Heatmap: Cluster_258 (HCCA cluster)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Root (elongation zone)
Root (meristematic zone)
Root (stele)
Root (tip)
Root
Leaf (3rd leaf of seedling)
Leaf (3rd leaf)
Leaf (apex)
Leaf (bundle sheath)
Leaf (mesophyll)
Leaf (Seedling)
Leaf
Internode
Stalks
Shoot
Shoot (apex)
Tassels (primordia)
Tassels
Anther
Pollen
Ear (immature)
Ear (inflorescence)
Ear (leaf)
Ear (primordia)
Ear
Silks
Kernels (germinating)
Kernels
Maternal transfer zone
Nucellus
Embryo
Endosperm (transfer layer)
Endosperm
Seeds
Coleoptyle (5 day)
Seedling
Whole Plant
Zm00001d002358 (GRMZM5G870342)
-2.1 -0.79 -1.6 -0.43 -0.83 1.19 -0.65 -0.16 1.83 2.09 0.17 0.79 -0.84 -1.13 0.74 -1.3 0.21 -0.85 -0.03 -8.74 -0.55 -0.43 -0.06 -0.69 -0.61 -0.36 -0.63 -1.46 -2.46 -0.54 0.1 -3.89 -2.13 -1.33 1.59 1.05 0.17
Zm00001d002789 (GRMZM2G076950)
-5.8 -3.06 -4.46 -3.1 -4.11 0.8 0.71 0.51 2.27 1.99 1.36 1.34 -1.61 -2.18 1.56 -3.5 -2.48 -1.4 -0.94 -9.0 -3.29 -4.82 0.85 -2.29 -1.92 -1.33 -1.22 -1.59 - -3.3 -3.04 -3.09 -2.24 -2.93 2.24 1.71 0.04
Zm00001d003913 (GRMZM5G898735)
-2.14 -1.9 -1.22 -1.02 -1.55 1.01 0.8 -0.55 1.88 1.8 0.28 1.21 -0.66 -0.64 1.26 -0.91 -1.29 -0.86 -0.23 -7.19 -1.45 -2.57 1.08 -1.34 -0.6 -0.34 -0.93 -1.27 -1.82 -0.04 -1.58 -0.95 -2.3 -1.49 1.31 1.27 0.16
-5.49 -3.82 -2.77 -2.6 -3.41 1.28 0.82 0.76 2.02 2.37 1.32 1.49 -2.22 -1.98 1.3 -2.51 -1.82 -1.22 -1.19 -7.02 -2.72 -2.79 1.57 -2.03 -0.52 -1.11 -1.79 -2.83 - -1.29 -2.96 -4.84 -3.77 -2.88 1.21 1.29 0.26
-2.13 -0.57 -1.55 -0.71 -1.45 0.57 0.56 0.7 1.62 1.91 0.39 1.11 -0.25 -1.03 0.78 -0.92 -0.99 -0.62 -0.15 -5.31 -1.62 -1.17 0.97 -1.07 -0.85 -0.17 -0.67 -0.46 -3.4 -0.62 -1.06 -2.54 -0.73 -1.06 1.51 0.88 0.14
Zm00001d008203 (GRMZM2G039396)
-2.19 -0.9 -1.5 -1.91 -1.67 1.07 0.49 -0.34 2.27 2.26 0.34 0.81 -0.72 -0.7 0.94 -0.51 -0.2 -0.41 -0.54 -6.24 -0.96 -1.46 -0.87 -0.93 -0.65 -0.7 -0.74 -1.61 -3.19 -0.42 -1.13 -4.12 -2.12 -1.44 0.77 1.66 0.31
Zm00001d008228 (GRMZM2G157007)
-5.04 -3.19 -4.23 -2.75 -4.45 1.67 1.47 0.59 1.85 1.94 0.1 1.63 -1.3 -1.09 1.69 -3.03 -3.13 -1.89 -1.58 -6.58 -2.88 -3.47 1.66 -2.5 -1.49 -0.33 -2.07 -3.96 -3.1 -2.47 -3.2 -5.45 -5.06 -4.61 1.62 1.39 0.5
Zm00001d010336 (GRMZM2G089308)
-4.03 -2.98 -2.82 -2.16 -2.73 1.25 1.15 0.49 1.87 1.85 0.43 1.5 -1.3 -0.2 0.95 -0.82 -1.28 -0.71 -0.21 -2.87 -0.8 -1.26 0.57 -2.04 0.02 -1.02 -1.62 -1.84 -2.76 -0.93 -1.19 -7.87 -2.93 -2.79 1.89 1.12 -0.06
Zm00001d011104 (GRMZM2G076544)
-2.46 -0.57 -1.45 -1.12 -1.32 0.52 0.32 0.33 1.09 1.0 -0.77 0.85 -0.59 -1.54 0.37 -0.98 0.13 -0.32 0.12 -6.56 -0.59 0.18 1.26 -0.05 -0.07 -0.6 -0.42 -0.29 -2.18 0.42 -0.67 -2.47 -0.35 -0.29 1.92 0.59 0.03
Zm00001d011993 (GRMZM2G145496)
-5.17 -4.19 -1.59 -2.55 -2.94 1.92 1.26 1.28 1.74 1.77 0.92 1.74 -1.96 -2.13 1.37 -1.46 -3.3 -2.53 -1.81 -10.43 -3.03 -3.17 0.48 -4.72 -1.46 -0.89 -2.13 -3.08 -2.33 -2.79 -2.03 -4.12 -4.03 -3.55 2.03 1.29 0.53
Zm00001d012178 (GRMZM2G080816)
-5.08 -3.08 -1.78 -3.39 -2.29 0.98 0.78 0.49 1.79 1.91 -0.28 0.93 -1.1 -1.08 1.38 -0.99 -1.07 -0.86 -0.1 -4.38 -0.82 -1.04 -0.18 -0.47 -0.49 -0.84 -1.16 -0.87 -3.01 -0.21 -0.91 -2.11 -1.46 -1.4 1.91 1.45 0.33
Zm00001d013861 (GRMZM2G161506)
-3.78 -1.49 -1.75 -1.52 -1.62 0.93 0.42 0.49 1.6 1.59 0.71 1.26 0.15 -0.77 1.52 -0.97 -0.24 -1.0 -0.44 -8.59 -0.45 -0.66 0.2 -0.97 -0.19 -0.34 -1.47 -1.72 -1.4 -0.29 -1.52 -3.27 -2.62 -2.11 1.35 1.11 0.7
Zm00001d014488 (GRMZM2G463913)
-5.84 -4.66 -3.98 -3.55 -4.36 0.98 1.06 0.42 2.12 2.31 0.25 1.08 -2.57 -1.74 1.88 -3.31 -2.88 -1.86 -1.23 -8.9 -3.22 -2.99 0.12 -3.58 -1.88 -1.95 -2.23 -2.9 -5.26 -1.81 -2.52 -4.9 -2.83 -3.19 2.79 1.33 0.21
-1.44 -1.01 -1.41 -1.1 -1.02 0.96 0.75 -0.21 1.75 1.7 -0.07 0.75 -0.48 -0.66 0.94 -0.68 -0.92 -0.28 0.11 -6.64 -1.19 -0.42 0.93 -1.29 -0.12 -0.46 -0.21 -0.73 -2.73 0.23 -0.56 -3.87 -1.69 -1.01 1.1 0.96 0.17
Zm00001d015366 (GRMZM2G026117)
-1.32 -1.24 -2.0 -1.45 -1.89 0.17 0.06 -0.55 2.49 2.38 -0.52 1.09 -0.34 -1.56 1.7 -1.54 -1.17 -0.5 -0.31 -5.22 -1.69 -1.03 -0.12 -1.69 -0.79 -0.53 -0.67 -2.69 -6.54 -1.77 -2.21 -4.78 -2.88 -2.56 1.55 1.66 0.06
Zm00001d015705 (GRMZM2G015033)
-3.72 -2.26 -1.54 -1.53 -1.76 1.09 0.97 0.94 1.45 1.33 -0.28 1.22 -0.76 -0.52 1.11 -1.01 -1.08 -1.15 -0.77 -8.44 -1.46 -2.62 0.97 -1.38 -1.08 -0.62 -0.77 -0.74 -1.45 -0.33 -1.47 -0.74 -1.0 -1.55 1.97 1.2 0.58
Zm00001d016072 (GRMZM2G018403)
-5.91 -4.55 -3.68 -2.75 -3.65 1.54 1.31 -0.01 2.29 2.24 -0.02 1.22 -1.49 -2.14 1.66 -2.85 -3.63 -1.94 -1.86 -8.88 -3.4 -4.57 0.45 -3.76 -1.13 -0.57 -1.83 -3.33 - -3.01 -3.04 -6.76 -4.5 -3.93 2.39 1.19 0.87
Zm00001d017097 (GRMZM2G173501)
-5.06 -5.35 -3.83 -3.33 -3.92 0.83 1.11 -0.23 2.16 2.25 0.65 1.11 -2.44 -1.2 1.17 -1.34 -1.19 -1.5 -0.85 -10.01 -0.68 -1.85 0.15 -2.22 -0.43 -1.45 -1.28 -2.84 - -1.12 -1.6 -4.67 -3.49 -3.33 2.19 1.56 0.94
Zm00001d018838 (GRMZM2G032266)
- - -7.82 - -8.41 1.42 1.06 -0.04 1.92 1.8 0.79 1.14 -4.37 -1.72 1.16 -3.56 -2.81 -1.48 -1.85 -8.05 -4.58 -4.53 0.59 -7.92 -1.59 -0.28 -2.34 -2.48 - -4.01 -5.26 -1.37 -1.68 -1.9 3.06 1.4 0.52
Zm00001d019218 (GRMZM2G063258)
-1.64 0.49 -1.44 -0.24 -1.24 0.98 0.86 0.39 1.34 1.48 0.17 0.93 -0.63 -0.79 1.13 -1.18 0.4 -0.07 0.19 -0.95 -1.25 -2.4 0.92 -0.46 -0.35 -1.95 -0.67 -1.75 - -1.12 -2.83 - -2.62 -2.33 1.2 1.11 0.85
Zm00001d019648 (GRMZM2G011129)
-3.66 -2.87 -2.71 -2.65 -2.88 1.37 1.04 0.96 1.96 2.05 -0.25 1.58 -0.66 -2.12 1.33 -1.77 -1.48 -1.22 -0.78 -3.35 -1.84 -0.99 -0.27 -2.0 -0.92 -1.25 -1.43 -2.32 - -2.91 -1.62 -6.81 -2.77 -3.51 2.21 1.33 0.59
Zm00001d019898 (GRMZM2G143870)
-6.43 -3.37 -4.62 -3.3 -4.46 1.13 0.72 -0.09 2.35 2.17 0.02 1.41 -2.06 -1.99 2.05 -2.67 -2.73 -1.38 -1.1 -10.15 -3.05 -3.93 1.41 -3.43 -1.41 -1.32 -1.33 -3.85 -5.34 -2.64 -2.99 -8.18 -4.7 -4.65 2.11 1.51 0.14
Zm00001d020971 (GRMZM2G004583)
-4.3 -2.2 -1.81 -2.22 -2.43 1.37 1.83 0.63 1.89 1.8 0.76 1.25 -1.03 -0.84 1.11 -1.17 -0.89 -1.2 -1.06 -9.51 -1.62 -1.18 0.75 -0.98 -0.47 -1.29 -1.07 -1.2 -2.91 -0.89 -1.83 -5.18 -2.41 -1.58 1.21 1.15 -0.03
Zm00001d025616 (GRMZM2G361569)
-6.8 -4.68 -4.79 -3.45 -4.14 1.08 0.83 0.35 2.13 2.2 0.2 1.53 -1.44 -0.41 1.78 -2.3 -2.09 -1.69 -1.6 -10.45 -1.59 -1.06 0.17 -2.66 -0.97 -1.96 -2.42 -2.66 -4.9 -2.99 -2.77 -5.7 -2.33 -2.82 2.3 1.37 0.67
Zm00001d027363 (GRMZM2G044247)
-8.06 - -3.81 -6.29 -6.28 2.16 1.3 -0.01 2.57 2.36 -0.67 0.94 -4.56 -3.61 1.97 -5.33 -6.15 -0.76 -1.1 -7.6 -4.38 -4.4 -0.76 -6.63 -2.66 -1.61 -3.06 -4.37 - - -5.98 - -6.46 -5.07 2.12 1.68 0.33
Zm00001d027451 (GRMZM2G176521)
- -5.33 -1.91 -3.32 -3.25 0.8 0.27 -2.01 2.39 2.19 0.83 1.48 -2.32 -0.87 1.86 -1.06 -1.31 -0.28 -0.41 -8.37 -3.08 -3.34 -0.37 -2.94 -1.21 -1.24 -1.01 -1.59 - -0.67 -1.24 -5.22 -1.82 -1.42 1.59 1.84 -0.1
Zm00001d028153 (GRMZM2G047513)
-5.28 -4.47 -3.15 -2.63 -3.02 1.37 1.3 0.6 2.33 2.34 -0.0 1.68 -1.06 -1.73 1.59 -2.14 -1.83 -1.32 -0.34 -8.56 -1.78 -2.99 -0.09 -2.71 -0.86 -0.78 -1.35 -2.5 -4.55 -1.95 -3.24 -4.79 -3.09 -3.47 0.79 1.53 0.74
Zm00001d028221 (GRMZM2G128665)
-5.83 -3.26 -3.61 -2.71 -3.65 1.12 1.2 1.13 1.64 1.93 1.13 1.59 -0.75 -0.45 1.35 -1.75 -1.12 -1.1 -0.97 - -1.14 -1.34 0.47 -0.56 -0.41 -0.86 -1.97 -2.18 -3.1 -0.54 -3.33 - -3.66 -2.78 1.56 1.27 -0.04
Zm00001d028240 (GRMZM2G164965)
-7.05 -3.95 -4.87 -3.61 -4.9 1.38 1.06 0.72 1.83 1.81 0.41 1.45 -1.67 -2.55 1.16 -2.95 -2.2 -1.5 -0.84 -10.17 -2.21 -2.55 -0.11 -2.94 -1.39 -1.97 -2.4 -2.35 -5.13 -2.44 -2.75 -5.22 -2.43 -3.32 3.09 1.25 0.4
Zm00001d029074 (GRMZM2G044074)
-1.76 -1.68 -2.49 -1.69 -1.85 0.76 0.15 -1.26 2.71 2.93 0.06 0.83 -1.31 -1.98 1.27 -2.16 -2.37 -1.25 -1.13 -7.54 -3.08 -2.86 0.4 -2.56 -1.78 -0.75 -1.55 -2.78 -4.07 -1.57 -2.55 -4.57 -3.0 -2.74 1.76 1.46 -0.08
Zm00001d030109 (GRMZM2G089147)
-5.72 -3.33 -1.99 -2.27 -1.94 0.75 0.5 -0.01 1.91 1.87 0.63 1.26 -2.79 -1.04 1.28 -1.05 -0.89 -1.04 -0.51 -9.91 -1.2 -1.58 0.26 -1.63 -0.72 -0.53 -0.62 -2.48 -3.27 -3.05 -1.04 -5.59 -2.97 -2.54 2.62 1.28 0.48
Zm00001d030624 (GRMZM2G432850)
-2.71 -2.55 -1.01 0.0 -1.01 0.8 0.53 0.17 1.33 1.57 0.47 0.89 -0.65 -0.3 0.81 -0.79 0.05 -0.21 -0.14 -8.2 -1.02 -0.52 0.04 -0.53 0.07 0.02 -0.3 -0.47 -3.77 0.39 -0.74 -3.74 -1.16 -0.76 0.4 1.28 0.77
-6.13 -3.71 -3.66 -3.14 -3.26 0.63 0.51 0.09 2.37 2.17 0.23 1.28 -1.34 -1.48 1.8 -1.95 -1.77 -0.99 -1.57 -9.19 -2.76 -1.84 1.12 -3.22 -0.81 -1.09 -2.07 -1.7 -1.83 -2.41 -1.74 -4.27 -2.33 -2.33 2.11 1.44 0.18
Zm00001d031908 (GRMZM2G106928)
-1.18 -0.39 -1.1 0.15 -0.67 0.82 0.51 0.07 2.17 2.28 -1.02 0.68 -0.52 -0.13 0.8 -0.68 -0.78 -0.58 -0.26 -7.99 -0.5 -0.94 -1.29 -0.7 -0.12 0.27 -1.41 -0.79 -4.53 -0.21 -1.31 -4.05 -1.16 -1.52 0.27 1.04 0.15
Zm00001d031969 (GRMZM2G158462)
-4.86 -1.65 -3.16 -1.16 -2.79 -0.17 -0.4 0.64 2.04 2.06 -0.25 1.23 -0.88 -2.88 1.78 -2.14 -0.24 -0.84 -0.61 -8.84 -0.44 -0.16 0.93 -0.68 -0.35 -1.53 -0.99 -1.7 -3.14 -0.93 -0.79 -4.8 -1.84 -1.9 2.06 1.03 -0.39
Zm00001d034020 (GRMZM2G099907)
-2.25 -1.65 -2.38 -2.25 -2.39 0.74 1.13 0.2 1.93 1.73 -0.06 1.48 0.13 -0.98 1.35 -1.19 -1.32 -1.44 -0.95 -8.99 -1.1 -2.39 0.5 -1.76 -1.19 -0.81 -0.4 -1.39 1.25 -2.01 -2.4 -3.7 -1.71 -2.69 1.64 1.08 0.02
Zm00001d034486 (GRMZM2G311961)
-5.41 -2.39 -1.86 -3.31 -2.36 0.53 0.32 -0.2 1.93 1.89 1.28 1.19 -1.58 -2.64 0.98 -1.29 -0.74 -0.96 -0.47 -6.66 -2.01 -1.95 1.34 -1.13 -0.35 -0.95 -0.45 -2.45 - -0.89 -1.06 -7.8 -3.26 -1.72 2.35 1.5 -0.63
Zm00001d035761 (GRMZM2G087570)
-1.79 -0.67 -1.43 -0.68 -1.45 0.92 1.52 0.11 1.58 1.66 -0.08 0.97 -1.25 -1.12 0.82 -1.27 -1.42 -0.83 -0.44 -5.65 -1.74 -1.26 1.21 -1.35 -0.89 -0.54 -0.29 -1.14 -2.44 -0.69 -1.02 -3.21 -1.35 -1.45 2.05 0.86 0.07
Zm00001d038547 (GRMZM2G116258)
-2.33 -1.35 -1.61 -1.31 -1.46 0.43 -0.06 -0.23 2.07 2.05 0.66 1.34 0.05 -0.87 1.51 -1.31 -1.29 -0.41 0.16 -8.29 -1.09 -0.21 0.09 -1.58 -0.0 -2.23 -0.78 -1.36 -2.93 -1.17 -2.17 -3.78 -1.91 -1.65 1.22 1.4 0.34
Zm00001d039448 (GRMZM2G133314)
-11.66 -7.59 -8.74 - -9.2 1.68 1.05 0.59 2.09 2.18 0.75 1.15 -4.2 -1.56 1.63 -5.02 -6.12 -1.89 -2.07 -10.72 -5.49 - 1.58 -10.74 -2.39 -0.95 -3.68 -6.51 - -6.94 - - -7.42 -7.59 2.34 1.61 0.62
Zm00001d039456 (GRMZM2G050845)
-3.39 -1.81 -1.39 -0.55 -1.8 1.1 1.17 0.67 1.37 1.57 1.16 1.46 -1.32 -1.08 1.15 -1.72 -1.07 -0.84 -0.24 -8.7 -2.6 -2.64 0.63 -1.36 -0.86 -0.55 -1.32 -1.53 -2.67 0.28 -1.44 -5.0 -1.64 -1.31 1.76 1.16 0.14
Zm00001d040665 (GRMZM2G080450)
-2.38 -1.23 -0.33 -0.71 -0.72 1.19 0.8 0.04 1.6 1.56 0.11 0.57 -0.15 -1.14 0.92 -0.55 0.81 -0.17 -0.16 -7.08 -1.14 -0.89 -0.48 -0.24 -0.21 0.45 -1.18 -0.62 - -0.07 -1.24 -6.22 -1.37 -1.67 0.25 1.44 0.51
Zm00001d047462 (GRMZM2G170870)
-5.95 -4.94 -3.32 -1.49 -3.75 0.93 1.34 0.63 2.04 2.09 0.4 1.28 -1.44 -1.47 1.28 -2.42 -1.57 -1.41 -1.33 -6.34 -1.75 -1.61 0.63 -2.6 -0.61 -0.68 -1.68 -2.35 -5.53 -2.26 -2.61 -4.93 -2.19 -2.93 2.41 1.26 0.34
Zm00001d048531 (GRMZM2G113267)
-4.03 -2.54 -1.17 -1.83 -1.77 0.92 0.37 0.49 1.41 1.47 0.66 1.0 -1.13 -0.78 1.15 -0.76 0.18 0.09 0.02 -2.15 -0.57 -0.29 -0.39 -0.66 -0.57 -0.3 -0.56 -0.58 -2.13 0.17 -1.58 -2.19 -0.67 -0.74 1.34 1.14 0.36
Zm00001d049203 (GRMZM2G131332)
-4.79 -1.93 -2.96 -0.7 -2.49 1.05 0.79 0.33 1.92 2.0 1.61 1.42 -0.96 -2.14 1.49 -1.2 -1.02 -0.87 0.33 -8.88 -2.29 -2.23 0.06 -1.29 -0.71 -1.15 -1.85 -2.29 - -0.37 -2.03 - -3.41 -2.87 1.58 1.15 0.06
Zm00001d049965 (GRMZM2G123234)
-4.23 -2.01 -3.11 -1.86 -2.8 0.71 1.2 0.24 1.7 1.7 0.11 1.24 -0.57 -2.13 1.62 -2.09 -0.56 -0.87 -0.35 -9.18 -0.85 -0.2 1.11 -0.75 -0.23 -0.88 -0.9 -2.43 -3.46 -0.92 -1.98 -5.98 -3.06 -2.64 2.13 1.05 -0.05
Zm00001d050666 (GRMZM2G139680)
-2.09 -1.16 -1.54 -1.36 -1.61 -0.08 -0.42 -0.17 1.55 1.44 -1.13 0.97 0.62 -0.85 1.24 -0.62 0.02 -0.24 0.6 -7.69 0.03 0.6 -1.24 -0.21 0.27 0.15 -0.46 -0.25 -3.51 0.23 -0.33 -4.33 -0.74 -1.15 1.02 1.15 0.01
Zm00001d050969 (GRMZM2G407996)
-5.31 -3.65 -2.87 -2.78 -3.06 1.58 1.48 1.09 1.99 2.04 0.74 1.79 -1.47 -1.99 1.62 -2.72 -2.58 -1.38 -0.93 -9.72 -2.8 -2.88 0.82 -2.75 -0.97 -1.47 -1.84 -2.38 -4.44 -2.53 -3.27 -4.23 -2.43 -2.87 1.24 1.36 0.4
Zm00001d051807 (GRMZM2G168378)
-4.0 -2.3 -2.21 -2.18 -2.96 0.63 0.98 0.49 1.71 1.98 1.21 1.41 -0.5 -1.15 1.64 -1.36 -1.36 -0.84 -0.52 -9.09 -2.12 -1.67 -0.51 -1.27 -0.8 0.01 -1.01 -1.55 -0.99 -1.08 -0.89 -2.43 -1.45 -0.94 1.43 1.33 -0.2
Zm00001d052630 (GRMZM2G423831)
-6.82 -4.47 -6.2 -5.47 -5.32 1.36 0.9 0.23 2.07 2.03 1.06 1.61 -1.8 -1.95 1.7 -2.61 -2.87 -0.66 -0.44 -8.96 -2.15 -2.97 0.6 -3.91 -0.98 -0.56 -1.06 -3.67 - -1.44 -2.32 - -4.84 -3.88 1.87 1.57 0.51

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.