Heatmap: Cluster_147 (HCCA cluster)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Root (elongation zone)
Root (meristematic zone)
Root (stele)
Root (tip)
Root
Leaf (3rd leaf of seedling)
Leaf (3rd leaf)
Leaf (apex)
Leaf (bundle sheath)
Leaf (mesophyll)
Leaf (Seedling)
Leaf
Internode
Stalks
Shoot
Shoot (apex)
Tassels (primordia)
Tassels
Anther
Pollen
Ear (immature)
Ear (inflorescence)
Ear (leaf)
Ear (primordia)
Ear
Silks
Kernels (germinating)
Kernels
Maternal transfer zone
Nucellus
Embryo
Endosperm (transfer layer)
Endosperm
Seeds
Coleoptyle (5 day)
Seedling
Whole Plant
- - - 2.68 -1.33 1.72 -4.83 -0.87 - - -0.98 -2.41 - - -1.43 -1.64 1.79 -2.98 -0.41 -1.25 -3.3 1.32 1.25 -5.75 -1.66 -2.36 - -2.86 - 2.72 0.06 - -4.94 - 1.77 0.3 1.11
Zm00001d003163 (GRMZM2G323672)
- - -3.93 1.93 -1.85 - -4.78 - - - - -3.27 - - -2.34 0.71 -2.7 - 0.89 -4.34 0.89 2.32 - -1.81 -2.49 -3.48 -4.08 -0.01 2.54 - - - -3.03 - 3.77 -4.55 -0.48
- - - 2.1 -2.27 1.2 0.67 - - - -1.28 -2.0 - - -1.89 -0.85 1.67 -3.14 -0.13 -3.23 1.62 1.34 - -3.2 -2.6 0.43 - -2.67 - 3.32 -1.36 - -5.71 - -2.96 0.18 1.91
-1.38 - -2.29 - -2.41 -2.6 1.0 - - - - -2.93 1.8 - -2.79 -1.04 -1.89 - -2.47 - -1.17 - - -0.14 -1.79 - - - - - - - -4.49 - 4.77 -2.85 -1.59
- - - - -1.54 - - - - - - - - - - -1.31 3.33 - - - - - - - 0.58 - - -1.14 - - - - -0.63 - 4.54 -1.85 -
Zm00001d004491 (GRMZM2G359974)
2.42 1.0 -0.62 2.57 0.44 - - - - -5.5 - -7.41 - - -0.8 -5.41 - - -9.0 - -5.22 - - -6.0 -8.6 -3.08 1.57 - - - - - -9.65 - 4.12 -1.11 -2.8
- - - 2.82 -1.48 1.37 -3.75 - - - -1.1 -1.34 - - - -0.24 3.38 - 0.33 - -0.82 2.59 - - -3.75 -1.11 - -1.15 - -1.01 -0.67 - -1.94 - 1.99 -0.74 -
Zm00001d005700 (GRMZM2G557799)
- - - - -2.74 - 0.28 - - - - -1.6 - - - -4.89 -0.05 - - - - - - -0.46 0.72 1.55 - - - - - - - - 4.83 -0.8 -
- - -2.01 - -0.59 -2.48 - -5.78 - - - -3.02 - 1.86 - 1.23 -1.2 -3.31 -0.2 - 1.63 - - -2.92 -3.81 1.27 -1.02 -0.33 - -2.39 -1.95 - -3.14 - 4.28 -3.47 0.43
- 0.8 -0.16 - -2.38 - - - - - 1.43 -2.51 - 0.31 - -0.53 0.39 - -2.42 -0.36 -1.23 - - 1.79 - - - -3.41 - - - - -0.49 -2.62 4.18 -2.64 2.0
- - - - - - 2.25 - - - - -0.7 - - - -1.43 - - - - - - - - - - - - - - - - - - 4.97 - -
Zm00001d006502 (GRMZM5G895534)
-1.84 -1.15 0.01 -0.66 -1.07 -3.11 -3.66 -1.73 -2.6 -2.85 -0.91 -1.51 0.4 -2.12 -1.62 -0.97 -0.66 -0.71 -0.91 -5.46 -1.65 -1.39 -4.95 0.45 1.66 1.35 0.25 -1.09 0.32 0.35 -0.71 0.17 -1.44 -0.16 3.69 -1.91 -2.81
Zm00001d007505 (GRMZM2G451729)
-2.76 -1.59 -1.77 1.47 -1.11 -3.3 -2.15 -1.43 -4.42 -3.87 -3.53 -1.81 -0.05 -6.42 -2.33 -1.56 1.09 0.87 0.71 -5.39 -1.38 0.48 -0.35 0.44 0.74 0.41 -1.07 -1.91 - 1.17 0.18 -4.53 -0.86 0.05 3.48 -0.96 -1.55
Zm00001d007583 (GRMZM2G128376)
- - - 2.91 -3.26 -1.5 1.02 - - - - -1.05 - - - -2.65 3.89 - -0.45 -2.07 - - - 1.16 -2.73 0.4 - -1.1 - - -1.7 - -1.27 0.59 1.52 0.31 -
Zm00001d009009 (GRMZM2G323893)
- - - 3.28 -1.78 -0.71 -2.6 - - - -4.08 -3.1 - -4.54 -3.23 -3.21 1.91 - 0.25 -4.71 - 0.98 0.07 -4.46 -1.41 -0.26 - -2.33 - 3.15 -3.17 - -3.79 -5.96 2.71 -0.51 -5.61
-0.74 -0.92 -1.13 0.95 1.25 0.89 -2.35 -0.16 -1.01 -2.5 0.47 -0.62 -1.71 - -0.19 -0.69 0.58 -0.07 0.78 - -2.18 -0.17 -0.12 0.88 0.72 1.84 1.75 -1.37 - - -2.46 - -3.87 1.63 -0.85 1.13 -0.8
-6.06 -4.1 - 4.32 -2.76 -0.02 0.97 -2.22 - - -3.72 -0.89 - -3.34 -1.59 -4.06 2.69 -4.85 1.36 -4.54 -5.04 -1.01 - -4.08 -2.91 - - -2.8 - -2.13 -3.95 - -4.25 -6.55 0.11 0.1 -4.29
Zm00001d009931 (GRMZM2G063988)
-1.5 -0.31 -0.32 - -2.0 - - -1.45 - -1.64 - -2.22 -0.05 -1.12 -1.57 -1.56 0.31 -1.8 1.95 - -3.43 - 3.35 - -0.44 - - -3.0 - - -1.89 - -2.6 -3.09 3.83 -1.1 -
- -4.23 - 3.14 -1.11 -1.46 -2.48 - - - -1.0 -3.14 - -0.81 - -1.16 2.94 - 1.07 - -0.21 1.35 - -3.94 -3.08 - - -2.05 - 3.01 -2.05 - -3.49 - 1.14 -0.61 -0.63
- - - 3.86 0.72 1.04 0.37 - - - -1.16 -1.22 - - -4.14 0.26 2.75 - 1.43 -3.33 -2.02 - - -4.26 - 0.25 - -2.51 - - - - -2.27 - -1.03 1.29 -0.03
-6.31 - 1.8 - -0.35 - - 2.1 0.67 -1.55 -4.08 -1.08 -3.35 - -3.11 -1.44 - -2.48 -3.29 - -7.13 -2.39 3.05 - -1.13 -0.97 - -7.31 - - -5.69 - -6.99 -4.07 3.91 -1.65 -2.09
- - -1.62 - 0.4 -2.29 - - - - - -1.19 - - - -2.17 1.69 - -3.03 -3.48 - -0.12 - -3.31 - -0.18 -1.99 -4.58 - 0.1 3.26 - -5.53 - 3.7 2.37 -
Zm00001d012711 (GRMZM2G327427)
- - - - 0.75 0.57 -5.4 0.15 - - - -2.43 - - - -0.1 -3.71 -2.25 -4.45 -4.47 1.46 - -3.44 - - - - 0.8 - -1.65 -0.29 - -1.34 - 4.56 -4.08 0.55
Zm00001d012730 (GRMZM2G455087)
- - - 1.63 -1.47 2.45 - 0.31 - - -1.98 -2.59 - -2.25 -6.89 -2.0 1.99 -4.92 -1.81 - -3.2 2.29 0.43 -4.9 -1.3 -2.01 - -2.5 - 2.76 0.9 - -4.14 - 1.74 0.64 -0.2
- - -3.0 1.65 -0.37 -0.29 -0.61 -1.84 - - 0.16 -0.45 - - -1.53 0.1 2.25 -3.98 1.73 -4.11 -0.77 2.16 0.27 -3.62 -1.04 -1.35 -1.83 -0.41 - 2.8 -1.48 - -0.48 -7.12 -0.04 0.37 0.17
Zm00001d016265 (GRMZM2G349103)
-4.6 - - - -5.0 - -4.4 0.67 - - - -3.25 - - -5.25 -5.56 0.18 -3.02 -3.51 - - - - - -3.32 - -2.67 - - -0.58 -0.68 - - - 5.01 -4.47 -
Zm00001d016303 (GRMZM5G808876)
-2.89 -0.72 0.3 - -1.47 - - - - 0.22 - -3.01 - - - -0.98 -1.75 - -3.03 - - - - 1.38 -1.77 - 2.26 - - - - - -4.33 - 4.62 -3.14 -
- - - - - - - - - - - -4.9 - - - - - - - - - - - - - - - - - - - - - - 5.21 - -
- - - - -1.76 - 0.34 - - - - -0.73 - - - -0.88 - - -0.12 - - - - - - - - - - 3.95 - - - - 4.0 0.92 -
- -1.99 - - -5.59 -0.92 -0.88 -0.41 -1.02 -2.18 - -1.11 -1.14 - -1.0 -4.28 - -0.3 -6.1 -5.55 - - -1.87 -1.9 -2.85 -0.57 - -6.05 - - - - -5.02 - 4.86 -0.95 -0.29
Zm00001d019006 (GRMZM2G135966)
-3.92 - -3.83 1.69 -0.71 0.61 0.94 - - - -1.13 -0.79 - -0.91 -4.56 -0.52 2.53 -3.41 2.0 -5.08 -1.89 -1.15 1.44 -2.51 -2.52 1.81 - -2.37 - 2.06 -0.9 - -3.48 -2.78 1.93 -0.45 -1.47
- - - - - - - - - - - -3.33 - - - -3.77 - 1.12 - - - - - - - - 2.05 - - - - - - - 4.93 - -
Zm00001d019541 (GRMZM5G896560)
- - - - -10.86 -2.71 -2.42 -2.48 -5.91 -4.06 - -1.83 - - -4.04 -5.87 0.17 -0.55 -1.62 - -3.98 -1.56 - -1.84 -0.76 1.09 -5.05 1.18 - -0.32 -1.8 - -4.0 -2.88 4.44 0.68 1.87
Zm00001d020599 (GRMZM2G057569)
-6.84 - - - 1.0 0.65 - 1.43 - - -2.0 -0.64 - - -9.26 -1.08 -2.3 - -0.86 -0.8 -1.11 - - - - 1.55 - -1.41 - -1.04 - - -3.2 - 4.48 0.13 -1.92
- - - - 1.37 -0.82 - -0.61 - - -0.69 -0.39 - - - 0.72 - - -0.55 - - - - - - -3.54 - 0.53 - - -0.52 - -3.09 -2.38 4.56 - 1.76
Zm00001d023907 (GRMZM2G316593)
- - - - -1.51 0.89 - 2.1 - - - -4.83 - - - -2.06 - - -1.71 -4.89 1.06 - - - - - - -1.62 3.09 - 0.35 - -3.16 - 4.1 -5.38 -1.03
- - - 4.27 -2.84 - 0.18 - - - - -3.26 - - - -2.27 3.79 - - - -3.54 - - - -2.38 - - -0.82 - - - - -0.51 - - -0.48 -
Zm00001d024028 (GRMZM2G049892)
-5.9 -4.9 -3.02 -1.67 -1.17 - -3.44 -5.21 - - -3.17 -3.31 -1.14 - -7.17 -2.71 1.27 1.94 0.05 -6.62 -2.94 2.09 0.67 -5.92 1.04 - -2.51 -7.72 - -0.17 -1.25 - -5.16 - 4.14 -0.78 -5.01
Zm00001d024323 (GRMZM2G020254)
-5.56 -5.26 -2.54 -4.12 -1.73 -3.58 -5.13 -2.41 0.77 0.6 -2.95 -0.96 -5.18 -4.84 1.4 -1.77 -2.08 0.51 -2.04 -5.01 -3.96 -2.02 -0.2 -5.14 -2.39 0.96 0.73 0.6 - -2.53 -0.03 - -1.84 1.15 3.92 0.14 -0.19
Zm00001d024330 (GRMZM2G420774)
- - - - -2.75 - - -0.5 - - - -5.58 - - - -2.11 - - -2.29 -0.96 -1.8 - - -0.97 - - - - - - - - - - 5.1 -2.87 -
- - - - -4.89 - - - - - - - - - -1.89 -1.61 0.32 - -1.54 - -2.91 - - -2.85 -0.44 - - -4.04 - - - - - -1.77 5.06 - -
- - - 3.11 -2.15 -0.83 -2.65 -3.25 - - -3.2 -3.78 - -2.11 -2.38 -1.09 1.88 -2.02 0.56 -7.06 -0.82 2.05 1.55 - -1.47 -0.14 -4.19 -4.6 - 2.49 -2.6 - -2.81 -3.94 2.2 -0.23 -1.33
- -0.48 - 2.42 -2.95 - - - - - - -3.68 - - -2.24 -2.33 -0.66 - 0.36 - - 2.32 - - - - - -0.57 - 3.34 -1.17 - - - 3.58 -2.0 -
- - - - -1.02 -1.81 -4.22 - - - - -5.67 - -2.75 - -0.94 - - -4.37 - -5.27 - 0.9 - - - - 1.51 - 3.15 -0.53 -0.75 -3.04 -3.72 4.34 - -
Zm00001d029002 (GRMZM2G010149)
- -2.91 -5.5 -0.29 0.78 -5.08 - 1.23 - - -2.11 -0.9 - -1.0 -9.0 1.39 0.39 -4.81 -0.18 -5.82 - -0.9 - 0.05 -4.7 -1.23 -4.97 -1.39 - - -5.8 - -1.21 - 4.4 -2.14 0.6
Zm00001d029797 (GRMZM2G077530)
- - -5.38 2.61 -1.31 0.26 -0.21 -6.4 - - -4.41 -2.0 - -7.34 -2.52 -3.05 0.48 -5.02 0.54 -7.9 -1.97 0.68 -0.89 -8.68 -1.96 -6.52 -5.31 -2.25 - 2.21 -1.45 - -2.88 -4.34 4.02 -0.79 -3.64
- - - - -1.74 -1.65 - -1.82 - - - -1.32 - - - -0.05 3.82 0.42 2.58 - 0.83 - - -3.06 - - - -3.25 - 2.63 - - 0.07 - 1.83 -1.64 -2.0
Zm00001d030591 (GRMZM2G125052)
-0.94 -2.03 -0.94 -1.1 -1.8 -3.33 -3.11 -6.85 -4.41 - - -3.58 - - -4.34 -2.92 0.42 1.42 -0.01 -1.97 -4.56 -0.37 - -1.76 0.28 - -4.54 -5.97 - -0.03 -0.18 - -6.77 -6.38 4.6 -2.26 -1.4
- - - - -4.42 - - - - - - -2.28 - - - -4.88 -2.34 - -2.99 - - - - -0.64 1.6 - - -2.19 - 1.07 - - -3.06 - 4.92 -4.53 -
Zm00001d031910 (GRMZM2G086119)
- - - 3.73 -3.17 0.57 -2.9 - - - - -3.02 - - - -2.45 3.6 -2.02 -0.21 -4.56 -5.95 1.56 1.24 -4.59 -2.37 - - -6.07 - - -4.0 - - - 0.88 -0.29 -4.0
- - - 2.84 -0.5 1.58 0.52 - - - 1.1 -0.29 - - -1.67 0.19 - - 0.68 -1.09 - - - -2.84 - - - -2.09 - 3.74 -2.18 - - - -5.15 1.15 0.98
Zm00001d034292 (GRMZM2G461332)
-4.82 -7.06 -3.3 2.17 -2.38 1.22 1.5 -0.45 - -7.48 -3.58 -0.11 - - -3.87 -4.65 -0.89 1.42 1.21 -7.86 -8.39 -0.22 0.52 -6.33 -0.15 -2.44 -5.92 -6.33 - -0.16 - - -9.11 -7.26 3.79 0.46 -3.94
- - - - -1.61 - - - - - - -2.02 - - - -1.66 - - -1.2 -1.41 - - - - - - - 0.33 - - - - -2.41 - 5.07 -2.75 -
Zm00001d035210 (GRMZM2G531699)
- - - - 0.65 0.63 - -0.37 - - -0.28 -1.73 - -4.87 -5.88 -0.86 - - -0.42 -5.77 - - 1.74 - -1.52 - - -0.83 -0.06 2.11 1.63 - -2.5 -7.34 4.04 -3.35 0.28
- - - - -3.65 1.97 -1.23 - - - 1.49 -5.07 - - -3.61 -4.48 - - -2.35 -2.94 - - - - - - - - - - -0.39 - - - 4.8 -0.4 -
- -4.34 -6.23 1.66 -2.97 -0.12 -0.2 -1.67 - -5.46 -3.83 -1.73 -3.87 - -3.82 -4.58 1.5 0.54 -1.2 - - 0.09 1.99 -2.83 -0.83 -4.3 - -6.81 - 2.53 -2.26 - -5.92 -4.87 3.76 -0.41 -3.78
Zm00001d036198 (GRMZM2G047308)
- - - 3.76 -2.81 - - - - - - -0.74 - - - -2.68 - - -1.03 - - - - 0.21 - - - -2.13 - - - - - - 4.11 0.72 0.86
Zm00001d039671 (GRMZM2G368134)
- - - 4.23 -4.91 0.32 -1.57 - - - - -3.77 - -1.93 -4.46 -3.01 3.8 -0.99 - -3.44 - - - - -2.54 - - -3.0 - - - - -3.61 - -2.99 0.19 -
- - - - - - - - - - - - - - - 0.33 - - - - - - - 1.13 - - - - - - - - - - 5.07 - -
- - - - -0.34 1.24 - - - - - -3.48 - - - -1.58 - - 1.4 - - - - - - - - 0.38 - - - - - - 4.87 -2.33 -
- -3.54 -3.57 -0.59 -1.35 -2.03 -2.84 - - - - -0.59 - - -0.78 -1.88 0.5 -0.25 -1.01 -6.1 - -0.15 2.71 -1.85 0.34 - -0.13 -6.71 - 0.9 - - -4.68 -2.2 4.23 -1.43 -
Zm00001d041666 (GRMZM2G043623)
- - - 1.56 - - -2.32 - - - - -4.53 - - - -5.28 1.49 1.32 - -0.6 - - - -1.15 - - - - - - - - -2.33 - 4.69 0.39 -
- - - - -0.17 -0.16 -3.53 - - - - -2.6 - - - -1.07 -1.3 - - -1.78 - - - - - - - -1.23 2.74 - -2.7 - - - 4.73 - -
Zm00001d042489 (GRMZM2G176570)
- - -4.67 1.37 -1.38 -0.68 - -3.21 - - - -2.46 - - -4.37 -0.63 - 0.91 -2.25 1.5 0.08 1.1 1.09 -2.95 -2.63 - - -2.47 - 3.04 0.37 - -2.02 -1.06 3.44 -1.93 -1.48
- - - - -4.35 - - - - - - -4.82 - - - -4.26 - - -0.3 -1.28 - - - - -3.41 - - - - - - - - - 5.15 -5.17 -
- - - - -2.4 -0.64 -1.13 -0.29 - - 0.65 -0.57 - - -3.36 -2.1 -4.23 -3.04 0.31 - -5.99 - - - -1.22 0.37 - -2.55 - - -3.73 - -1.52 -6.06 4.82 -2.82 -2.35
- - - - -1.98 - 3.19 - - - - -3.24 - - - -5.67 - - - - - - - - - - - - - - - - - - 4.78 - -
Zm00001d048931 (GRMZM2G424553)
- - - - -5.24 - - - - - - -2.66 - - - -3.19 -3.36 - -1.63 - -3.54 0.29 - -4.53 -4.02 - - -1.86 - - - - - - 5.09 - -0.73
Zm00001d048992 (GRMZM5G834386)
-4.0 -3.2 - 1.39 -0.91 1.48 -1.3 - -0.32 -3.07 - -1.65 - - -2.85 -3.22 1.95 1.77 -1.31 -4.28 -4.65 0.64 2.36 -1.54 0.04 - - -3.18 - - 1.95 - -4.41 - 2.83 -0.09 0.11
Zm00001d049209 (GRMZM2G390207)
- - - - -3.78 0.01 - - - - - -7.75 - - - -4.53 - -0.42 -3.52 - - - - -1.53 -2.48 -0.22 - 0.93 - 1.28 - - 1.32 1.22 4.62 - -
Zm00001d049942 (GRMZM2G135068)
- -6.08 -3.53 3.47 -1.41 -0.49 -0.27 -6.24 - - -1.97 -1.74 - - -1.61 -1.19 2.94 -4.19 1.82 - -0.56 0.56 -0.51 -6.45 -0.78 0.75 -4.94 -3.86 - 1.51 -1.82 -2.17 -2.95 - 0.56 -0.53 -1.33
- - - 3.27 -0.85 1.12 - -0.46 - - - -2.65 - -3.96 - 0.37 -4.39 - 0.21 -2.22 1.75 - - - - - - -1.71 - 2.86 -0.78 - -2.38 - 3.02 -8.68 0.17
- - - 2.96 -1.67 -0.32 0.6 - - - -2.36 -0.92 - 1.33 -6.77 -2.04 3.03 -2.57 0.98 - -3.29 -0.5 -0.44 - -4.39 0.07 - -3.62 - 1.85 0.49 - -3.18 -3.4 1.98 -0.07 -
Zm00001d050515 (GRMZM2G389240)
- - - - -3.35 - - - - - - -3.27 - - - -4.12 - - -1.43 - - - - -0.11 - - - - - - - - - - 5.15 - -
Zm00001d050675 (GRMZM2G323971)
- -2.24 - 3.71 -2.14 - -2.76 - - - - -3.11 - - -2.45 -3.54 2.29 - -3.81 -3.34 -0.83 - - -1.59 -3.63 1.95 - -2.01 - 0.9 - - -4.63 - 3.38 -1.1 -
Zm00001d050808 (GRMZM2G121083)
- - - 2.4 -2.62 -2.8 -3.27 - - - - -4.57 - - - -3.42 1.55 - - -5.08 -3.88 - - - - - - - - 1.8 - - - - 4.6 -1.07 -
Zm00001d051720 (GRMZM2G060073)
- - - - -4.49 - - - 2.3 - - -2.15 - - 0.19 -3.64 - -0.37 -1.72 - - - - - -0.37 - - -1.65 - - - - -1.86 - 4.74 0.48 -
- - - - -1.1 - - 0.58 - - - -1.75 - - 0.46 -1.39 - 1.61 0.09 -1.4 - - - - -0.49 - - 1.28 - - - - 0.29 - 4.5 0.59 -
- - 0.09 - -3.47 -0.34 -0.43 -0.0 - - - -2.11 - - - -1.63 1.78 0.37 0.77 - - - - 2.55 0.99 - - 0.67 - - - - -1.26 -1.21 3.97 -1.61 -
Zm00001d052772 (GRMZM2G164781)
-8.92 - -4.72 - -4.63 -7.7 - -4.84 -5.06 -5.92 - -1.2 -3.27 -1.84 -0.05 -5.29 -11.16 1.17 -2.94 -7.34 -11.32 -9.17 - - -4.08 3.6 1.1 -4.98 - - -2.48 - -8.77 -2.26 4.06 -0.11 -1.79

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.