Heatmap: Cluster_650 (HCCA cluster)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Root (elongation zone)
Root (meristematic zone)
Root (stele)
Root (tip)
Root
Leaf (3rd leaf of seedling)
Leaf (3rd leaf)
Leaf (apex)
Leaf (bundle sheath)
Leaf (mesophyll)
Leaf (Seedling)
Leaf
Internode
Stalks
Shoot
Shoot (apex)
Tassels (primordia)
Tassels
Anther
Pollen
Ear (immature)
Ear (inflorescence)
Ear (leaf)
Ear (primordia)
Ear
Silks
Kernels (germinating)
Kernels
Maternal transfer zone
Nucellus
Embryo
Endosperm (transfer layer)
Endosperm
Seeds
Coleoptyle (5 day)
Seedling
Whole Plant
Zm00001d007258 (GRMZM2G067915)
-4.81 -5.44 -4.37 - -1.93 2.42 1.45 -0.26 -0.22 -0.61 0.81 0.77 - -2.75 0.8 -2.92 -5.39 1.92 1.87 -0.44 -3.99 -0.53 2.24 -4.83 -1.29 -1.74 -2.79 -0.46 -1.79 -1.67 -1.55 -1.47 -0.79 -1.98 -0.38 0.42 0.2
Zm00001d011735 (GRMZM2G069203)
-2.28 -5.61 -6.57 -0.61 -1.17 2.63 2.5 1.36 0.12 -0.38 -0.4 1.02 - -3.23 -1.88 -5.28 -9.83 0.16 1.77 -1.64 -6.55 -5.96 1.76 -6.56 -3.43 -1.99 -2.02 -4.28 0.6 -6.53 1.88 -4.6 -5.98 -5.06 -7.82 -0.32 0.22

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.