Heatmap: Cluster_323 (HCCA cluster)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Root (elongation zone)
Root (meristematic zone)
Root (stele)
Root (tip)
Root
Leaf (3rd leaf of seedling)
Leaf (3rd leaf)
Leaf (apex)
Leaf (bundle sheath)
Leaf (mesophyll)
Leaf (Seedling)
Leaf
Internode
Stalks
Shoot
Shoot (apex)
Tassels (primordia)
Tassels
Anther
Pollen
Ear (immature)
Ear (inflorescence)
Ear (leaf)
Ear (primordia)
Ear
Silks
Kernels (germinating)
Kernels
Maternal transfer zone
Nucellus
Embryo
Endosperm (transfer layer)
Endosperm
Seeds
Coleoptyle (5 day)
Seedling
Whole Plant
Zm00001d002682 (GRMZM2G019783)
-1.2 -0.92 0.63 1.08 0.86 -0.4 -0.11 -0.36 -0.58 -0.45 0.26 0.31 -0.45 0.06 -0.08 0.2 0.46 0.08 0.1 -9.65 -0.63 1.18 0.04 0.42 0.17 -0.94 -0.06 -0.81 1.48 0.07 -0.4 -5.1 -3.04 -0.1 0.16 0.13 -0.87
Zm00001d002730 (GRMZM2G170516)
-1.13 -1.49 -0.52 -0.56 -0.73 -0.14 -0.08 0.26 0.42 0.47 -1.2 0.86 -0.15 -0.28 -0.38 -0.01 -0.32 0.07 -0.55 -5.55 0.62 0.25 0.54 0.94 0.18 -0.9 -0.41 -0.42 -0.87 0.11 -0.88 2.01 -1.11 -1.74 1.12 0.01 -0.48
Zm00001d002819 (GRMZM5G825909)
-0.34 -1.31 0.32 1.2 0.54 -0.03 -0.56 -0.2 -0.69 -0.4 -0.89 0.52 0.19 1.72 0.24 0.26 -0.82 -0.24 -0.52 -4.61 -0.31 -0.3 0.48 -0.05 -0.62 0.71 -0.68 -0.12 -1.77 1.19 -0.81 -1.19 -1.72 -0.42 -0.17 0.58 0.18
Zm00001d005158 (GRMZM5G863076)
-8.1 -1.69 -8.97 -5.56 -0.96 0.0 -5.01 - -3.39 -4.32 1.62 3.11 - 0.46 0.7 -5.57 - -0.74 -3.98 -8.87 -8.64 - 3.83 -9.11 -0.45 -2.32 -0.65 -0.72 - - -2.21 - -0.77 -2.02 -1.16 0.28 -1.07
Zm00001d005328 (GRMZM2G085939)
-1.38 -1.24 -0.44 -0.28 -0.04 -0.17 -0.1 -0.33 -0.68 -0.38 -0.48 0.87 -0.29 0.5 -0.17 0.51 -0.1 0.04 -0.56 -3.32 1.69 -0.42 0.88 0.52 0.01 -0.87 -0.06 -0.1 -0.21 1.5 -0.6 -0.52 -0.87 -0.43 -1.46 0.24 0.3
Zm00001d006628 (GRMZM2G360517)
-0.95 -0.28 0.45 0.91 0.24 -0.98 -0.11 -0.78 -1.27 -0.62 0.01 0.1 -0.35 0.42 -0.51 0.55 0.27 -0.17 0.32 -7.09 -1.6 -0.53 0.08 -0.07 -0.63 0.3 0.31 0.56 -1.62 2.14 -0.08 -1.41 -0.55 0.19 -1.59 0.29 0.46
Zm00001d006629 (GRMZM2G060114)
-1.78 -0.78 -0.33 0.47 -0.45 -0.33 -0.17 -0.13 -0.72 -0.39 -0.9 0.98 1.03 0.8 0.23 0.37 0.22 -0.47 0.52 -4.96 0.19 -0.01 -0.94 0.07 -0.45 -0.09 0.26 0.36 -2.27 1.71 0.02 -2.28 -0.46 -0.66 -0.08 0.27 0.08
Zm00001d008591 (GRMZM2G119361)
0.21 -1.16 0.27 1.53 0.47 -2.21 -1.3 -1.53 -0.66 -0.68 -3.18 -0.22 0.92 0.6 -0.37 -0.27 0.16 -0.39 -0.11 -8.88 -0.72 0.51 -0.04 1.58 -0.28 -0.13 -0.04 0.19 -0.72 0.78 0.12 -0.31 0.31 -0.12 0.09 -0.16 -0.47
-0.62 -1.93 -0.48 -0.2 0.0 0.58 0.32 0.56 0.23 -0.12 0.02 0.88 -0.07 0.6 0.2 0.23 -0.3 -0.29 -0.84 -4.02 0.7 0.3 1.12 -0.42 0.01 -0.18 -0.25 -0.27 0.66 0.26 -0.38 -0.19 -1.62 -1.12 -0.92 0.1 0.2
Zm00001d012336 (GRMZM2G057075)
-1.16 -2.49 0.08 0.34 -0.05 -0.7 -0.8 -0.51 -0.54 -0.52 -1.63 0.46 0.73 0.15 -0.09 0.18 -0.33 -0.47 -0.78 -5.26 0.52 0.42 0.72 0.23 -0.16 0.62 -0.86 0.21 -0.16 1.92 -0.94 -0.94 -0.89 -0.95 1.5 -0.13 -0.17
Zm00001d012625 (GRMZM5G869971)
-0.62 -1.21 -0.06 0.59 0.95 -0.28 -0.75 -1.29 -0.35 0.03 -0.86 0.61 0.55 0.63 0.36 0.36 -0.47 0.23 0.75 -6.23 0.05 -0.44 -0.07 -0.4 -0.16 1.4 -0.71 -0.62 -0.01 1.1 -0.91 -1.14 -2.37 -0.66 0.03 0.3 0.24
-0.39 -1.01 -0.66 -0.15 -0.37 -0.0 0.54 -0.3 0.14 0.59 0.68 0.95 0.18 0.56 0.63 0.67 -0.17 -0.42 -0.49 -9.1 0.07 -0.59 0.31 0.24 -0.02 -1.13 -0.79 -0.05 -0.61 1.27 -0.87 -1.2 -1.33 -0.43 -0.75 0.78 0.39
Zm00001d012746 (GRMZM2G013391)
-1.73 -2.49 -0.41 2.12 1.96 0.25 0.63 -0.67 0.2 -0.22 1.42 1.44 -2.97 0.85 0.97 0.37 -0.97 -0.96 -2.3 -10.36 -0.15 -1.83 0.13 -0.4 -0.65 -1.4 -1.45 -1.52 - -2.07 -1.05 -3.64 -1.53 -2.54 -0.49 0.36 1.18
Zm00001d016655 (GRMZM2G020840)
-1.49 -4.67 -1.12 1.6 0.35 0.41 -1.03 -0.77 -0.18 -1.15 -0.01 1.06 -1.33 1.78 -0.2 0.75 -3.1 -1.19 -1.0 -10.05 -0.01 -1.2 1.03 -2.62 -1.05 0.4 -2.51 -0.44 2.22 1.2 -0.73 -0.29 -3.73 -0.6 -1.3 0.19 -0.81
Zm00001d018388 (GRMZM2G469142)
-0.72 -2.96 -0.71 0.77 0.9 -0.03 0.07 -0.11 -0.34 -0.02 -1.55 1.06 -0.05 0.15 0.89 0.45 -0.84 -0.72 0.2 -7.31 -0.13 -1.18 0.13 0.1 -1.05 -0.74 -0.53 0.14 0.68 2.02 0.82 -0.32 -2.71 -1.62 -2.79 0.15 -0.05
Zm00001d018826 (GRMZM2G093761)
-1.49 -1.72 0.12 0.8 0.45 -0.19 -0.08 -1.08 0.21 0.32 -0.46 0.57 -0.35 0.84 0.3 0.28 -1.08 -0.57 -0.61 -9.62 -0.44 -0.92 0.88 -1.13 -0.4 1.11 0.02 0.02 2.09 -0.5 -1.21 0.3 -2.3 -0.84 -0.56 0.03 -0.28
-1.0 -0.56 0.0 0.81 0.16 0.24 0.05 -0.5 -0.7 0.09 0.22 0.65 -0.6 0.85 -0.02 0.54 -0.09 -0.27 0.16 -3.69 -1.46 -0.49 0.49 -0.18 -0.67 -0.73 0.18 0.25 -3.21 1.5 -0.34 -2.2 -0.71 0.09 -1.3 0.92 0.95
Zm00001d023498 (GRMZM2G156506)
-1.32 -1.14 -0.39 0.78 1.92 -1.1 -1.43 -1.04 -2.29 -2.7 -0.34 0.6 0.3 0.94 0.04 0.41 0.93 -0.43 -1.84 - 0.09 0.17 -1.11 0.02 0.28 0.8 -0.69 -0.14 - 2.04 -0.6 -3.68 -3.23 0.13 -0.95 0.08 0.77
Zm00001d024143 (GRMZM2G146981)
- - - -1.68 1.02 -4.71 - -5.22 - - 2.41 4.0 - - 0.81 -2.92 -1.74 - -4.84 - -0.76 - -3.47 - - - - -6.57 - -1.77 -2.27 - -6.01 - -2.01 -0.02 3.1
Zm00001d025950 (GRMZM2G000973)
-0.06 -0.9 1.14 0.8 0.49 -1.46 -0.98 -0.44 -0.02 0.12 -3.52 -0.0 0.53 0.75 0.37 0.6 -0.66 0.12 -1.16 -10.95 0.01 0.14 -0.22 0.46 -0.19 0.77 -0.32 -0.39 -0.25 0.74 -1.1 -2.36 -1.77 -0.43 1.15 0.54 -0.08
Zm00001d026695 (GRMZM2G011590)
-2.91 -3.57 -0.75 0.66 0.3 -1.02 -0.57 -1.78 0.22 0.43 0.41 1.21 -0.27 1.33 0.83 0.03 -1.71 -0.63 -0.3 -6.74 -1.05 -1.66 -0.21 -0.29 -0.77 2.06 -0.79 -0.25 1.95 -0.32 -2.49 -0.52 -2.17 -0.55 -0.44 0.08 -0.08
Zm00001d026704 (GRMZM5G885706)
-0.89 -1.56 0.21 -0.91 0.45 0.39 0.25 0.45 -0.08 0.07 0.09 0.56 0.38 0.43 0.56 0.2 -0.53 -0.44 -0.33 -5.76 -0.18 0.16 -0.03 -0.8 0.18 1.12 -0.32 -0.4 0.76 0.42 -0.48 -1.08 -2.06 -0.56 0.05 0.49 0.19
Zm00001d027266 (GRMZM2G073979)
-0.54 -1.65 0.85 0.28 0.49 0.21 0.35 -0.2 -0.79 -0.33 0.51 0.7 -0.44 0.44 -0.05 0.42 -0.35 -0.47 -0.36 -6.65 -0.89 -0.3 -0.71 -0.85 -0.15 1.31 -0.07 -0.01 0.3 0.9 -1.16 -1.16 -1.88 -0.23 0.16 0.64 0.58
Zm00001d030098 (GRMZM2G158976)
-0.43 -2.44 -0.85 1.31 0.39 0.24 0.14 0.27 -0.31 -0.2 -2.9 0.91 0.13 0.71 -0.03 0.04 -0.53 -0.81 -0.97 -7.74 0.68 -0.85 1.75 0.24 -1.06 -0.71 0.43 -0.33 -0.66 -0.5 0.2 -0.14 -1.49 -2.16 -0.9 0.49 1.13
Zm00001d032899 (GRMZM2G017388)
-1.71 -3.17 -0.9 -1.84 -0.92 -0.93 -0.95 -1.67 -0.42 -0.69 -2.44 0.58 0.95 1.66 0.76 0.81 -2.71 -0.61 -1.61 -7.14 0.27 -0.2 -2.49 -1.35 -0.0 1.47 1.85 -0.15 0.47 2.2 -0.16 -1.97 -2.85 -1.19 0.39 0.05 -2.53
- - 0.52 - -0.28 - - - - - - 4.26 - - 2.68 -0.28 - - -2.08 - - - - 1.32 - - - 2.02 - - - - - - - 0.7 -
Zm00001d033316 (GRMZM2G472643)
-2.69 -5.34 -3.12 -1.31 0.07 1.04 1.94 -0.76 0.44 0.15 1.96 2.04 -2.2 1.54 0.48 1.6 -5.66 -4.23 -3.95 -11.9 -2.8 -6.56 1.84 -3.2 -2.49 -3.89 -1.99 -2.6 -0.98 -2.72 1.05 -4.87 -4.56 -4.09 -2.3 0.83 0.36
Zm00001d034521 (GRMZM2G047299)
-6.04 -9.9 1.09 -2.01 1.61 -1.26 -1.11 -2.29 0.66 -0.41 -0.89 0.94 -7.73 0.81 0.65 -3.37 -5.76 -1.66 -1.88 -8.1 -4.88 -4.22 1.69 -6.34 -1.53 0.23 2.42 -1.21 2.1 -0.64 -4.29 0.22 -3.94 -0.63 0.93 0.47 -0.19
Zm00001d034740 (GRMZM2G156459)
-0.98 -0.69 0.78 -0.25 0.76 -0.54 -0.71 -0.56 -1.06 -1.05 0.33 0.18 -0.34 -0.48 -0.44 0.24 0.61 0.09 -0.16 -5.03 0.27 -0.39 0.77 0.5 0.54 0.27 0.44 0.05 0.44 0.1 0.33 -2.46 -0.8 0.24 0.77 0.04 -0.22
-4.74 -2.24 -0.92 -0.73 -1.26 -0.25 -0.35 -0.18 0.03 0.51 -1.47 1.3 -1.72 1.27 0.04 0.23 0.02 -0.03 -0.86 - 1.0 -0.84 0.09 0.56 -0.61 -0.03 -0.4 -0.09 0.75 2.01 -0.17 0.11 -1.65 -0.8 -1.45 0.43 0.34
Zm00001d036440 (GRMZM2G134930)
-3.18 -2.24 -0.68 0.67 1.04 0.29 -0.14 -1.22 -0.07 0.02 0.71 1.09 -0.21 1.39 0.54 0.4 0.75 -0.94 -1.54 -6.0 -1.31 -0.92 0.87 -1.46 -0.51 0.28 0.87 -1.03 -0.23 0.27 -1.17 -2.1 -4.03 -0.89 -1.16 0.77 1.3
-6.61 - -0.14 0.99 0.6 0.3 1.57 0.29 1.07 0.58 1.46 1.62 -1.58 0.91 0.64 0.65 -1.82 -1.94 -2.08 -4.56 0.54 -0.08 -0.66 -2.8 0.14 -1.66 -2.42 -2.57 -1.26 -0.05 -1.24 -2.37 -3.26 -3.66 0.03 0.34 1.12
Zm00001d038478 (GRMZM2G390436)
-3.78 -7.7 -0.23 1.78 -0.15 -3.72 -1.97 -0.65 0.84 0.22 0.71 2.44 -0.48 -0.01 1.49 1.49 -1.82 -0.64 -0.16 -7.97 -1.86 -1.27 -6.26 -0.24 -0.94 0.56 -1.78 -0.72 - 0.7 -1.61 -1.88 -1.23 -0.74 0.56 0.78 -0.54
Zm00001d038684 (GRMZM2G120173)
-0.94 0.2 0.02 0.26 0.14 -0.7 -0.87 -0.09 -0.45 -0.49 -1.37 0.87 0.09 0.05 0.15 -0.04 0.05 0.03 0.66 -3.62 -0.2 -1.13 -0.1 0.86 -0.33 -0.43 0.4 0.67 0.01 0.47 -0.22 -1.33 0.51 0.78 -0.31 0.2 0.14
Zm00001d039173 (GRMZM2G026884)
-6.7 -7.14 -2.18 -0.83 0.08 0.09 -0.27 -0.8 -1.68 -1.1 2.13 1.98 -2.64 0.08 0.23 -1.61 -0.72 -0.32 0.22 -7.49 -0.19 -0.65 2.37 0.14 0.77 0.29 -0.49 -1.14 -0.1 0.1 -1.58 -4.11 -3.61 -0.7 -0.45 0.49 0.22
Zm00001d039916 (GRMZM2G169182)
-1.18 -2.03 -0.07 1.85 0.54 -0.09 -0.2 -0.16 -1.14 -0.8 -1.72 0.16 0.16 1.61 0.2 0.14 -0.26 -0.04 -0.63 -7.45 -0.74 -0.49 0.43 -0.03 -0.63 0.34 0.15 -0.2 0.06 0.71 -0.78 -0.46 -0.29 -0.35 -0.93 0.29 0.5
- - - - -0.92 -3.03 -0.56 -1.14 0.54 2.77 -0.04 2.71 - - 1.64 -3.55 -5.13 -1.66 -2.32 -6.06 - - - - -2.37 -1.53 -0.9 -1.11 - - 2.56 - - 0.2 -3.55 0.63 2.44
Zm00001d041201 (GRMZM2G062613)
-3.49 -2.07 -0.89 -0.1 1.03 -1.38 -2.13 -2.05 -0.5 -0.01 -0.78 0.83 -0.82 1.67 0.51 -0.1 -0.56 -0.26 -1.61 -10.85 -0.25 -1.57 0.66 -1.02 -0.19 1.67 0.55 -0.69 0.42 0.84 0.39 -4.71 -1.74 0.54 1.19 0.63 -0.24
-1.16 -3.66 0.59 0.88 0.79 1.6 0.16 0.27 -0.35 -0.59 -0.14 1.85 -1.17 1.11 -0.13 0.49 -1.99 -1.56 -2.24 -6.63 -0.38 -1.48 2.48 -0.32 -1.36 -0.66 -0.77 -2.42 -2.73 -0.79 -3.12 -3.63 -4.51 -3.53 -1.7 0.51 1.15
Zm00001d042808 (GRMZM2G128918)
-0.02 -1.47 -0.46 0.06 0.31 0.13 -0.5 0.06 -0.63 -0.58 0.35 0.57 0.11 0.82 0.04 0.17 -0.89 -0.3 -0.82 -4.34 -0.27 0.15 -0.84 -1.32 0.08 0.03 0.22 0.38 1.18 0.67 -0.08 0.75 -0.38 -0.29 -0.01 0.04 0.29
Zm00001d043519 (GRMZM5G815165)
-0.16 -0.89 0.63 -0.46 1.75 -0.03 -0.09 -0.81 0.39 0.7 0.1 0.73 -1.82 -1.57 0.75 -0.08 -1.41 0.51 0.94 -8.18 -1.04 -1.47 0.6 -1.05 -0.84 -0.78 -0.07 -1.09 0.92 -0.78 -0.42 -1.15 -2.31 -0.66 0.43 1.16 0.37
Zm00001d044451 (GRMZM2G034536)
-0.35 -0.84 0.91 1.6 0.89 -0.86 -1.43 -1.03 -0.41 -0.15 -0.35 0.53 -0.03 0.39 0.23 0.42 -0.59 -0.07 0.22 -3.21 -0.97 -0.16 1.18 -0.93 -0.27 1.14 0.06 -0.46 0.57 0.07 -0.86 -0.6 -3.34 -0.5 -0.86 0.22 -0.67
Zm00001d046148 (GRMZM2G021879)
-1.63 -4.37 -0.93 0.93 0.93 1.22 0.39 0.27 0.43 0.49 0.55 1.53 -0.64 1.45 0.79 0.7 -1.84 -1.07 -2.2 -5.71 -0.55 -1.86 0.33 -1.28 -1.56 -1.36 -1.07 -1.35 0.67 0.34 -2.38 0.65 -2.73 -2.12 -2.79 0.57 0.81
Zm00001d046378 (GRMZM2G009335)
-0.92 -1.63 0.75 0.52 0.84 0.78 0.64 0.0 -0.13 0.38 0.36 0.71 0.78 1.45 0.39 0.41 -1.32 -0.13 -1.67 -9.02 -1.9 -1.69 0.81 -1.92 -0.31 -0.14 0.58 -0.59 0.8 -0.32 -1.46 -2.69 -3.81 -0.45 -2.22 0.79 -0.27
Zm00001d046499 (GRMZM2G058336)
-2.61 -2.51 -0.93 -0.16 -0.38 -0.27 -0.34 -0.03 -0.54 -0.43 0.25 0.8 0.18 0.35 0.13 -0.2 0.15 -0.44 -0.64 -6.0 0.31 -0.23 -0.11 0.7 -0.02 0.14 -0.49 -0.41 1.26 1.49 -0.79 1.0 -1.41 -0.74 0.93 -0.11 -0.24
Zm00001d046716 (GRMZM2G092493)
0.48 -2.18 0.07 0.76 1.15 0.1 -0.21 -0.19 -0.94 -0.99 0.61 0.59 -0.81 0.6 -0.03 0.24 0.31 -0.42 -0.33 -5.98 0.16 -0.7 -0.01 -0.11 -0.25 -0.91 -1.2 -0.21 0.32 1.35 -0.33 -2.18 -0.88 -0.09 -1.79 0.63 1.04
Zm00001d047335 (GRMZM2G113866)
-2.45 -4.38 0.27 0.89 0.88 0.37 -0.03 -0.46 -0.37 0.08 -0.12 1.22 -1.72 0.12 0.55 -0.79 0.12 -0.27 0.37 -6.12 0.86 0.43 0.97 0.71 -0.25 -0.51 -1.18 -0.26 1.35 -1.09 -0.39 -0.2 -2.19 -1.83 -3.36 0.3 0.11
Zm00001d048431 (GRMZM2G115674)
-1.32 -1.13 -0.2 0.25 -0.24 0.75 0.34 0.11 -0.98 -0.38 -1.24 0.07 0.27 1.12 -0.39 0.56 0.65 -0.14 -0.3 -7.17 0.34 0.11 -0.16 0.48 -0.45 -0.35 -0.26 -0.29 -1.71 1.67 0.23 -1.9 -1.64 -0.52 -0.93 0.5 0.89
- - - - -2.07 -2.82 - - -2.26 -2.08 1.49 4.24 - - 3.31 -6.14 - - - - - - -1.22 - -0.6 - - -1.95 - - - - - -0.24 - 1.2 -
Zm00001d050886 (GRMZM2G312806)
-1.9 -0.86 -0.18 0.72 -0.4 -0.46 -0.93 0.45 -0.3 -0.39 -2.89 0.73 0.23 0.33 0.28 -0.42 0.72 -0.22 0.74 -1.49 0.06 -0.14 0.35 0.58 -0.66 -0.42 -0.09 0.0 -0.8 1.13 0.12 0.69 -0.46 -0.64 0.56 0.07 -0.75
-0.96 -1.02 -3.07 -1.63 -1.2 -4.44 -6.16 -0.49 -0.24 -0.65 -2.28 2.97 0.88 0.03 1.88 -0.74 -3.23 -0.69 -1.35 - -0.96 -1.84 -3.42 0.42 -0.32 0.85 0.78 -0.28 - 0.7 1.08 -1.19 -2.15 -0.53 -0.83 0.53 1.06
0.23 -0.06 1.07 1.13 0.87 -1.13 -1.83 -1.21 -0.78 -0.86 -0.35 0.33 0.24 0.39 -0.42 0.27 -0.25 0.26 0.33 -2.55 -0.57 -0.83 -0.55 -0.54 -0.72 -0.04 -0.26 0.25 1.56 0.64 -0.57 -0.08 -0.64 0.49 -1.02 0.09 -0.84
Zm00001d052303 (GRMZM2G059669)
0.5 0.08 0.04 0.59 0.21 -0.94 -2.1 -0.06 -0.16 -0.38 -2.96 -0.19 0.76 -0.16 0.16 0.47 0.73 0.63 -0.2 -2.39 0.79 -0.08 -0.37 0.52 -0.42 -0.61 0.06 0.08 -1.9 0.52 -0.98 1.01 -0.81 -2.05 0.94 0.07 -0.5
Zm00001d052561 (GRMZM2G011173)
0.72 -0.39 1.12 0.09 0.38 -0.81 -0.95 -1.12 -0.19 -0.14 -3.36 0.68 0.13 -0.56 -0.03 0.02 -0.43 0.59 -0.28 -7.02 -0.46 -1.15 -0.23 0.13 -0.63 0.7 -0.13 0.95 -0.59 1.54 -0.6 -0.94 -0.49 -0.79 0.2 0.46 0.46

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.