Heatmap: Cluster_114 (HCCA cluster)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Root (elongation zone)
Root (meristematic zone)
Root (stele)
Root (tip)
Root
Leaf (3rd leaf of seedling)
Leaf (3rd leaf)
Leaf (apex)
Leaf (bundle sheath)
Leaf (mesophyll)
Leaf (Seedling)
Leaf
Internode
Stalks
Shoot
Shoot (apex)
Tassels (primordia)
Tassels
Anther
Pollen
Ear (immature)
Ear (inflorescence)
Ear (leaf)
Ear (primordia)
Ear
Silks
Kernels (germinating)
Kernels
Maternal transfer zone
Nucellus
Embryo
Endosperm (transfer layer)
Endosperm
Seeds
Coleoptyle (5 day)
Seedling
Whole Plant
- - - 3.91 -3.1 - - - - - - -6.88 - - - -3.23 - - 0.71 - - - - - - - - - - - - - - - 0.17 4.07 1.14
- - - - - - - - - - - 1.29 - - - 0.3 - - - 3.31 - - - - - - - - - - - - - - - 4.55 -
Zm00001d004243 (GRMZM2G154685)
-7.55 -7.83 0.31 - 0.45 -10.17 -5.32 -3.67 - - -0.36 1.65 - -3.43 - 0.8 -3.1 0.65 -4.46 -0.06 -1.93 -1.4 0.51 -6.61 -2.61 - -4.73 -5.82 - -2.01 -0.94 - -9.13 -2.57 0.13 4.43 -6.78
- - - - -3.55 -0.59 -1.19 - - - - -0.72 - - - -2.38 -2.18 -2.02 -4.01 -4.42 3.08 0.31 3.76 - -2.74 - - -2.62 - - 1.23 - -2.54 -5.5 -2.7 2.86 -0.09
Zm00001d008577 (GRMZM2G333635)
- - -5.38 -2.86 -3.83 -3.22 -2.9 -1.74 -7.13 -6.58 -4.49 0.34 -4.62 -2.7 -5.16 -1.69 -4.76 -3.89 -3.13 -8.52 -1.85 -2.34 0.31 -6.65 -1.73 1.09 - -3.38 - -1.34 3.17 - -5.83 -5.59 -1.04 4.31 -3.79
Zm00001d008745 (GRMZM2G700411)
- - - - - - - - - - - 2.53 - - - -1.73 - - - - - - - - - - - - - - - - 1.68 - - 4.79 -
Zm00001d008919 (GRMZM2G015037)
-5.96 -3.51 - -3.79 -3.13 -5.89 - -0.02 -4.78 -6.94 - -1.7 -1.2 -0.25 -0.79 -0.85 2.07 1.1 0.87 -9.29 2.5 1.72 - 1.32 1.07 -0.09 -2.3 -1.68 - 2.12 -1.63 -3.15 -3.21 -2.45 -0.48 1.9 -1.86
Zm00001d009385 (GRMZM2G382918)
- -5.17 -4.29 -3.9 -2.71 -1.05 -3.33 -3.99 - - -5.76 -2.46 -3.01 -3.55 -5.05 -3.46 -1.7 -1.67 -2.28 -2.73 3.26 1.27 3.41 0.57 -1.29 - -3.51 -4.0 - - 0.12 -1.87 -1.94 -6.88 -0.59 2.82 -0.9
-1.77 -2.79 1.2 -1.61 -0.43 -7.39 - -1.55 -6.85 - -3.87 -2.17 0.18 -0.68 -3.67 -0.78 -0.46 -0.97 -3.8 -5.59 0.93 0.67 - 0.88 0.68 -5.96 -0.72 -0.81 1.35 - 0.98 3.4 -1.52 -0.83 -0.67 2.02 -
Zm00001d012510 (GRMZM2G010468)
-4.51 - -1.35 -2.95 -1.34 0.58 -0.45 -1.91 -0.88 -2.07 0.17 1.38 - -1.94 0.48 -1.56 - -1.06 -1.38 -2.13 -5.33 -7.25 2.0 -7.74 -0.9 0.41 0.19 -0.49 0.11 -2.86 -2.29 -4.76 -4.65 -2.12 -0.55 3.49 2.17
Zm00001d014486 (GRMZM2G043147)
-3.12 -1.52 -0.43 -1.88 -0.8 -1.29 -1.53 0.33 -2.93 -2.67 -1.79 -0.04 -0.94 -0.07 -1.92 0.27 0.2 0.41 -0.27 -2.13 1.43 0.74 -1.23 -0.75 0.87 -0.86 -0.79 1.34 -0.34 -0.62 0.79 -0.84 1.4 0.98 -0.29 2.15 -1.2
Zm00001d014896 (GRMZM2G131988)
-0.44 -0.31 1.08 0.28 0.21 -1.13 -1.42 -0.62 -1.53 -1.53 -0.7 -0.39 -1.59 -0.13 -1.13 0.19 0.14 0.24 0.59 -4.08 -0.29 -0.87 -0.32 -0.11 -0.84 0.21 0.02 0.48 1.49 0.78 -0.28 -0.01 0.09 0.66 0.12 1.48 -0.63
- - - - - - 3.79 - - - - 1.16 - - - -1.19 - - - - - - - - - - - - - - - - - - - 4.36 -
Zm00001d020898 (GRMZM2G069651)
-1.91 -1.16 -0.9 -0.95 -0.87 -1.52 -1.81 0.46 -3.27 -3.05 -1.07 -0.61 -1.08 0.34 -1.64 0.11 -0.25 0.51 0.5 -6.42 1.15 1.73 0.19 0.38 0.86 -0.12 -1.22 -0.55 -2.28 0.19 0.69 -3.89 -0.27 1.27 0.5 2.2 -1.47
Zm00001d021148 (GRMZM2G343859)
- - - - -3.88 -0.41 4.11 - - - - 0.1 - - 0.1 -1.66 0.45 1.15 1.38 0.13 -1.88 - - - 1.4 - - -2.12 - - - - -1.29 -0.47 -0.79 2.11 -
Zm00001d022459 (GRMZM2G322547)
- - - - -4.97 - -7.08 -5.36 - - -3.22 -3.53 - -3.86 -7.12 -2.04 -5.38 -5.16 -3.21 -9.15 -0.51 - -3.29 -2.35 -7.22 -5.53 -4.75 -7.38 - -0.63 3.88 -4.63 -4.75 -0.9 -8.25 4.26 -4.42
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 5.21 -
Zm00001d023705 (GRMZM2G481471)
-5.04 - - 2.62 -1.17 -0.06 -2.57 -1.58 - -2.86 - -1.17 - - -3.45 -0.57 2.38 - 0.18 -3.49 0.77 1.34 - -0.37 -1.47 1.14 - -1.74 - 2.86 -0.17 - -1.31 -3.15 0.51 1.2 -0.18
- - - - - - - - - - - - - - - 1.28 - - - - - - - - - - - - - - - - - - - 5.11 -
Zm00001d024973 (GRMZM2G098677)
-2.08 -0.19 0.2 1.15 0.09 0.36 -3.42 -0.05 -1.13 -0.37 1.05 -0.58 -1.64 - -1.03 0.69 1.8 1.02 -0.71 -7.03 -3.77 - 1.8 0.98 -1.26 0.68 -2.4 -1.58 - - 1.11 -4.58 -2.4 0.86 -0.14 1.61 -1.57
Zm00001d024975 (GRMZM2G098697)
-2.0 -0.21 0.31 1.16 0.23 0.28 -2.95 -0.57 -0.83 -0.45 0.71 -0.56 -1.59 - -1.09 0.94 1.67 0.86 -1.07 -6.74 -2.68 - 1.65 0.93 -0.66 0.61 -1.83 -0.84 - - 1.32 - -1.93 0.72 0.73 1.55 -2.27
- - - - - - - - - - - - - - - -2.69 - - -1.05 -0.7 - - - - - - - 1.4 - - - - - - - 5.05 -
- - - - -4.57 -3.05 -2.02 - - - -2.22 -0.72 - - -6.06 -2.09 -1.96 - -0.2 -2.57 -2.78 - 2.94 - -2.27 -2.89 - -5.76 2.13 3.73 -4.99 - -5.24 -5.0 -7.79 3.0 -1.56
Zm00001d025312 (GRMZM2G466048)
- - - - - - - - - - - 1.42 - - - 0.8 - - 3.69 - - - - - - - - - - - - - - - - 4.3 -
- - - - -5.0 - - - - - - - - - - -0.67 - - - 2.88 - - - - - - 4.4 1.81 - - - - - - - 2.15 -
Zm00001d028561 (GRMZM2G306679)
-12.63 - -6.35 - -2.1 -6.97 -7.23 -4.14 -7.81 -7.39 -3.77 1.28 -8.08 -7.95 -6.4 -4.84 -6.47 -2.6 -0.51 -4.79 2.0 -5.15 0.23 -6.88 0.04 -8.97 -7.56 -1.68 0.56 - -4.45 -1.97 -1.34 -4.84 -6.46 4.61 -5.38
Zm00001d028588 (GRMZM5G804658)
-6.81 -4.83 -1.49 -3.95 -0.13 -4.9 -4.22 -1.7 -1.72 -2.3 -1.95 0.05 -0.62 0.9 -1.63 0.02 -0.45 -0.42 -1.89 -6.6 0.14 -0.73 -5.32 -2.97 -0.27 0.83 -1.16 0.44 - 0.7 2.29 -2.36 -0.19 0.64 1.23 3.19 -0.07
Zm00001d029108 (GRMZM2G019027)
- - - - -3.46 -2.31 - - - - - -5.69 - 0.14 -3.74 -0.22 - -1.39 0.6 -0.71 - - - - - - - - - - - 1.42 -2.23 - - 4.87 -
Zm00001d030848 (GRMZM2G075631)
- - - - -4.88 -1.54 -2.38 -4.99 -2.03 -1.6 - -1.25 - - -1.11 -6.08 -1.94 -0.31 -0.06 -2.38 2.06 1.27 3.79 0.89 -1.08 - - -4.44 - - -0.04 - -4.46 -4.97 -0.71 2.98 -1.41
-1.68 -2.85 -2.3 - 0.89 -1.24 -2.45 - - - 2.51 -0.54 - 0.86 -4.84 0.77 - 1.39 -1.19 -4.9 -1.38 - - -2.52 -1.69 - - -0.16 - - - - 1.08 0.53 1.6 3.64 -
Zm00001d032606 (GRMZM2G045699)
-1.55 -1.18 0.07 -1.58 -1.45 -0.33 -3.02 0.38 -1.41 -0.94 -0.98 -0.13 -2.58 - -1.16 -0.19 1.89 -0.3 -0.75 - -1.32 - -0.32 0.74 -0.55 0.01 -2.59 0.49 - - 1.74 -2.76 -0.64 1.87 -0.47 3.12 -
- - - - -0.51 - - - - - - -0.08 - - - -1.27 - - - - - - - - - - - - - - - - 0.64 - - 5.06 -
Zm00001d036555 (GRMZM2G075096)
- - 1.73 - -0.36 - 0.85 - - - 0.85 -0.83 - - -0.41 0.29 - - 1.28 -2.81 0.53 - - - -1.95 - 0.58 2.03 - 2.57 - - - - 2.24 1.67 1.61
Zm00001d037633 (GRMZM2G008252)
-0.64 -1.21 -0.46 - -0.72 -0.88 -3.4 0.34 -3.4 -3.66 -1.11 -0.71 - - -0.62 -2.16 -1.3 -2.09 -2.64 - 2.06 -2.0 -0.55 0.04 -1.72 - -1.4 -0.9 - - 1.52 1.93 0.0 -1.32 -0.04 3.68 -0.87
- - -2.95 - -2.31 2.41 1.52 1.52 1.73 1.14 0.0 1.3 1.45 0.68 1.47 0.94 - -0.62 - - -6.1 - - - -2.37 - - -6.66 - - - - - -6.68 0.12 2.32 -0.62
- - - - - - - - - - - 2.74 - - 3.57 - - - - - - - - - - - - - - - - - - - - 4.2 -
Zm00001d039357 (GRMZM2G001566)
- - - - -1.65 1.09 - - - - - -2.82 - - - -1.85 4.53 - - - - - - - - - - - - - - - - -1.98 - 3.43 -
Zm00001d039728 (GRMZM2G039104)
- - - - -1.34 - - - - - - -4.8 - - -4.13 -2.5 -1.0 - -0.62 - - - 4.43 - - - - -0.03 - - - - - -0.65 - 3.59 -
- - - 1.29 -1.61 1.92 1.68 - - - -0.6 0.09 - - -5.05 -0.32 2.38 - -0.14 -5.69 -0.03 - -0.86 - -6.94 0.92 - -0.4 - 2.62 -1.2 - -0.59 -2.44 - 2.49 0.4
Zm00001d039933 (GRMZM2G437100)
-8.05 -11.04 -0.31 -3.72 -2.37 -3.45 -4.86 -3.69 -6.02 -6.18 -2.13 -1.28 -5.67 -5.03 -3.24 0.31 -2.59 -1.88 -5.98 -8.79 1.38 -3.11 -2.0 -3.52 -0.8 -2.62 -3.13 0.23 0.74 -8.13 3.61 -0.89 0.22 0.47 -4.18 3.47 -4.3
Zm00001d039935 (GRMZM2G422240)
-5.95 -10.54 0.23 -4.28 -0.55 -4.05 -3.57 -1.78 -3.08 -2.16 -1.88 1.71 -5.57 0.14 -2.1 1.64 -9.83 -2.74 -5.44 -5.39 -1.92 -6.32 -3.98 - 0.31 -1.74 -5.55 -1.81 -1.34 -6.36 -0.03 -2.47 -3.68 -2.53 -4.0 4.46 -3.76
Zm00001d039936 (GRMZM2G158232)
-2.42 -5.3 1.63 -4.34 -0.58 -3.28 -2.18 -0.41 0.11 0.61 0.04 1.79 -2.06 1.21 -0.72 2.46 -8.14 -1.36 -5.41 -4.34 -1.11 -3.86 -2.71 -6.48 0.69 -0.79 -2.86 -1.96 -2.21 -6.62 -0.45 -4.89 -3.69 -0.92 -1.51 3.37 -3.58
Zm00001d039942 (GRMZM2G049767)
-0.6 -5.63 -1.93 -2.86 -0.59 -5.88 -3.57 - -5.57 -5.85 -2.12 0.69 -4.69 -4.42 -2.72 -2.4 -8.23 -2.75 -2.18 -6.27 -2.25 -6.32 - - -3.98 -2.05 - -1.72 1.54 - -1.48 -1.23 -0.11 -4.23 -1.9 4.73 -3.22
Zm00001d044695 (GRMZM2G025250)
-2.7 -0.74 -2.2 -0.88 0.53 -3.9 -5.74 -0.23 -3.93 -3.88 -1.33 -1.29 -0.61 -0.48 -1.03 0.44 1.17 0.25 0.03 0.33 0.31 0.35 -1.24 0.4 0.43 1.47 0.94 -0.25 0.03 - -0.56 0.85 -1.72 -0.52 0.37 2.16 0.87
- - - - -2.6 - - - - - - -4.09 - - - -6.75 - -2.38 - -1.99 0.64 - - - - - - -3.27 - - - - - - - 5.12 -
- - - - 0.33 - - - - - - -1.6 - - - -3.71 - - -4.58 -2.47 2.6 - - - 1.5 - - 0.5 - - -0.96 - - 0.34 - 4.53 -
Zm00001d047553 (GRMZM5G899188)
- - - - - - - - - - - 1.96 - - - - - - - - - - - - - - - - - - - - - - - 5.05 -
Zm00001d047799 (GRMZM2G366532)
-9.27 - -2.19 -7.98 -0.92 -2.63 -8.75 -3.96 - -7.78 -2.11 0.47 -7.5 -2.16 -5.32 -1.85 -8.48 -1.41 0.74 -6.65 -2.08 -5.17 1.78 -7.63 -1.98 -3.04 -1.74 0.65 0.5 -5.49 3.32 -1.21 -0.66 1.51 -2.54 3.36 -3.68
Zm00001d047841 (GRMZM2G479260)
-6.69 -6.07 -2.61 -6.93 -3.17 -9.62 -8.27 -1.45 -8.55 -10.05 -4.49 0.95 -4.76 -5.33 -4.69 -3.54 -4.31 -1.72 -0.23 -6.81 1.64 -3.22 -4.57 -4.73 -1.53 -6.22 -5.32 -1.3 -4.28 -4.69 -0.91 -4.9 -2.23 -6.13 -4.8 4.8 -6.2
Zm00001d048592 (GRMZM2G162282)
- - - - -12.41 1.49 -0.2 1.41 -0.21 -1.2 3.54 1.82 - -3.69 -0.6 -9.77 - -4.02 -6.72 -9.56 -6.61 - 1.35 - -1.4 -7.35 - -10.77 - - - - -10.16 -9.47 -4.49 3.24 -0.06
Zm00001d051128 (GRMZM2G118766)
-2.42 -4.42 -3.17 -3.39 -0.79 -2.05 -2.49 -0.33 -4.35 -3.02 -1.41 0.38 0.01 1.12 -1.45 0.87 -1.96 -0.24 0.56 -1.48 1.72 -0.99 0.14 -0.31 -1.32 -0.54 -0.87 0.06 1.53 0.9 -0.75 1.62 -1.6 -1.34 -4.25 2.7 -0.89
Zm00001d051415 (GRMZM2G303244)
-0.68 -0.83 -2.17 -1.74 -1.5 -4.67 -4.88 0.01 -4.55 -3.79 -2.45 -0.95 -1.18 0.67 -2.66 0.07 1.14 -0.23 -1.73 -9.52 1.74 2.55 - 0.57 0.65 -3.84 -1.46 0.64 - 1.09 1.2 -1.66 0.32 -0.21 -0.41 2.1 -1.73
Zm00001d051715 (GRMZM2G369705)
- - - - - 0.62 - - - - - -0.13 - - - -2.27 - - - - 3.0 - - - - - - - - 4.01 - - 2.14 - - 2.55 -
Zm00001d051727 (GRMZM2G051456)
- - - - - 1.81 - - - - - -3.17 - - - -1.46 - - 0.94 - - - - - - - - - - 4.75 - - - - 1.1 1.05 -
Zm00001d053838 (GRMZM2G419891)
- - - - -0.51 0.86 - - - - - 0.28 - - - -1.08 - 0.56 - - -0.87 - - - 0.49 - - -0.33 - 4.53 - - -2.7 -0.23 - 2.15 -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.