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View as: (view raw or row-normalized)
View using InCHLib : here ( Experimental feature, still under development)
(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
| Gene | Immature female cone | Immature male cones | Cambium and expanding xylem | Cambium | Expanding xylem | Expanding and mature xylem | Maturing xylem | Wood | Bark | Bark, healthy | S1 xylem tracheids | S1 whole sections | S2 ray cells | S2 xylem tracheids | S2 whole sections | Dead late wood | Phloem and cambium | Dear early and late wood | Bark, root and butt rot | Vegetative shoots - needles | Vegetative shoots - stem | Vegetative shoots | Girdled twig - stem | Dried twig - needles | Girdled twig - needles | Needles | Needles - dawn | Needles - later afternoon | Needles - midday | Needles - night | Light, 1 hour | Light, 3 hours | Light, 5 hours | Light, 7 hours | Light, 9 hours | Light, 13 hours | Light, 15 hours | Darkness, 1 hour | Darkness, 3 hours | Darkness, 5 hours | Darkness, 7 hours | Darkness, 11 hours | Vegetative buds | Female buds | Male buds | Buds | Pineapple galls | Somatic germinants - abnormal type | Somatic germinants - normal type | Cell culture - H20 - 5 days | Cell culture - KI added - 5 days | Cell culture - KI added - 20 days | Cell culture - KI removed - 4 days | Cell culture - KI removed - 12 days | Cell culture - solid medium | Somatic embryogenic cell line |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.03 | -3.37 | - | - | - | - | - | -2.1 | -0.02 | - | - | - | - | - | - | - | - | - | -7.16 | -0.22 | -0.49 | 0.3 | -1.9 | 1.58 | -0.04 | 1.33 | -0.79 | 1.18 | 1.49 | 1.38 | -1.02 | -1.54 | -0.94 | -0.7 | -0.82 | -0.75 | -1.71 | -0.42 | -0.52 | -0.29 | -0.96 | -1.1 | -1.49 | -1.54 | -6.54 | 0.06 | -1.08 | -3.25 | -3.51 | 2.44 | 2.07 | 2.16 | 1.76 | 2.71 | 1.38 | -3.06 | |
| 1.03 | -0.78 | -0.78 | -1.16 | -0.74 | -0.51 | -1.85 | -1.21 | -0.43 | -6.85 | -3.41 | -3.61 | -4.22 | -2.76 | -3.48 | -3.35 | - | -3.61 | -5.28 | -0.2 | -0.43 | 0.96 | 0.32 | 0.79 | -0.09 | 0.7 | -0.77 | -0.47 | -0.61 | -0.51 | 0.28 | -0.35 | -0.02 | -0.06 | -0.03 | 0.13 | 0.02 | 0.11 | 0.04 | 0.14 | -0.15 | -0.27 | -0.77 | -0.95 | -1.93 | 1.29 | 1.07 | -0.88 | -0.71 | 1.75 | 1.99 | 1.62 | 1.45 | 1.63 | 0.71 | -2.08 |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.