Heatmap: Cluster_98 (HCCA cluster)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Root (elongation zone)
Root (meristematic zone)
Root (stele)
Root (tip)
Root
Leaf (3rd leaf of seedling)
Leaf (3rd leaf)
Leaf (apex)
Leaf (bundle sheath)
Leaf (mesophyll)
Leaf (Seedling)
Leaf
Internode
Stalks
Shoot
Shoot (apex)
Tassels (primordia)
Tassels
Anther
Pollen
Ear (immature)
Ear (inflorescence)
Ear (leaf)
Ear (primordia)
Ear
Silks
Kernels (germinating)
Kernels
Maternal transfer zone
Nucellus
Embryo
Endosperm (transfer layer)
Endosperm
Seeds
Coleoptyle (5 day)
Seedling
Whole Plant
Zm00001d002848 (GRMZM2G053977)
-3.93 -5.54 0.07 -4.35 0.82 0.16 0.49 -0.23 1.21 1.49 1.0 0.69 2.06 -0.76 1.29 1.36 - -0.88 -2.5 -10.15 - -4.89 0.22 - -0.92 -5.96 -3.01 -6.61 - - -4.08 0.87 -8.06 -5.03 0.82 2.06 0.77
- - - - - - - - - - - - - - - 2.18 - - - - - - - - - - - - - - - - - - - 5.02 -
Zm00001d005749 (GRMZM2G057011)
- - - 1.85 2.12 1.66 0.76 - -1.39 0.21 0.95 0.34 - 0.12 -1.8 2.43 0.84 - -3.94 - -3.92 - - -0.94 -1.77 -0.05 - -1.59 - - - 0.54 -5.47 -0.5 -3.22 1.99 1.28
Zm00001d005823 (GRMZM2G125482)
-2.0 - -3.29 2.83 1.34 1.69 -2.66 -4.58 0.49 -0.21 0.32 0.64 -2.82 -1.18 -0.52 0.73 -5.64 -2.9 -3.86 - -5.96 -6.19 -0.25 -7.69 -1.29 -5.58 -7.17 0.1 3.15 -5.08 -2.76 - -3.93 -0.22 -2.79 0.8 0.14
Zm00001d006211 (GRMZM2G103881)
-2.73 -3.42 -2.38 -1.66 -0.12 -2.95 -4.14 0.01 -3.84 -5.08 0.55 0.64 3.1 1.06 -1.4 2.14 -2.2 0.02 0.26 -2.79 -0.99 -1.28 0.93 -1.97 -0.26 -8.07 -0.99 0.77 1.4 -2.26 -0.74 -1.26 -1.57 -0.42 -4.35 0.41 -0.81
Zm00001d007732 (GRMZM2G115630)
- - - - -0.15 - - - - - 3.34 3.31 - -1.29 - 2.44 - - -5.02 -4.6 -0.54 - - - - - - -0.82 - - - - -3.45 - -3.81 -0.24 2.97
-2.87 -4.67 -0.11 1.86 -0.27 -0.83 -0.96 0.46 -2.27 -2.17 -3.01 0.25 2.52 1.57 0.99 1.94 -2.99 -1.21 -1.51 - -3.57 -0.68 -0.23 -0.84 0.17 -1.38 -0.26 0.35 1.06 - -0.51 0.47 -2.55 -1.13 -1.45 -0.44 -2.89
0.2 0.21 2.68 - 0.67 -5.23 -2.54 -0.42 -0.07 -0.7 - -3.0 0.89 -2.08 -0.21 1.08 -0.69 1.2 -0.82 -1.24 -0.48 -0.89 - 0.37 0.18 -0.92 1.1 -0.2 - - 0.19 -2.78 0.24 1.2 -0.46 -0.45 0.7
Zm00001d010616 (GRMZM2G034421)
-3.83 -5.97 -3.36 -2.75 -0.13 -2.11 -5.45 -3.65 0.83 3.51 0.89 0.41 -2.81 - -3.5 -0.28 -1.36 -4.38 -6.07 -7.29 -3.24 -1.37 - -2.42 -0.2 -2.85 - 1.23 2.79 - -2.29 - -4.21 2.05 -7.92 1.12 -4.2
- - - - 1.26 - - - - - - 2.6 - - 0.5 0.16 - - 1.75 - - - - - 2.87 - - 0.45 - - 3.02 - - - 2.56 - -
Zm00001d011844 (GRMZM2G307756)
-5.24 - - - -2.16 -3.67 -4.15 0.75 -1.22 -1.27 -4.5 -2.96 3.17 - 0.27 2.97 1.74 -0.88 -1.86 1.32 -2.61 -2.95 - -2.15 -0.26 -3.63 -4.32 2.11 - -1.16 - - -6.35 0.62 -0.5 -0.69 -3.18
Zm00001d017975 (GRMZM2G376105)
- - -3.1 - -0.56 -0.88 -1.83 - -2.51 - 0.59 1.7 - - -0.91 -4.42 - - -2.09 -3.13 - - 4.76 - -0.26 - - -5.73 - - - - - - 0.17 -0.91 -
Zm00001d020408 (GRMZM2G126566)
-4.63 -4.42 1.62 -1.79 1.66 -4.52 -6.65 0.87 -1.35 -3.25 - -2.21 1.37 1.31 -1.47 1.99 -0.22 1.5 -0.83 - 1.86 -0.3 - 1.77 0.46 -2.75 -1.42 -4.13 -0.87 - -0.9 - -6.66 -2.39 -0.02 0.39 -0.37
Zm00001d020492 (GRMZM2G125653)
-9.07 -8.04 - -3.97 -1.42 -1.26 -0.64 -1.04 0.58 1.23 -0.01 0.8 -1.06 0.91 -1.13 1.19 0.86 -2.14 0.86 -6.39 0.1 -4.24 0.84 -1.28 -1.23 -7.93 -0.78 0.42 2.14 -0.96 1.5 -0.21 -0.74 -0.39 -3.78 1.64 -0.71
0.31 -0.16 0.11 - 0.18 -5.13 - -1.37 -2.21 -0.35 - -2.06 1.06 - 0.73 0.68 -1.28 0.06 0.27 -5.47 1.23 -0.12 - 1.5 -1.23 0.76 -0.42 0.49 0.79 - -0.88 2.96 -0.25 -0.01 -4.18 -0.55 -
Zm00001d021655 (GRMZM2G009103)
-2.0 -4.24 0.67 -4.63 -0.11 -3.64 -3.02 -3.0 -0.94 -1.96 -1.58 -0.23 1.17 -0.01 -1.33 2.03 -2.05 0.88 -2.79 -8.88 -4.85 -2.28 0.76 -4.41 -0.17 2.92 -2.55 0.64 2.46 -1.37 -1.96 -1.38 -4.17 -0.3 -0.11 0.23 -2.17
-0.15 -0.53 2.19 - 0.76 - - 1.95 -1.16 -0.01 - -1.01 - - -0.98 1.42 -1.92 0.88 -2.92 - -0.6 1.36 - 1.13 0.04 0.3 0.46 -1.05 - - 0.77 1.48 -0.83 0.57 -3.94 -0.61 0.24
- - -2.1 -2.12 -2.15 -0.63 -1.21 0.64 1.64 0.49 2.02 2.3 0.91 -0.07 -1.81 1.27 - 0.87 -2.52 - - - -1.49 - -1.03 - - -4.54 2.55 - - -0.05 -9.32 -4.93 -2.98 2.22 -3.35
Zm00001d023332 (GRMZM2G005207)
-7.67 -7.87 -4.0 -4.6 -3.57 -0.34 -1.96 -0.74 1.25 2.51 -1.62 -0.57 1.27 -4.9 -1.51 2.76 -0.34 -1.16 -3.12 -7.41 -3.23 -1.91 -1.19 -0.91 0.04 - -2.86 0.98 -0.53 -4.64 -7.41 -1.68 -2.72 1.87 -4.26 2.42 -1.26
Zm00001d023524 (GRMZM2G301124)
-2.36 -1.16 1.36 -0.34 1.1 -1.24 -1.6 -0.61 -0.89 -1.67 1.22 0.36 -1.65 -0.55 -0.41 0.65 0.03 -0.12 0.23 -0.52 -0.18 -0.54 -1.64 0.77 -0.38 1.18 -0.92 -0.27 - 2.4 -0.09 - -1.67 -0.32 0.44 -0.56 -1.03
- - - - -1.0 1.62 -0.72 -1.34 -0.0 1.09 -0.24 0.27 - -2.63 0.77 2.15 -0.31 -3.59 -5.49 - 1.65 0.13 1.67 1.42 0.64 -0.03 - 0.93 - -1.02 - - -4.36 1.28 -2.05 0.86 -1.06
1.28 0.25 1.46 - 0.37 -3.2 - -2.64 0.7 -1.34 - -1.29 1.43 - 0.2 1.01 -2.53 -2.15 -2.21 -1.42 1.63 -0.93 -1.04 1.34 -0.8 - -2.46 0.28 2.84 - -0.59 0.17 -1.42 -0.64 -0.39 -1.15 -
0.53 1.74 2.12 - -0.51 - -2.8 -0.79 0.03 -1.72 - -3.52 1.42 - -0.71 1.29 -2.91 0.43 -1.69 - - - - -1.09 0.4 - -2.06 0.53 - - 0.91 2.43 1.14 1.63 -0.46 -0.44 -
Zm00001d026523 (GRMZM2G008730)
- - - - 2.93 - - - - - - 3.77 - - - - - - - - - - - - - - - - - - - - - - - 3.98 -
Zm00001d028171 (GRMZM2G071292)
-1.0 -1.77 2.56 0.1 1.28 -1.06 -0.61 -0.52 -0.89 -1.42 -0.62 0.56 0.05 0.23 0.24 1.0 -0.33 0.16 -1.36 -2.38 -1.32 -0.81 0.36 -0.55 -0.23 -4.15 1.32 -0.67 0.41 0.23 -1.64 -3.69 -1.18 -0.33 -0.31 0.07 0.08
Zm00001d028469 (GRMZM2G341309)
-6.18 - 0.93 - 1.44 0.54 0.68 -0.04 1.83 1.12 2.27 0.81 -3.0 -1.9 0.08 0.68 -2.81 -1.41 -2.47 -7.39 -6.38 -2.2 1.66 -1.52 -0.22 - - -3.11 1.73 -2.57 -2.22 -0.26 -6.51 -0.06 -4.38 0.54 -0.81
- - - - - - - - - - - 3.63 - - 3.02 - - - - - - - - - - - - - - - - - - - 1.81 -0.69 3.63
Zm00001d031549 (GRMZM2G040509)
- - - - -6.77 -1.32 1.7 -5.07 1.95 2.63 -0.14 0.68 1.65 - 0.48 0.99 - -1.82 -4.51 - -4.98 -2.64 0.96 - 1.78 - -3.16 -1.66 1.0 - - - -4.42 -3.39 -2.22 2.4 -2.02
- - - - - - - - - - - - - - - 5.21 - - - - - - - - - - - - - - - - - - - - -
Zm00001d033169 (GRMZM2G532387)
-1.59 -5.56 0.96 1.77 1.28 -3.41 -3.45 -0.93 -1.25 -3.22 -3.84 -1.04 1.43 -1.81 0.86 0.83 -2.12 0.0 -1.97 -8.28 -1.96 -2.72 0.73 -2.22 1.15 0.11 -0.35 -0.27 2.72 -4.41 -0.95 1.08 -1.94 -0.9 -0.27 -0.61 -2.15
- - - - - - - - - - - - - - - 5.21 - - - - - - - - - - - - - - - - - - - - -
- - - - - - - - - - - 5.16 - - - 0.44 - - - - - - - - - - - - - - - - - - - - -
Zm00001d037710 (GRMZM2G079098)
-2.5 - 3.01 -0.81 0.16 -3.83 -0.52 -0.41 -0.73 1.29 - -2.61 -1.86 2.0 -0.15 1.39 -1.4 1.25 -1.49 - -0.03 -0.92 - -4.21 1.28 - -1.11 -0.37 - - -3.25 - -5.1 1.24 1.28 0.36 -
Zm00001d037909 (GRMZM5G898274)
-2.87 -6.82 -2.55 - -0.78 -3.07 -2.13 -3.85 0.39 1.5 -5.51 -1.55 0.42 -1.21 -4.36 1.76 -2.74 -2.45 -2.47 - 0.61 0.37 -6.55 0.1 0.52 - - -0.67 3.86 -4.85 -3.15 1.63 -3.21 0.01 -3.18 -0.93 -6.9
Zm00001d037913 (GRMZM2G309071)
- - - 1.0 -0.62 -1.88 -2.01 -2.25 -0.48 2.25 -0.84 2.81 1.04 -1.07 1.12 2.16 -1.16 -0.8 -0.88 - -0.82 -1.45 -0.81 -1.36 -3.49 - -3.23 -0.42 - -1.6 -2.99 - -2.04 0.12 - 2.33 -2.8
- - -5.77 -2.84 -0.69 -1.2 -0.06 -1.67 0.71 1.54 1.62 1.32 -1.9 -0.86 -0.1 1.77 -1.67 -3.45 -2.9 -6.4 -3.87 -1.26 0.87 -2.0 -0.79 - -5.46 -0.49 3.08 - 0.38 -0.19 -4.65 0.53 -1.62 1.05 -1.67
- -0.79 - - 0.22 -1.29 - - - - 1.78 -0.16 - 1.29 1.62 2.79 - - 2.21 -1.49 2.31 1.33 - - - - - - - - -1.16 - - - 1.6 -3.03 1.0
Zm00001d038908 (GRMZM2G061568)
-2.85 - -0.24 2.43 2.33 -0.09 -1.02 0.2 -0.08 0.7 -0.85 0.2 1.23 1.24 0.61 1.83 -3.67 0.34 -1.33 - -3.89 -4.6 -1.26 -5.26 -0.14 -3.72 -3.14 -0.92 - -1.92 -3.84 -0.87 -4.87 -2.28 -0.8 0.88 0.56
- - - - - - - - - - - -0.69 - - - 1.17 - - - 2.32 - - - - - - - - - - - - - - - - 4.86
-3.08 -2.09 -0.78 -5.35 0.17 -6.37 -6.41 1.81 -0.85 -1.34 -7.97 -3.45 2.91 -5.0 0.96 1.79 0.22 -0.1 -0.97 -9.81 -8.53 -2.44 - -2.86 0.79 0.76 0.02 0.11 -3.04 0.31 1.65 -8.44 -2.94 1.19 -0.09 -0.23 -2.3
Zm00001d040029 (GRMZM2G011523)
2.28 1.13 -1.89 -0.49 1.14 -6.89 -9.41 0.56 -1.74 -2.25 -9.54 -4.07 1.83 -11.93 1.62 0.71 -2.41 -0.96 -2.5 -8.41 -5.56 -4.4 -4.15 -2.32 -0.66 -1.77 -1.62 1.98 -2.88 -3.63 0.09 -4.2 -1.25 1.7 2.15 -1.18 -2.77
- - - - -2.51 - - - 0.25 0.85 -1.34 0.41 - 0.42 -1.09 2.75 - 1.81 -3.7 -3.07 - - 2.71 - -1.48 -1.57 - 0.81 - - - - -2.83 -1.52 0.14 2.55 1.78
Zm00001d045666 (GRMZM2G354611)
- - - - - - - - - - - 4.12 - - - 4.29 - - - - - - - - - - - - - - - - - - - - -
Zm00001d048302 (GRMZM2G141121)
-1.58 - - - -0.47 - - -0.13 - - - -2.97 2.3 - -0.51 2.5 - - -2.58 -4.22 1.49 -1.24 - -0.94 1.22 - -0.11 1.97 - 3.04 -2.25 - -3.03 1.68 - -2.44 -1.01
Zm00001d051804 (GRMZM2G036464)
-1.24 -0.28 0.17 0.59 0.88 -0.24 -0.78 -1.12 0.05 -0.08 -0.86 0.36 1.84 1.72 0.57 1.05 -1.27 0.71 -0.94 -0.52 -0.37 -0.33 0.65 -0.2 0.22 -0.99 0.12 -1.98 -6.54 -1.43 -2.47 -4.82 -4.06 -2.21 -0.66 1.38 -0.47
- -3.51 -4.02 - 0.09 3.33 2.54 - - - 1.17 0.9 - - -6.72 1.59 - - 0.92 - - 2.84 - - -3.38 -0.39 - - - - - - -2.54 - -3.01 0.18 0.56
- - - - - - - - - - - 3.49 - - - -0.92 - - - 3.95 - - - - - - - - - - - - - - - 3.29 -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.