Heatmap: Cluster_150 (HCCA cluster)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Root (elongation zone)
Root (meristematic zone)
Root (stele)
Root (tip)
Root
Leaf (3rd leaf of seedling)
Leaf (3rd leaf)
Leaf (apex)
Leaf (bundle sheath)
Leaf (mesophyll)
Leaf (Seedling)
Leaf
Internode
Stalks
Shoot
Shoot (apex)
Tassels (primordia)
Tassels
Anther
Pollen
Ear (immature)
Ear (inflorescence)
Ear (leaf)
Ear (primordia)
Ear
Silks
Kernels (germinating)
Kernels
Maternal transfer zone
Nucellus
Embryo
Endosperm (transfer layer)
Endosperm
Seeds
Coleoptyle (5 day)
Seedling
Whole Plant
Zm00001d002214 (GRMZM2G389135)
- - - - - 4.17 4.16 - - - - -2.84 - - - -0.06 - - - - - - - - - - - - - - - - - - - - -
- - - -0.6 -1.24 -3.93 -3.39 -3.14 -0.34 0.24 1.15 1.43 -0.66 1.48 1.0 0.4 -0.38 -1.33 0.64 - -3.02 -4.04 - -6.25 -1.17 1.03 2.19 0.11 1.51 - 1.11 -0.92 -0.25 1.14 -0.2 -0.95 -0.03
Zm00001d004389 (GRMZM2G113844)
-8.9 - -2.8 0.46 -1.0 -4.25 -2.69 -4.38 -1.14 -0.32 0.95 0.83 0.68 0.7 0.29 0.42 0.34 -1.19 0.67 -6.09 -3.22 -3.31 - - -0.43 1.07 2.4 1.2 0.03 - 0.06 -2.23 -0.07 1.92 0.52 -1.03 0.14
Zm00001d004641 (GRMZM2G056828)
- - - 3.65 -1.31 3.93 -0.69 - - - - 0.84 - - -2.76 -1.19 - -2.06 - - -2.97 - - -1.7 0.17 - - -2.07 - - - - -3.77 - -2.68 -2.76 1.75
-3.16 0.16 - - -2.24 2.98 - -2.53 - - -0.92 0.33 - - - 1.22 - - 1.55 - - - - - - -0.63 - - - 0.87 - - -2.35 - -0.5 -4.22 4.09
- - - - 1.39 4.67 - - - - - - - - - -0.8 - - - - - - - - - - - - - - - - 3.07 - - - -
Zm00001d004773 (GRMZM2G414563)
- - - - -0.05 2.09 -1.61 1.0 -0.08 1.32 0.44 3.22 -0.48 -0.55 1.46 -1.95 -0.07 - -3.85 -3.86 -2.05 - - -2.82 - - - -5.33 - - 1.13 - -5.04 -4.02 -4.01 2.05 1.55
Zm00001d004886 (GRMZM2G135228)
- - -4.83 - -0.82 - - -0.91 -0.45 -0.01 1.02 3.5 -0.01 -1.01 1.8 0.21 -2.21 -1.26 1.64 - - - - -5.1 -1.47 -1.9 -3.17 -0.75 - -1.53 0.86 - -2.15 -0.68 -1.72 1.65 1.63
Zm00001d004990 (GRMZM2G107469)
- - -0.31 - 1.55 2.26 0.83 0.82 - - - -0.48 - 0.5 - 1.65 - - -0.18 - - - - - 3.77 - - 0.6 - - - - 0.19 - - 1.29 -
Zm00001d005706 (GRMZM2G101600)
- - - 1.96 -1.92 0.48 -2.24 -2.52 - - - -0.21 - 2.2 - 0.47 0.72 - 1.22 - 0.46 -0.16 - - -0.63 1.43 -2.14 -3.26 - 2.49 -2.65 1.94 -1.54 -2.66 1.59 -0.52 -1.04
Zm00001d006020 (GRMZM2G417583)
- - - 0.45 0.01 2.86 -0.1 - - - 1.54 1.23 - 2.88 -3.64 1.27 - - -1.75 1.13 -2.5 - - - - -0.67 - -3.48 - - -0.99 - -1.67 - - 2.06 1.55
Zm00001d007350 (GRMZM2G152969)
- - - - 2.61 4.63 - - - - - 0.33 - - - -1.78 - - 0.43 -2.84 - - - - - - - -1.2 - - - - -0.42 -0.54 - -2.09 0.08
-6.7 -3.74 -3.38 2.28 0.54 2.04 0.49 -5.07 - - 1.38 2.77 - -3.33 -4.45 0.39 -3.02 -3.33 0.14 -6.61 0.63 -1.36 - -2.98 -1.85 -1.85 1.08 -0.87 - -2.77 -4.0 - -2.02 -4.71 -6.19 0.17 2.55
- - -0.23 - - 3.62 3.41 - - - 2.03 0.77 - - -1.96 -1.4 - 1.23 -0.41 - - - - - -1.04 - - - - - -0.89 - 0.27 -1.0 - - -0.01
- - - - 0.69 3.98 - - - - - 1.1 - - - 1.25 - 2.71 - - 0.83 - - - 2.6 - - - - - - - - - -0.51 - -
Zm00001d010005 (GRMZM2G430646)
-4.15 -2.29 -5.06 -1.65 -1.77 -2.91 - -1.78 -3.47 -4.29 0.34 3.56 -0.7 0.94 0.96 -0.96 -1.43 -1.85 -0.91 - -0.57 -0.75 -1.85 -0.37 -1.92 -2.59 -1.11 -0.06 - 0.92 2.64 0.04 -3.73 -0.89 -3.22 0.57 -0.38
- - -0.66 - -0.95 3.5 4.03 - - - - -0.9 - - -1.9 -2.02 1.84 - -1.31 - - - - - -0.3 - - -3.13 - - - - - - 0.53 -0.37 -
- - -2.89 - -1.02 4.8 - - -1.9 - - -2.47 - - - 1.51 - - 1.99 - -4.63 - - - - - - -0.43 - - -2.86 - - -4.88 -2.27 -6.06 -2.86
Zm00001d012700 (GRMZM2G406155)
- - - 1.03 -0.64 -1.26 -1.22 -0.21 -1.92 -1.02 -4.27 0.04 -0.03 2.12 1.57 0.29 -3.11 -0.79 0.82 -2.77 2.79 1.41 - 0.98 0.52 -1.7 - -1.94 - -2.65 - - -1.48 -0.64 0.11 0.96 -0.15
-3.17 -2.32 -0.33 -1.31 1.13 -0.45 -1.09 -2.12 -1.57 -1.9 0.17 1.25 -1.67 1.42 -0.61 0.33 -0.13 -1.4 0.31 -9.86 -2.21 -0.87 -1.72 -0.22 -1.29 -1.16 0.48 -1.58 0.44 0.97 -1.28 0.12 -3.27 -2.48 -3.25 -1.25 3.35
Zm00001d013639 (GRMZM2G038801)
-1.94 -1.59 0.21 0.02 -0.84 1.17 0.62 0.78 0.42 0.93 -1.6 0.71 -1.27 1.25 -0.26 0.2 0.07 0.39 0.07 -0.52 -0.38 -0.17 0.69 -0.18 -0.75 -1.47 -1.28 0.28 - -1.77 0.35 0.18 -0.1 -0.06 0.31 -0.16 -0.69
Zm00001d013753 (GRMZM2G178351)
- - - - 2.36 - - - - - - 4.27 - - - 1.58 - - - -5.16 - - - - -3.03 - - -3.89 3.02 - - - -3.55 - -4.1 -1.08 -0.64
Zm00001d013756 (GRMZM2G045462)
- - - - - 5.15 - - - - - -0.25 - - - -0.83 - - - - - - - - - - - - - - - - - - - - -
Zm00001d014066 (GRMZM2G021973)
-7.24 - -2.94 -1.17 1.39 -0.52 -6.0 3.4 - -5.31 -0.12 2.01 -3.27 1.62 -0.93 0.43 -2.49 -4.62 0.88 - -1.87 -4.65 0.17 -3.96 -1.6 -3.16 - 0.09 - -2.26 -2.97 1.24 0.08 -3.03 -3.01 -1.02 1.56
Zm00001d014155 (GRMZM2G042061)
- - - - - - 3.87 - - - - 3.62 - - 3.31 -2.4 - - - - - - - - - - - - - - - - - - - - -
- - - - - 5.08 - - - - - -0.25 - - - -0.48 - - - - - - - - - - - - - - - - - - - 0.71 -
Zm00001d016545 (GRMZM2G024561)
-1.1 -1.64 0.52 -0.58 -1.01 -2.71 -2.92 -0.28 -0.54 -1.23 -3.12 0.76 0.42 0.63 -0.51 1.56 0.6 -0.36 1.8 -8.17 1.74 0.55 -4.71 1.12 0.19 -0.62 -1.42 -0.11 0.0 -0.83 -2.56 1.35 -0.41 -1.68 -1.09 -0.78 -0.43
- - -1.61 - -3.99 3.74 2.28 - - - - 1.39 - 0.73 1.27 0.14 1.4 -1.33 0.3 - -0.27 - - - - - - -0.6 - - -1.22 - - - 0.45 0.48 0.77
Zm00001d017710 (GRMZM2G405272)
- - - - - 5.14 - - - - - -1.92 - - - -3.59 - - - - - - - - - - - - - - - - 0.58 - - - -
-4.5 - -5.28 -0.97 -0.97 0.71 -5.69 - - - - -0.5 -3.05 3.51 -2.94 0.03 -3.49 -3.64 0.7 -4.19 1.85 - 0.43 -3.02 - -2.09 - -3.25 2.13 -0.49 1.19 - -1.88 -1.14 -4.59 0.09 2.13
- - - - -0.71 4.87 - - - - - 0.52 - - - -0.02 - - - - - - - - - - - - - - - - - - - 2.23 -
- - -0.68 - 0.26 -3.11 -2.24 - - - 0.32 2.96 - 0.67 - 0.33 - -1.66 -0.31 - -0.6 -0.0 - - -0.49 - 0.17 0.37 - - 3.55 - -2.23 - -0.61 0.79 1.47
- - - - - 5.05 - - - - - - - - - -0.76 - - - - - - - - - - - 1.74 - - - - - - - - -
- -1.73 - 1.2 0.61 0.13 0.96 -3.21 - - -1.31 -0.36 - - -2.16 0.94 0.5 - -0.17 - 0.04 2.18 - -2.86 -0.13 2.08 -0.9 0.43 - 1.09 0.34 - -2.54 - 2.0 0.79 1.06
Zm00001d021895 (GRMZM5G860235)
-4.21 - 1.32 3.56 1.43 0.87 0.52 0.32 -1.87 -3.02 0.67 1.31 - -0.22 -0.8 -1.24 - -3.95 -3.88 -5.96 -6.37 -3.94 - - -3.63 - -2.27 -5.16 1.16 - -0.56 -1.12 -3.56 -5.21 -1.31 1.24 1.21
- - - - -3.05 4.73 - - - - - -1.94 - - - -3.63 - - 0.13 - -1.03 - - - - - - - - - - - - - 3.01 -1.66 -
Zm00001d025142 (GRMZM2G066961)
- - - - -3.95 -6.89 -2.4 - -4.37 -4.92 -0.6 1.92 - -5.99 -1.52 -3.09 -7.37 -3.98 -1.76 -5.76 -4.6 - -5.65 -5.88 -1.22 - -3.82 -4.96 - - -4.24 0.09 - - -10.04 -0.36 4.85
- - - - - - - - - - - - - - - - - - - - - - - - 4.88 - - 2.9 - - - - - - - - -
- - - - - 4.25 - - - - - -2.01 - - - 0.71 - - - - 2.0 - - - - - - - - - - - 1.33 - 3.26 - -
Zm00001d027919 (GRMZM2G145308)
-9.68 -6.58 -6.67 -1.43 -0.31 -6.55 -7.23 -6.6 - -8.54 - -0.38 -3.33 3.81 -7.51 1.07 -2.4 -4.2 -5.26 -9.92 4.09 -1.98 -1.11 -6.26 -3.74 - -6.28 -6.57 - -3.49 -4.94 - -5.73 -6.42 -2.89 -1.7 -3.78
-5.73 -4.58 -2.84 1.15 -0.62 1.49 1.2 -0.6 -1.59 -1.63 0.09 0.83 -2.37 1.88 -0.56 -0.53 -0.99 -1.18 -0.57 -10.55 -0.16 -0.58 -1.85 0.16 -0.61 0.99 -0.87 -0.95 2.16 -0.05 -0.86 0.31 -0.91 -0.54 -1.5 -0.32 0.63
- - - - -0.4 - - - - 2.59 - 3.82 - - 1.02 1.92 - - 0.77 - - - - - - - - 2.33 - - - - 1.84 - - - -
Zm00001d029704 (GRMZM2G178079)
-0.59 -0.09 -6.82 2.54 0.61 -1.37 -0.84 -0.28 -2.32 -2.12 1.25 1.04 -2.29 -0.3 -1.37 -1.23 -3.42 -2.25 -0.53 -11.58 -1.73 -1.1 1.5 -4.39 -0.85 -1.77 0.9 -0.5 - 2.08 1.63 -2.85 -0.82 -0.68 -0.71 0.12 0.26
- - - - - 4.0 4.17 - - - - 0.47 - - 0.5 -2.56 - - - - - - - - - - - - - - - - - - - - -
-4.15 -3.69 -1.52 -2.03 -1.67 -4.75 -2.96 -2.16 -2.03 -3.7 -0.21 1.67 -2.79 3.09 -1.07 0.03 -0.64 -0.41 -0.12 - -0.54 -1.65 -2.38 1.31 -1.88 -3.67 -1.68 -0.56 2.48 1.59 0.53 1.29 -3.56 -1.59 -4.46 -0.96 -2.09
- - - - -2.34 - -3.03 - -2.11 -2.38 2.94 3.79 - -0.41 -0.07 -0.73 - - -0.02 -4.73 - - -0.07 -0.87 -0.6 -0.23 -0.91 0.84 - 0.72 1.36 - - -3.72 -0.85 0.27 -
Zm00001d031380 (GRMZM2G419430)
- - - - 0.1 - - - - - 1.19 1.96 - - - -0.0 -1.57 -0.86 0.73 0.05 - 1.68 4.28 - - - - - - - - - 0.76 - - -1.01 -1.4
-1.24 -0.92 0.1 0.15 -1.03 2.55 -0.5 0.08 1.06 1.11 - 0.64 -2.73 1.08 -0.78 -0.56 -1.61 0.82 -0.41 -2.08 0.23 -4.78 0.35 0.4 -0.9 - -0.6 -1.32 1.24 - -0.61 -0.74 -1.4 -0.94 -5.84 0.36 1.11
0.64 1.16 -0.32 - -0.08 -0.47 -1.88 0.07 0.22 0.37 -0.17 1.03 -0.76 1.7 0.21 0.13 -1.71 -1.59 -1.17 - -3.16 - -0.41 -0.18 -1.65 0.16 1.09 -0.05 - -1.79 -0.27 0.94 -0.84 0.24 -2.91 0.19 2.17
- - - - -6.78 4.96 -4.15 - -5.06 -5.76 -2.16 1.97 -4.18 - -7.33 -4.28 - -6.13 -7.19 - - - - - -6.64 - - - - - - - -8.45 - -6.26 -4.12 0.54
Zm00001d033132 (GRMZM2G414192)
- - - - -10.02 3.51 1.6 1.58 1.3 2.27 -0.08 0.28 -2.75 -5.55 2.13 -7.09 - -4.98 -5.03 - -6.54 - -1.16 - -4.43 -4.22 -4.36 - - - - - - - -1.87 1.39 1.01
Zm00001d033662 (GRMZM2G453296)
- -2.78 -1.31 1.14 -1.31 -3.24 - -1.65 - - -1.95 -2.58 - 2.75 -7.73 1.4 -3.14 -2.1 0.03 -4.78 2.68 -0.91 0.47 -1.73 -2.69 -1.36 -1.37 -2.96 1.66 2.44 -0.33 - -3.15 -2.53 -2.12 -2.02 1.26
- - - 4.26 -5.23 1.8 - - - - 0.77 0.09 - - - -2.54 - - -0.92 -1.66 -0.94 - - - 2.33 - - -1.81 - - 1.94 - -2.2 - -3.01 -0.85 -
Zm00001d034418 (GRMZM2G342856)
-3.44 -1.81 -3.27 -0.01 0.85 1.16 0.11 1.43 -5.22 -5.4 0.09 0.86 -6.04 -0.74 -2.66 -1.26 -1.59 -0.89 -1.61 0.29 -0.24 -2.41 2.58 -1.96 -0.4 -5.34 -2.82 0.42 - -0.7 1.88 1.74 -2.18 -1.67 -0.57 -0.26 0.99
Zm00001d034540 (GRMZM2G049370)
- - - - -9.54 3.18 3.83 -2.86 - -5.18 2.43 0.99 - - -0.75 -5.01 - - -3.55 - -2.73 - - - -3.69 - - - - - - - - - -8.92 0.52 1.92
Zm00001d035511 (GRMZM2G144343)
- - - - - 5.21 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Zm00001d037550 (GRMZM2G450233)
-7.56 -9.21 -3.78 -1.63 0.07 0.37 -0.05 -3.29 -0.76 -0.89 -0.17 3.21 -4.91 -0.28 1.31 -2.83 -11.07 -1.17 -1.87 -9.8 -7.55 -7.28 1.79 -8.24 0.04 2.11 -4.02 -2.5 -3.64 -0.44 -9.62 - -6.86 -3.8 -1.76 1.09 2.42
- - - - 0.06 5.01 - - - - - - - - - -3.04 - - - - 0.94 - - - - - - 0.77 - - - - - - - - -
Zm00001d038850 (GRMZM2G111017)
-1.58 -0.74 -0.71 0.79 0.18 0.68 -1.19 -0.54 -0.68 -0.53 0.63 1.14 -1.16 0.71 0.68 0.35 0.35 -0.83 0.22 -4.71 -0.09 -0.58 -1.45 0.49 -0.19 -2.49 -0.72 -0.95 -2.67 2.29 -0.18 -2.72 -1.74 -1.48 0.49 0.07 1.04
- - - - -1.97 4.91 - - - - - -4.79 - - - 0.69 -0.27 - - - - 0.68 - -2.99 - - - - - - - - - - 0.09 -5.13 0.47
- - - 2.7 - 3.53 2.05 - - - - -0.52 - - - -2.36 -0.8 - - - - 3.02 - - - - - - - 1.71 -1.2 - - - 0.04 -1.16 -
Zm00001d041863 (GRMZM2G395039)
- - - - -1.32 3.95 -2.13 - - -2.59 2.52 0.32 - - - -0.1 - - 0.7 - - - - -1.36 -3.69 -1.44 - -0.59 - - - - -2.95 - 2.55 -0.38 1.54
- - - 4.68 -2.39 - 2.23 - - - - -2.04 - - - -5.51 - - - - - - - - 2.63 - - - - - - - - - - - -
Zm00001d042008 (GRMZM2G047409)
- - - - -6.94 3.0 3.84 2.55 - - 0.33 1.13 -2.92 - -0.23 -4.5 - -2.68 -3.06 -9.31 -3.2 -2.12 0.06 - -4.08 -2.76 - -6.29 - - - - - - -2.26 0.27 0.04
Zm00001d042156 (GRMZM2G471367)
- - - - 1.41 - - - - - - 0.67 - - - -1.02 - -0.25 -1.86 -4.77 0.43 - - - - - 4.79 -1.97 - - 0.35 - - - -5.49 -0.68 -
-3.58 - - - -4.27 4.43 -0.84 - -3.99 -4.69 1.57 -0.15 - - 1.7 -2.46 -3.9 -5.05 -2.19 -2.63 -4.28 - - - -3.73 - - -1.76 - 0.69 -3.05 -0.46 -4.01 -5.89 -3.62 -2.19 1.88
- - - - -1.55 2.51 - - - 0.75 - 1.09 - - 0.44 -1.16 - -1.43 0.39 -4.32 - - - - - 3.28 -1.86 -5.94 - - - - 0.36 -2.85 -6.16 1.83 3.11
Zm00001d044954 (GRMZM2G066358)
-5.26 -4.84 -6.08 -0.2 0.31 -4.45 -5.53 -1.61 -4.03 -3.19 0.82 2.63 -2.26 3.14 1.73 1.35 -3.34 -4.69 0.37 -6.65 -3.16 -3.89 -1.25 -5.43 -3.17 -2.3 -2.83 0.21 - 1.7 -3.85 - -3.46 -2.88 -4.73 0.12 1.61
Zm00001d046242 (GRMZM2G110862)
-5.85 -6.68 -1.8 -3.78 -3.84 3.24 0.93 0.21 0.26 0.39 0.32 0.31 -3.25 0.54 -0.37 -0.58 0.86 -1.22 0.19 -6.62 0.77 -0.02 -1.21 -0.1 -0.37 0.37 -0.28 -1.15 - 0.36 -0.14 -2.78 -2.77 -1.64 -3.79 0.54 -0.13
Zm00001d047619 (GRMZM2G471629)
- - - - - 5.19 - - - - - - - - - -1.07 - - - - - - - - - - - - - - - - - - - - -
Zm00001d049693 (GRMZM2G702411)
- - - 3.87 -2.25 3.91 - - - - - -1.02 - - -3.24 -2.68 1.25 - - -1.57 - - - - 0.71 - - -3.17 - - - - -0.95 - -1.92 - 0.16
- - - - - 5.15 - - - - - - - - - 0.6 - - - - - - - - - - - - - - - - - - - - -
- -4.7 -4.15 -0.59 -0.77 -1.16 -0.57 -0.48 -0.24 -0.18 2.01 2.8 -3.7 1.12 1.57 -1.94 -1.52 -1.24 -1.58 - -1.78 -0.34 -0.57 -3.91 -0.31 0.93 0.17 -1.07 - -0.11 1.25 - -1.69 -0.35 -2.15 0.62 1.15
- -0.57 - - -4.35 - - - - - - 0.68 - - - -1.15 - - -3.36 - -0.88 - - - - 4.67 - 1.37 - - - - 2.29 - - -0.82 -
Zm00001d050120 (GRMZM5G803886)
- - - - -0.56 - - - - - 0.24 2.45 - - 0.26 -0.95 - - -3.39 - -4.98 - - - -2.3 - -2.22 -3.49 - - 1.49 4.39 - -0.66 -4.94 -0.48 1.1
Zm00001d050158 (GRMZM5G815757)
- - - - - 4.9 - - - - - - - - - - - - - 2.85 - - - - - - - - - - - - - - - - -
Zm00001d050427 (GRMZM2G077336)
- - - 4.35 -0.64 - - - - - - 2.18 - 2.39 - 0.35 - - - - - - - - - - - - - - - - -3.28 - - 2.26 -
Zm00001d051722 (GRMZM2G455238)
- - - - 1.17 - - - - - - 3.82 - - - 1.56 - - 4.15 - - - - - - - - - - - - - - - - - -
Zm00001d051920 (GRMZM2G410499)
- - - - - 4.58 - - - - - 0.85 - - - 2.23 - - - - 2.74 - - - - - - - - - - - - - - - -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.