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Heatmap: Cluster_331 (HCCA)

View as: (view zlog-transformed or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Showing raw values)

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Gene
Egg cell
Ovary
Ovule
Microspore
Bicellular microspore
Pollen (mature)
Pollen tube
Sperm cell
Pollen tube
Tassels (primordia)
Tassels (anther)
Tassels
Silk
Ear
Ear (immature)
Ear (inflorescence)
Ear (primordia)
Zygote (12 HAP)
Zygote (24 HAP)
Daughter cell (apical)
Daughter cell (basal)
Embryo
Nucellus
Endopserm
Kernel
Kernel (germinating)
Seeds
Embryo Sac
Pericarp and aleurone
Coleoptile (5 day)
Seedling
Internode
Sheath
Shoot (apex)
Shoot
Whole plant
Vegetative Meristem & Surrounding Tissue
Meristem (SAM with Laser capture)
Apical meristem
Stem and meristem
Stems
Stem (Internode)
Leaf
Leaf (apex)
Leaf (bundle sheath)
Leaf (mesophyll)
Leaf (seedlings)
Leaf and kernel
Ear (leaf)
Root
Root (elongation zone)
Root (meristematic zone)
Root (stele)
whole crown root (20-30 mm)
Secondary root
Root, root hairs removed
Root (maturation zone)
0.74 0.21 0.64 0.32 0.55 0.3 0.14 1.65 0.14 0.68 0.89 0.27 0.4 0.58 0.2 0.46 0.29 4.95 3.11 1.53 2.13 2.05 0.96 0.36 0.55 0.39 0.53 1.84 0.32 0.0 0.56 0.33 0.0 0.67 0.21 0.7 0.39 0.78 0.37 0.83 0.4 0.32 0.81 0.35 0.19 0.37 0.7 0.22 0.66 1.46 0.11 0.42 1.63 2.36 0.21 0.69 0.3
Zm00001e020060_P001 (Zm00001e020060)
 2.23 0.9 3.24 2.24 1.05 0.77 0.34 1.05 0.34 1.03 1.99 0.67 0.42 0.57 0.58 0.35 0.71 5.92 3.02 4.15 1.94 2.26 2.1 1.18 1.3 5.91 0.87 6.2 0.78 0.72 0.77 0.51 0.4 0.87 0.52 1.6 0.28 1.16 1.05 0.31 0.74 0.69 1.05 0.36 0.24 0.62 0.62 0.5 1.42 2.36 2.31 2.02 1.34 7.36 0.46 2.64 1.51
Zm00001e038643_P001 (Zm00001e038643)
 0.13 0.13 0.36 2.07 0.0 0.03 0.25 0.38 0.25 0.36 0.56 0.14 1.03 0.52 0.16 0.0 0.95 1.18 0.09 0.55 0.17 0.23 0.0 0.79 0.4 5.21 0.16 0.0 0.0 0.74 0.39 0.05 0.0 0.16 0.05 0.36 0.0 0.0 0.32 0.0 0.09 0.0 0.26 0.95 0.15 0.07 0.18 0.39 0.0 2.25 2.79 1.84 0.23 1.91 0.52 4.9 1.21

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)