Heatmap: Cluster_167 (HCCA cluster)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Root (elongation zone)
Root (meristematic zone)
Root (stele)
Root (tip)
Root
Leaf (3rd leaf of seedling)
Leaf (3rd leaf)
Leaf (apex)
Leaf (bundle sheath)
Leaf (mesophyll)
Leaf (Seedling)
Leaf
Internode
Stalks
Shoot
Shoot (apex)
Tassels (primordia)
Tassels
Anther
Pollen
Ear (immature)
Ear (inflorescence)
Ear (leaf)
Ear (primordia)
Ear
Silks
Kernels (germinating)
Kernels
Maternal transfer zone
Nucellus
Embryo
Endosperm (transfer layer)
Endosperm
Seeds
Coleoptyle (5 day)
Seedling
Whole Plant
- - - - - - - - - - - - - - 4.62 - - - - - - - - - - - - - - - 3.34 - - - - 1.14 -
Zm00001d002849 (GRMZM2G136469)
-0.88 -2.35 -3.28 -0.67 -1.45 1.03 -0.42 0.27 1.57 1.9 -0.0 0.95 - -4.71 1.79 -2.3 -1.47 -0.15 -3.34 - -1.05 -0.63 -2.0 0.58 0.25 -0.13 -1.38 -0.61 1.32 -2.52 0.95 0.39 -2.87 -0.18 0.59 0.66 -1.26
Zm00001d003018 (GRMZM2G089806)
- - - - -4.08 -3.99 -4.62 -2.99 - 0.39 - -0.97 -0.66 - 2.94 -2.42 -0.29 -0.9 -2.93 - 0.26 0.08 - 0.28 0.23 1.87 3.85 -3.23 - - -1.54 - -4.54 -0.08 - -0.45 -
Zm00001d003594 (GRMZM2G072955)
2.98 - - - 1.95 - - - - - - -0.74 - - - 1.14 - - 3.06 - - - - - - - - - - - - - - - 2.04 3.32 -
-3.44 -3.27 -3.56 -2.4 -2.61 -0.24 -0.04 0.61 1.9 1.57 -5.39 1.28 1.03 - 2.33 -0.91 -2.81 0.51 0.56 -3.78 -6.14 -0.35 -0.68 0.79 0.11 0.09 -1.51 -1.2 0.79 -4.03 -2.76 0.52 -3.21 -0.91 -0.1 0.45 -0.41
Zm00001d005786 (GRMZM2G115388)
-2.61 - - - -6.01 - - -3.13 1.62 2.77 0.79 0.52 - - 4.23 -5.61 - - -1.04 -4.1 - - - - - 0.27 0.49 -5.76 - - - - - - -3.33 0.65 -
Zm00001d006274 (GRMZM2G042712)
-2.29 -1.35 0.81 - -0.5 0.64 0.31 -0.0 0.85 0.94 -1.22 0.08 0.29 -1.54 1.95 -0.43 -0.03 -0.49 -1.95 -4.48 -2.69 -1.67 -1.64 -1.27 -0.13 2.5 0.05 -1.37 -1.58 0.25 -0.38 - -2.44 -1.71 1.13 0.59 0.09
Zm00001d006279 (GRMZM2G343365)
-2.82 -6.6 -2.96 - -4.07 -3.24 -4.83 -5.5 0.37 -0.14 -4.62 -1.59 -0.22 -1.21 2.04 -3.2 -7.46 -1.88 -4.82 -7.74 -2.84 -3.34 - -6.85 -0.68 4.26 -1.1 -3.84 - - -4.29 - -5.14 -1.36 2.38 -0.42 0.17
Zm00001d006282 (GRMZM2G156451)
-1.29 -4.88 -1.33 - -3.39 -3.83 -5.21 -5.42 0.97 0.39 - -1.42 0.83 -1.47 2.36 -3.42 - -0.84 -4.02 -7.08 -2.65 -3.91 -5.08 -3.98 -0.73 3.97 -1.78 -3.05 - - -2.8 - -5.92 -1.59 2.32 0.24 -0.63
Zm00001d006283 (GRMZM2G156470)
-2.32 - 0.23 -3.57 -1.39 -4.32 -4.11 -3.08 -0.22 -0.45 - -1.85 0.73 -0.31 1.95 -2.86 -7.13 -0.23 -6.56 - -3.35 -3.88 - -5.51 -0.0 4.05 -1.04 -4.04 - - -3.24 - -8.24 -1.93 2.46 -0.07 -0.83
Zm00001d006285 (GRMZM2G151656)
-6.2 -7.1 -8.17 - -7.2 -5.35 -4.76 -2.6 1.45 1.02 - -1.21 0.1 -2.91 2.33 -3.14 -3.62 -0.05 -5.16 -6.85 -1.48 -1.97 - -3.52 -0.03 3.26 0.3 -4.8 -0.2 - -4.77 - -7.14 -2.31 3.16 0.49 -3.52
Zm00001d006726 (GRMZM2G090493)
-1.89 -2.54 -2.6 -0.25 -0.4 0.05 0.09 -2.42 0.41 -0.04 -0.71 0.18 0.8 1.49 1.61 -0.33 -1.68 -0.83 -0.63 -2.18 1.32 -0.12 0.25 0.31 0.07 -0.4 -0.53 0.25 -0.54 1.34 -1.96 0.31 -0.34 -0.5 -1.84 0.55 -0.25
Zm00001d007343 (GRMZM2G311011)
- - - -0.45 0.17 -4.17 -2.21 - 0.94 1.41 - 0.42 - 1.43 2.8 -0.56 - -2.36 -2.93 - -5.32 - - - -2.38 -1.93 - -6.35 3.09 - - - - - 2.46 1.79 -1.55
Zm00001d008722 (GRMZM2G473147)
-2.14 - -1.69 1.92 -0.98 1.45 2.12 -2.84 1.18 0.46 -2.52 -0.44 -1.74 -3.48 0.82 0.69 -1.79 -0.13 -2.4 - 2.23 1.16 -0.71 0.31 1.07 - -2.3 -2.32 - - -1.59 -0.03 -3.93 -1.58 -1.93 0.77 -1.76
- - - - - - - - - - - -2.21 - - 3.27 - - - - - - - - - - - - - - - 4.76 - - - - - -
0.22 -0.61 -1.29 -0.65 -0.42 -1.14 -1.33 0.64 0.72 0.59 -3.3 0.13 1.12 -0.92 1.24 -0.78 -0.05 0.01 -0.03 -4.7 0.15 -0.64 -0.62 0.55 -0.2 1.19 0.07 0.27 0.89 0.25 -0.82 0.71 -0.52 -1.12 -0.21 0.08 -1.35
Zm00001d013614 (GRMZM2G112957)
1.44 -1.4 0.62 - 0.06 -1.09 -1.02 0.18 0.91 0.7 -3.71 0.68 -0.33 -0.93 2.49 -1.3 -1.63 0.05 -1.98 -4.29 -0.13 -0.31 -0.25 -1.59 -0.78 0.69 1.34 -0.44 0.14 -2.15 -1.19 -1.16 -2.79 0.16 0.52 0.48 -1.4
Zm00001d015463 (GRMZM2G150864)
-4.05 - -0.17 1.55 -1.31 0.99 0.53 -2.23 1.29 1.66 -1.42 0.14 -4.91 -6.35 1.64 -7.8 -6.87 0.12 -0.38 -2.11 -6.01 - 0.63 - -2.34 3.33 -1.5 -5.43 - -1.07 -5.09 -3.9 -6.56 -6.07 0.85 0.54 -0.62
- - - - -2.99 - 0.39 0.7 - - - -2.99 - - -2.14 -0.45 1.84 - -0.83 - -0.75 - - -0.17 1.47 2.6 - -1.02 - - - - -0.56 -0.68 4.05 - -
Zm00001d017412 (GRMZM2G110541)
-0.4 -4.85 -1.51 1.31 1.32 0.15 0.19 0.89 0.05 0.1 -2.72 0.71 - 0.71 2.8 -1.3 -2.77 -0.37 -2.25 - -1.47 -3.06 -1.83 -4.23 -1.26 0.83 -1.67 -0.68 - - -0.82 -0.63 - -3.38 0.46 1.43 1.77
- - - - -5.97 0.61 -1.77 -0.89 1.89 1.63 -0.73 -0.46 -0.55 1.29 0.67 -0.81 0.29 0.47 0.13 - 1.23 -0.53 -1.09 1.25 -0.29 0.74 2.19 -0.75 -1.57 -0.83 -3.4 -2.89 -3.54 -1.62 -4.78 0.81 -0.66
Zm00001d019441 (GRMZM2G109738)
-0.78 - - - -2.17 -0.41 -2.73 - 1.04 1.68 - -0.17 - - 3.94 -4.2 -2.86 0.07 -2.32 - -0.64 - 0.77 -4.26 -0.25 1.22 -0.18 - - - -4.21 - -3.94 -2.16 0.89 1.83 -2.52
Zm00001d020459 (GRMZM2G071112)
-3.62 -4.12 -6.19 - -4.14 -3.0 -2.32 0.18 -2.83 - -3.33 -1.59 -0.86 -0.67 3.64 0.08 -0.85 -0.12 -2.09 -5.53 -0.22 -0.57 - 0.67 0.73 0.02 -1.27 -0.74 - -1.1 -0.53 -1.57 -3.68 -0.39 2.28 1.41 0.72
Zm00001d020757 (GRMZM2G075837)
-1.0 -7.01 -3.58 -4.81 -2.06 -4.48 -4.49 -6.79 -0.39 -1.11 -6.5 -1.01 -2.28 1.03 1.92 -4.37 - 0.02 -4.08 -10.87 -4.04 -5.46 -7.21 -9.83 -1.3 4.38 -7.51 -3.78 -1.76 -5.47 -0.88 -2.42 -6.41 -3.03 1.72 -0.17 -1.22
Zm00001d021454 (GRMZM2G012636)
-2.53 -1.8 - - -3.62 -4.0 -3.51 0.51 0.83 0.71 -0.9 0.36 1.79 -2.97 1.91 -1.61 -1.75 -1.99 -4.0 - -1.58 -1.42 -2.93 -0.17 1.12 3.27 -0.38 -2.79 - - 0.06 -2.84 -0.97 -2.14 1.9 -0.18 -1.37
Zm00001d021455 (GRMZM2G042429)
-2.8 -3.08 - - -3.2 -3.22 -7.34 -3.18 -0.61 -1.25 0.25 0.15 1.05 -1.42 1.19 -1.87 -3.17 -3.22 -4.33 -8.46 -1.83 -3.93 - -3.44 0.07 4.29 -0.29 -1.16 - -2.59 -1.3 - -2.5 -2.69 1.38 0.17 -0.19
Zm00001d021456 (GRMZM5G835903)
-5.7 -4.25 -3.96 - -3.81 -1.03 -0.85 -0.94 0.67 0.4 -2.84 -0.44 -0.09 0.56 1.86 -2.58 -5.85 -0.88 -3.09 -7.59 -1.88 -2.93 -2.29 -4.94 -0.93 3.62 -1.27 -1.85 - - -3.53 - -6.82 -1.81 2.97 0.52 -0.4
-2.81 - 1.62 - -0.22 - -1.48 0.31 -0.73 - -0.5 -0.89 - -1.06 3.28 -1.05 - 1.64 -1.24 - 0.25 - - 0.42 0.66 - - -1.78 - - - 2.8 0.6 -1.21 -2.47 -0.04 -0.38
0.09 -1.04 -1.54 -0.49 -1.15 -0.12 -1.41 0.41 1.25 1.01 -1.08 0.17 0.08 0.59 0.91 0.22 0.2 0.77 0.72 -2.69 0.3 0.19 0.22 0.82 -0.11 -0.86 -1.65 -0.93 0.02 -0.34 -1.12 -0.82 -1.87 -2.32 0.98 0.61 -0.63
Zm00001d022101 (GRMZM2G351482)
-3.92 -2.11 -1.58 -3.63 -0.58 0.56 0.71 0.38 1.55 1.07 -1.35 1.06 -1.25 -2.98 1.76 -0.73 -1.93 -0.4 1.02 -4.7 0.14 -0.23 -0.85 -0.12 -0.37 0.57 -0.69 -1.02 - 0.34 1.27 -2.96 -2.44 -1.46 0.95 1.21 -0.57
Zm00001d022188 (GRMZM2G102786)
-1.27 -1.58 -1.3 -0.79 -0.62 -0.27 0.58 0.25 1.18 1.17 0.22 0.91 -0.15 0.24 1.47 -0.25 -0.39 -0.93 -0.05 -9.56 -0.66 -1.51 0.97 -1.07 -0.64 0.51 -0.59 -0.49 0.81 0.38 -0.75 -0.41 -0.57 -0.7 -1.39 0.65 0.11
Zm00001d022630 (GRMZM2G158394)
-14.55 - -7.91 - -10.14 0.5 -3.01 -1.85 0.8 0.58 1.42 1.03 -6.61 -7.39 2.74 -6.84 -4.29 0.9 -0.91 -8.89 -5.01 -6.03 -0.5 -12.73 -1.0 3.31 -1.83 -2.31 - -7.18 -10.44 - -8.63 -2.98 1.88 0.66 0.11
Zm00001d023869 (GRMZM2G337706)
- - -3.9 - -4.21 2.47 1.47 1.56 2.49 0.51 0.29 1.35 -4.42 2.18 1.71 -1.31 - -3.41 -10.38 -9.22 -7.9 - 2.05 - -1.42 -6.31 -3.69 -5.37 -2.83 - - -3.14 -7.84 -6.53 -2.67 -0.74 -0.35
Zm00001d023870 (GRMZM2G457898)
- - -6.75 - -10.19 -2.87 -2.03 0.92 2.39 -0.26 0.33 -0.08 - 2.98 2.74 -7.13 - -2.16 -7.51 - -7.67 - 3.3 - -1.75 - -5.9 -7.9 -0.29 - - - - -8.42 -6.55 -3.01 -0.98
Zm00001d023872 (GRMZM2G303536)
- - - - -4.05 -0.04 -1.03 1.34 1.7 0.14 - -0.29 - 2.88 2.03 -2.04 - - - - - - 3.92 - -1.88 - - -2.49 - - - - -4.5 -4.48 - -3.27 -1.68
Zm00001d023873 (GRMZM5G892308)
- - -3.38 - -5.52 -0.04 -1.62 0.56 2.61 0.88 -0.43 0.58 -5.19 2.3 3.33 -4.26 - -2.7 -10.15 - -5.75 - 2.56 - -1.09 - - -7.53 - - - - -8.75 -6.36 -2.67 -1.66 0.9
2.12 - - - -1.06 - - - - - - 1.06 - - -0.31 0.48 - - - 4.53 - - - - - - - 2.25 - - - - - - - - -
-0.24 -1.95 -1.87 -0.1 -0.79 0.39 -0.05 1.03 -1.04 -0.87 0.21 0.04 0.34 -0.41 0.43 0.02 0.6 -0.02 0.0 -6.17 0.61 0.91 0.57 0.36 -0.21 -0.67 -0.92 -0.35 0.08 0.77 -0.72 1.02 -0.8 -1.27 0.99 -0.21 -1.04
Zm00001d025154 (GRMZM5G834439)
- - - - -1.82 - - - - - - -2.09 - - -0.45 0.46 - - - - 0.73 - - - 2.29 - - 1.8 - - 4.32 - - - 0.68 1.5 -
Zm00001d025248 (GRMZM2G331861)
- - - - - - - - - - - - - - 4.0 - - - - 4.4 - - - - - - - - - - - - - - - - -
Zm00001d026480 (GRMZM2G143352)
-6.28 -0.15 -3.83 - 0.29 0.35 -0.56 -1.02 0.74 -0.1 -1.44 0.23 0.45 -0.11 3.25 -1.16 -4.89 1.32 -1.64 -5.24 -2.9 -2.34 -2.39 -1.19 0.44 0.07 0.59 -0.37 -1.24 - -1.67 0.59 -4.66 0.39 -0.24 1.33 -1.18
Zm00001d027766 (GRMZM2G031790)
-9.94 - - - -6.73 -10.31 -4.25 -3.5 -7.86 -7.01 - 0.16 -2.22 -2.82 3.18 -1.73 -1.67 0.72 -0.06 -6.32 -0.01 -2.08 -7.71 -0.22 -0.23 3.94 -1.09 -1.16 - -0.88 -0.83 - -5.74 -2.68 0.43 -0.3 -1.22
Zm00001d029350 (GRMZM2G003138)
-3.74 -4.64 - -1.8 -0.75 -1.16 -1.94 -3.53 -4.13 -2.26 -0.28 0.2 - 2.48 3.79 -3.81 -4.36 -1.69 0.68 -4.9 -2.33 -4.91 -4.6 -1.88 -3.53 -1.87 1.21 -2.71 - - -0.45 - -7.99 -3.99 2.29 0.25 0.3
Zm00001d029583 (GRMZM2G174708)
-3.43 -8.57 -3.71 -0.64 0.38 0.24 0.38 -1.84 -0.32 -0.16 -3.7 0.8 -6.21 -2.25 3.83 -2.53 - -0.49 0.63 -10.14 -3.48 -4.67 -3.48 -6.76 -2.69 1.48 0.78 -0.61 - -2.22 -1.2 - -6.02 -2.46 1.65 0.79 -1.3
Zm00001d032144 (GRMZM2G131266)
- -6.05 -5.07 - -1.61 -1.58 -2.39 -3.15 -6.65 -2.16 -2.63 0.54 - -3.56 4.04 -5.4 -6.91 0.06 -4.84 -6.52 -7.38 - -2.81 -7.42 -0.42 1.83 3.14 -2.27 - - -0.61 - -5.63 -3.95 0.46 -0.58 -2.06
Zm00001d032719 (GRMZM2G143883)
-9.53 - -11.18 -2.41 -2.95 -0.65 -2.34 -0.6 1.76 1.93 -2.42 0.28 -3.74 -2.48 0.77 -4.05 2.0 0.67 -0.98 -5.56 1.83 1.26 -3.24 1.56 1.12 -1.98 -3.59 -1.77 -0.6 0.35 -4.09 -3.22 -2.42 -1.62 -0.88 1.49 -0.49
Zm00001d034561 (GRMZM2G402675)
-0.33 -0.86 -1.37 -0.03 -0.49 -0.37 -0.46 0.43 1.16 1.17 -0.68 0.6 0.22 0.57 1.8 -0.29 -0.15 -0.21 -0.49 -1.83 -0.69 -1.86 0.19 0.0 -0.82 0.2 -0.96 0.04 0.09 0.15 -0.57 -0.69 -0.22 -0.7 -0.93 0.61 0.15
Zm00001d036045 (GRMZM2G136571)
- - - - -4.31 - -4.2 -6.02 -4.01 -5.58 - -0.2 - -4.41 2.29 -7.32 - -2.02 -0.49 -1.17 -4.87 - - -7.67 -1.37 4.1 -5.7 -0.66 - 3.25 -5.74 -1.99 -6.22 -1.24 -2.16 -1.31 -1.17
Zm00001d037400 (GRMZM2G110168)
- - -2.16 - -1.77 - -3.49 -2.28 - -0.87 - -0.18 - - 4.05 -0.42 - - -0.49 -3.2 -2.48 - - - -3.49 - 1.9 - 2.79 - - - -4.45 - 2.22 -0.11 -3.08
Zm00001d037956 (GRMZM2G089218)
-2.42 -2.07 -2.72 -2.27 -2.06 -3.76 -2.73 -0.37 0.14 0.27 -1.11 0.02 0.61 -2.1 1.14 -0.74 -1.45 -0.43 -1.75 -7.33 -0.47 -0.35 -1.14 0.5 -0.06 -0.19 0.66 -0.17 3.03 -0.97 -1.01 2.52 -2.32 -0.24 -1.04 -0.12 -2.48
Zm00001d038250 (GRMZM2G175860)
-10.65 - -1.9 0.43 -2.27 0.48 0.13 -0.77 1.6 2.06 -0.35 0.03 1.5 1.08 0.64 0.29 0.05 -0.84 -3.42 -12.04 1.4 -0.48 -0.49 1.69 1.26 - -4.59 -3.02 - -0.01 -4.61 - -7.03 -5.21 -1.83 0.78 -0.36
Zm00001d038362 (GRMZM2G059121)
-0.68 -1.25 -1.86 -0.66 -0.86 -0.05 -0.93 -0.49 1.0 1.05 -1.82 0.01 0.59 0.27 1.51 0.03 0.26 -0.23 -0.23 -4.41 0.52 -0.29 -0.77 0.63 -1.14 0.02 -0.24 -0.08 -0.49 0.54 -1.95 1.8 -0.52 -1.32 -0.82 0.48 -0.36
Zm00001d041596 (GRMZM2G033767)
-5.47 - - - -4.81 -1.66 -2.43 -1.82 -3.64 -3.83 -1.17 0.13 - -0.22 3.05 -4.79 - 0.3 -0.22 -2.7 -5.17 - - -4.07 -4.65 -4.98 -4.12 1.16 0.63 -3.13 -0.57 3.07 1.79 -0.59 0.72 1.01 1.05
Zm00001d043699 (GRMZM2G111666)
-3.97 -4.19 -3.79 1.01 -1.58 -0.04 -4.49 -0.86 -3.55 -3.03 -2.8 -0.04 -4.0 - 2.41 -3.45 -5.18 -7.13 -5.07 -7.14 -3.36 -1.97 -2.18 -6.34 -2.11 2.84 3.26 -1.43 - - 0.42 1.25 -5.04 -2.58 1.06 0.32 -0.14
- - - - -1.31 - - - - - - -1.74 - - - 0.6 - 3.91 - 3.88 - - - - - - - 0.67 - - - - 1.78 - - - -
Zm00001d044686 (GRMZM2G010868)
- - -13.86 -9.26 -11.77 -1.0 -0.66 -2.96 0.86 1.42 -3.19 0.05 -5.1 -1.42 2.06 -4.61 -11.86 0.03 -1.95 -9.25 -4.7 -5.19 -1.97 -9.01 -1.79 3.99 -0.16 -1.72 -3.32 -7.07 -0.38 -3.66 -4.71 -1.88 -0.17 1.41 0.73
Zm00001d045414 (GRMZM2G301546)
- - - - - 1.91 - - 4.16 2.59 - -1.84 - - 2.62 -4.12 - - - -1.34 - - - - - - - - - - - - -1.56 - 0.96 -2.23 -
Zm00001d047190 (GRMZM2G151476)
- - - - -2.69 1.6 -1.11 0.09 -1.49 1.17 -5.09 0.79 - -6.05 2.4 -3.79 -4.2 1.88 0.35 -3.64 -1.16 -5.21 -2.98 -1.28 -2.21 3.38 -4.4 -2.16 - - -1.67 - -6.02 -5.28 1.19 1.18 -0.65

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.