 1.57 -6.49 0.85 0.99 -4.02 0.85 -0.09 -1.04 0.43 0.59 0.78 1.24 -0.12 -0.85 -0.13 -0.63 -1.59 -1.13 -1.69
Zm00001d044446 (GRMZM2G137961)
0.88 1.64 0.13 0.31 0.5 -3.45 -3.14 -0.24 -1.61 -1.74 -1.08 -1.09 1.05 0.49 -0.79 0.38 0.75 -0.34 -0.71 -3.76 0.36 1.27 -1.98 0.24 0.34 0.35 0.81 -0.81 -2.03 -0.1 0.62 -2.13 -0.64 -0.1 0.72 -0.94 -1.09
Zm00001d046539 (GRMZM2G074037)
0.55 1.5 1.03 1.03 0.57 -1.23 -1.22 -0.12 -1.31 -1.36 -0.35 -0.5 0.15 -0.66 -0.79 0.15 1.29 0.53 1.08 -5.55 -0.29 0.3 -1.24 0.86 0.06 -0.23 0.45 -0.65 -3.41 -0.12 0.03 -4.57 -0.87 -0.96 -0.02 -0.45 -0.78
Zm00001d048252 (GRMZM2G100120)
0.18 1.36 0.19 0.62 0.32 -2.3 -2.24 -0.19 -0.71 -0.98 -1.14 -0.75 1.08 -0.05 -0.36 0.49 0.48 -0.23 0.55 -6.18 0.08 0.16 -0.91 -0.03 -0.05 -0.52 0.59 0.65 -0.13 0.32 -0.1 -1.04 0.36 0.49 -0.11 -0.44 -0.85
Zm00001d049133 (GRMZM2G181422)
-0.22 1.74 -0.45 0.67 0.09 -4.54 -3.85 -0.32 -3.42 -3.25 -2.1 -1.46 0.41 -0.73 -1.32 0.06 0.91 0.34 1.73 -7.02 0.54 -0.5 -3.03 0.31 0.34 -0.98 0.18 0.17 0.61 0.74 1.03 -0.2 -0.17 0.62 0.08 -1.58 -1.34
Zm00001d049929 (GRMZM2G014069)
-0.76 1.55 0.12 1.33 0.21 -4.04 -4.11 -0.29 -2.59 -3.08 -3.68 -2.02 0.49 -0.58 -0.73 0.5 0.92 -0.28 -0.28 -7.87 0.39 0.67 -3.74 0.47 0.07 0.09 1.0 0.94 -1.3 0.91 0.63 -0.66 0.7 0.29 -0.34 -0.66 -1.2
Zm00001d049945 (GRMZM2G181194)
0.58 2.17 0.67 -1.17 0.48 -3.78 -2.09 -0.06 -1.07 -1.02 -0.65 -0.79 0.86 0.08 -0.76 0.59 0.46 -0.85 0.1 -5.06 0.13 -0.07 -2.0 0.38 0.05 -0.13 1.07 0.16 -3.67 -2.14 0.7 -4.48 -0.27 0.37 1.21 -0.94 -1.19
Zm00001d049956 (GRMZM2G090241)
-0.54 1.72 -0.48 0.65 0.06 -2.66 -2.3 0.31 -0.58 -1.37 -0.35 -0.66 1.05 -1.14 -0.03 0.16 1.09 -0.21 0.52 -6.6 0.36 0.21 -1.13 0.61 0.37 -0.58 0.81 0.65 -2.1 0.13 0.44 -1.88 0.15 -0.12 -0.24 -0.43 -1.9
Zm00001d050496 (GRMZM2G070649)
0.86 1.93 0.02 1.34 0.34 -2.66 -1.61 -0.44 -1.33 -1.14 -0.36 -0.56 0.95 -1.05 -0.33 -0.08 0.74 0.17 0.36 -4.08 -0.6 -0.14 -2.18 0.49 0.08 -0.17 0.75 0.34 -0.96 0.51 0.04 -4.27 -0.36 -0.09 -0.71 -0.39 -0.91
Zm00001d053636 (GRMZM2G051848)
0.21 1.75 -0.5 0.06 0.27 -3.27 -2.57 0.43 -1.06 -1.26 -1.54 -1.24 -0.05 -0.89 -0.29 0.02 0.63 -0.24 0.14 -7.0 0.76 0.02 -1.01 0.93 -0.02 -0.48 0.47 0.87 -0.6 -0.63 0.82 -1.68 0.29 0.17 0.93 -0.8 0.23

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.