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View as: (view raw or row-normalized)
View using InCHLib : here ( Experimental feature, still under development)
(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
| Gene | Aerial tissue - Light - ZT1 | Aerial tissue - Light - ZT3 | Aerial tissue - Light - ZT5 | Aerial tissue - Light - ZT7 | Aerial tissue - Light - ZT9 | Aerial tissue - Light - ZT11 | Aerial tissue - Dark - ZT1 | Aerial tissue - Dark - ZT3 | Aerial tissue - Dark - ZT5 | Aerial tissue - Dark - ZT7 | Aerial tissue - Dark - ZT9 | Aerial tissue - Dark - ZT11 | Roots | Root elongation and differentiation zone | Root meristematic zone | Aerial roots and rhizophores | Shoot tips | Microphyll | Strobili | Shoot apical meristem - AC | Shoot apical meristem - Core | Shoot apical meristem - P1 | Stem - Top | Stem - Bottom | Whole plant | Aerial tissue - Stress - Dark | Aerial tissue - Stress - High light | Aerial tissue - Stress - Cont | Aerial tissue - Stress - 37C 1h | Aerial tissue - Stress - 37C 3h | Aerial tissue - Stress - 4C 1h | Aerial tissue - Stress - 4C 3h |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| -1.18 | - | - | - | - | -0.65 | 1.09 | -1.11 | - | 2.42 | - | 0.13 | -0.59 | - | 0.87 | - | 1.0 | - | 0.87 | - | - | 2.48 | -0.77 | -0.78 | - | - | - | 2.53 | 0.85 | 0.3 | - | - | |
| 0.45 | 1.56 | -1.25 | 0.68 | 0.35 | 1.27 | 0.84 | 1.28 | 1.03 | 2.43 | 1.84 | 0.65 | -0.64 | 0.51 | -2.64 | - | - | - | - | -0.6 | - | - | - | - | - | 1.22 | - | - | - | - | - | - | |
| -0.35 | -1.24 | - | -0.26 | 1.04 | -1.96 | 0.64 | -0.04 | -0.6 | 2.54 | -0.09 | 0.88 | - | - | -2.22 | - | - | -1.33 | -0.98 | - | - | - | -1.85 | - | 1.76 | 1.67 | 2.67 | 0.32 | - | - | - | -1.9 | |
| - | - | - | - | - | - | -2.27 | -0.82 | - | 3.27 | - | - | - | - | - | - | 1.63 | 3.52 | -1.44 | - | - | - | - | -2.47 | - | 0.89 | - | - | 0.06 | 0.47 | -0.71 | 0.63 | |
| -1.94 | - | 1.17 | - | - | 0.65 | 0.45 | - | - | 2.64 | - | -0.53 | - | 1.15 | -1.11 | 0.84 | - | -0.37 | 1.61 | - | - | - | - | -0.46 | - | 1.7 | - | 1.82 | -0.38 | 0.62 | 0.58 | - | |
Smo3410 (PEPKR2) | - | - | - | - | - | 1.13 | 0.89 | - | - | 3.87 | - | - | - | - | - | - | - | - | 3.74 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| - | - | - | - | - | - | - | - | 1.94 | 2.64 | - | - | - | 0.3 | 1.32 | 0.45 | 0.42 | 0.97 | 3.29 | - | - | - | - | 0.35 | - | 1.33 | - | - | - | - | - | - | |
| -0.01 | 0.31 | -0.51 | 0.34 | 0.85 | 1.56 | -0.12 | 0.88 | 1.64 | 1.77 | 0.72 | -0.34 | -0.56 | -3.72 | -1.34 | -1.28 | -1.9 | -0.06 | -0.04 | - | - | -0.21 | -0.78 | -1.68 | - | 0.8 | -0.57 | -0.69 | -0.76 | -0.82 | -0.24 | -0.43 | |
Smo404678 (TRS120) | - | - | - | - | - | - | - | - | - | 3.81 | - | - | - | - | 2.94 | - | - | - | - | - | - | - | 3.37 | - | - | - | - | - | - | - | - | - |
| -1.59 | - | -0.22 | 1.81 | - | 0.24 | 1.93 | 0.28 | 1.21 | 2.83 | -0.5 | 1.48 | - | -1.49 | - | - | -0.5 | -1.11 | 0.61 | - | - | - | - | - | 0.66 | -0.28 | 1.02 | - | - | -1.47 | -1.49 | - | |
| -1.84 | -2.51 | - | -0.44 | 1.79 | 1.82 | 2.26 | 1.31 | 0.59 | 2.23 | -0.63 | - | - | - | -1.36 | - | -2.44 | -0.46 | -1.2 | - | - | - | -0.88 | -3.16 | - | -1.01 | 2.03 | 0.6 | -0.91 | -1.53 | -2.0 | -3.2 | |
| 0.41 | - | 1.92 | 1.34 | - | - | - | - | -1.5 | 2.63 | - | -0.07 | 1.3 | - | - | 0.93 | - | -0.79 | 1.76 | -2.34 | - | - | - | - | - | -0.2 | 1.3 | 2.25 | - | - | - | -2.26 | |
| -0.95 | -1.32 | -1.46 | - | 1.58 | - | 0.6 | - | - | 2.68 | -1.25 | - | - | - | -1.81 | - | - | 1.38 | 3.2 | 1.32 | - | - | - | - | - | 1.2 | - | - | 0.11 | 0.54 | - | - | |
| -2.07 | -1.32 | - | 0.07 | -0.05 | -0.03 | 1.96 | 0.04 | -1.19 | 2.21 | 0.19 | -0.27 | -0.92 | - | -0.6 | - | -0.01 | -0.42 | 2.52 | - | - | - | -1.13 | -1.14 | - | - | - | - | -1.07 | 0.52 | -0.1 | 2.0 | |
| -0.99 | -2.2 | 0.73 | -1.77 | -2.16 | 0.17 | -2.23 | -0.42 | -0.55 | 2.38 | -0.5 | -2.27 | - | 0.6 | 0.86 | -0.74 | -0.91 | 0.92 | 2.79 | - | - | - | 0.12 | -1.04 | - | 0.01 | - | 0.19 | 0.02 | 0.03 | -0.43 | -1.09 | |
| 1.63 | 0.06 | 1.17 | - | - | -0.7 | 1.09 | -1.16 | 1.8 | 2.28 | 1.79 | 1.02 | -0.61 | - | - | - | - | - | 2.72 | - | - | - | - | - | - | - | 0.46 | - | - | - | - | - | |
| -1.09 | -0.79 | -0.96 | - | -0.53 | 1.75 | 2.63 | 1.15 | 0.92 | 3.28 | 0.54 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.83 | 1.65 | - | - | - | - | |
| -0.66 | 0.2 | - | -0.04 | 2.2 | 1.99 | 0.8 | 0.61 | 1.13 | 3.21 | 0.95 | 0.18 | - | - | -2.09 | - | - | - | - | - | - | - | - | - | - | -0.21 | - | 0.84 | - | - | - | - | |
Smo411167 (AIR3) | -2.63 | - | - | - | - | 1.29 | 1.55 | 1.13 | 0.52 | 2.53 | -1.4 | - | - | - | - | -0.73 | - | -1.14 | 2.87 | - | - | - | - | - | - | - | 0.31 | 2.72 | - | -1.04 | - | - |
| 0.58 | 0.52 | -0.05 | 0.16 | 0.98 | 1.4 | 0.89 | 0.58 | 1.04 | 1.67 | 0.77 | 0.48 | -2.1 | -2.35 | 0.06 | -1.48 | -0.45 | -1.73 | 0.04 | -3.0 | - | - | -0.89 | 0.25 | -2.24 | -2.43 | 0.19 | -0.73 | -0.51 | -0.21 | -0.54 | -0.89 | |
| 0.08 | - | 0.15 | - | - | - | -0.11 | - | - | 3.52 | 0.83 | -0.09 | - | 1.18 | - | 0.33 | 0.16 | 1.0 | 2.35 | - | - | - | - | - | - | - | - | - | - | 1.04 | - | -0.06 | |
| -1.7 | -1.59 | -2.52 | -0.41 | -1.36 | 0.16 | 0.69 | 1.2 | 1.2 | 1.6 | -0.24 | -0.83 | -0.79 | - | -0.12 | -0.06 | -0.03 | 0.79 | -0.41 | - | 0.24 | - | -0.24 | -1.12 | 1.04 | -0.51 | 0.94 | 0.65 | 0.49 | 0.1 | -0.71 | -0.83 | |
Smo414146 (LIG4) | -0.3 | -1.8 | - | -0.72 | - | 0.32 | -0.25 | 1.01 | - | 3.03 | 0.37 | 1.55 | - | - | -1.35 | - | 1.34 | -0.17 | -1.86 | - | - | - | 0.24 | -0.82 | 0.4 | -0.54 | -0.24 | - | 0.2 | 1.0 | -0.82 | 0.44 |
| -0.83 | 0.16 | - | - | - | 2.29 | 0.25 | 2.89 | 1.7 | 3.45 | 0.23 | - | - | - | - | - | 0.53 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| 0.27 | -1.7 | - | -0.48 | - | 1.39 | -0.07 | -0.85 | -0.45 | 2.87 | -1.71 | -1.67 | - | -1.36 | -0.86 | - | - | 0.29 | 1.2 | - | - | - | 0.01 | 0.54 | 0.51 | 1.43 | 0.87 | 0.68 | -1.51 | -1.37 | 0.81 | - | |
| - | - | -0.31 | - | 0.15 | -1.22 | -0.59 | - | -1.62 | 2.55 | - | -0.1 | - | - | -2.24 | - | - | - | - | - | - | - | - | - | - | 0.65 | - | 4.28 | -1.87 | -1.72 | - | - | |
| -0.03 | -0.17 | -1.33 | -0.47 | -1.06 | 0.64 | - | -1.36 | 1.13 | 2.53 | 1.4 | - | - | - | 0.66 | -0.62 | - | 2.53 | 2.66 | - | - | - | - | - | - | 0.16 | - | - | - | -0.92 | - | - | |
| -0.2 | 0.61 | 0.01 | -2.11 | 1.0 | 1.75 | - | - | -0.39 | 2.06 | -2.55 | -0.51 | -2.3 | -2.47 | 1.2 | -0.63 | 0.03 | - | 0.57 | - | - | - | -1.37 | -0.39 | 0.67 | -1.38 | 1.94 | 0.85 | 0.73 | -1.4 | -1.43 | -2.5 | |
| - | - | - | -0.9 | - | - | - | 1.83 | - | 2.42 | -0.14 | -0.96 | - | -0.65 | -1.56 | -0.66 | -0.81 | 1.19 | 3.27 | - | - | - | 0.14 | -0.88 | - | - | - | 1.39 | 0.69 | -0.8 | -0.84 | - | |
| 0.78 | 0.98 | 0.34 | -1.37 | -0.8 | - | 1.0 | 2.16 | 1.14 | 2.96 | 1.85 | 1.61 | - | -0.08 | -0.16 | - | - | - | - | - | - | - | - | - | - | 0.15 | - | - | - | - | - | - | |
| - | - | - | - | - | - | - | 2.47 | - | 4.55 | - | - | - | - | -0.39 | - | - | - | 0.12 | - | - | - | - | - | - | - | - | - | - | 0.17 | - | - | |
| - | -1.98 | -1.56 | -2.32 | 0.29 | - | 1.38 | - | - | 2.4 | -1.66 | - | -0.1 | -0.44 | 0.61 | 0.59 | 0.98 | 0.23 | -0.9 | - | - | - | -0.14 | -1.03 | 1.89 | - | 0.99 | 0.45 | -0.44 | 0.01 | 0.63 | 0.73 | |
| 0.37 | 0.96 | 1.05 | 0.25 | 0.39 | 0.77 | 0.37 | 0.01 | 0.96 | 1.45 | 1.34 | 0.37 | -0.8 | -1.84 | -0.51 | -0.88 | -0.0 | 0.18 | -0.26 | -4.38 | -0.24 | - | 0.25 | -0.15 | -3.51 | -2.01 | -1.34 | -0.64 | -1.23 | -0.66 | -0.66 | -0.8 | |
Smo423300 (AGAL2) | - | - | - | - | - | - | - | 1.02 | -0.32 | 2.4 | -0.16 | - | -0.12 | - | -0.93 | -0.09 | - | - | 1.34 | - | - | - | - | 0.68 | 2.58 | 0.88 | 1.18 | 2.0 | 1.24 | - | - | - |
| 0.85 | 0.25 | -0.37 | 0.32 | 0.2 | 0.47 | 0.65 | 0.24 | 0.81 | 2.02 | 0.71 | 0.54 | -0.41 | -0.13 | -1.65 | 0.52 | -1.59 | 0.15 | -0.8 | - | - | - | -0.63 | -0.8 | - | -0.77 | -0.35 | 0.5 | -0.4 | -0.12 | -0.39 | -0.14 | |
| 0.66 | 0.56 | -1.99 | 1.45 | -0.51 | 1.4 | 0.61 | 1.59 | 1.41 | 2.11 | - | -0.17 | - | 0.09 | -0.68 | - | -1.54 | -1.53 | -1.53 | - | - | - | - | - | 1.92 | 1.53 | -0.34 | - | - | - | - | - | |
Smo424602 (JAG) | 1.45 | 0.18 | - | 0.56 | 1.42 | 2.02 | - | - | 2.38 | 3.12 | 2.39 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | -0.36 |
| -0.42 | 1.28 | -0.4 | -0.24 | 1.32 | 1.37 | -0.55 | -0.0 | 0.29 | 1.78 | 1.02 | 0.58 | 0.39 | 0.32 | 0.71 | -0.01 | -0.87 | - | -0.94 | - | -1.73 | - | 0.19 | 0.33 | -1.55 | -1.14 | -1.73 | - | -1.4 | 0.15 | -1.64 | -1.24 | |
| -0.69 | 0.34 | 0.19 | -0.29 | 0.06 | 0.54 | 1.33 | 0.28 | 0.95 | 1.97 | 0.55 | 0.22 | -4.26 | -1.88 | -1.3 | -4.09 | -0.9 | - | 1.06 | - | - | - | -0.37 | -1.27 | -1.63 | -1.57 | 1.6 | 1.5 | -0.42 | -0.69 | -0.93 | -1.12 | |
| - | - | - | - | - | - | - | - | - | 4.26 | - | - | - | - | - | - | - | - | 2.69 | - | - | - | - | - | - | - | - | - | - | - | - | 2.68 | |
| 1.11 | 1.21 | 0.33 | 1.01 | 0.87 | 2.14 | 0.79 | 1.24 | 0.73 | 1.99 | 1.33 | 1.41 | -2.8 | - | -3.59 | - | -1.26 | -2.99 | -1.34 | - | - | - | -2.79 | - | -0.92 | - | -1.45 | -0.63 | -1.93 | - | - | - | |
| -0.44 | - | -3.17 | -3.31 | - | 0.75 | -0.68 | 1.9 | 1.39 | 2.38 | 0.65 | -0.03 | - | - | -0.05 | - | -2.35 | 0.61 | -0.91 | -0.74 | -0.46 | - | -1.25 | - | 1.02 | -0.32 | 1.69 | 0.6 | 0.15 | -1.03 | -1.44 | -2.86 | |
| 1.27 | - | 0.09 | 0.16 | - | - | -0.06 | - | - | 3.84 | - | - | - | 1.22 | - | - | -0.09 | - | - | - | - | - | - | - | - | 1.38 | - | 2.65 | - | - | - | - | |
| - | 0.7 | - | 0.4 | - | 1.8 | - | 0.51 | 1.83 | 2.81 | - | - | - | - | - | - | 0.94 | 2.22 | 0.8 | - | - | - | 0.74 | - | - | - | - | - | 0.85 | 0.83 | - | - | |
| -2.03 | -1.48 | 0.01 | -0.66 | -1.34 | -2.22 | -0.23 | -1.85 | 0.57 | 2.1 | -0.21 | 0.51 | 1.79 | -1.82 | -1.63 | 1.36 | -1.13 | - | 1.45 | - | - | - | -3.8 | -1.29 | - | 1.46 | -0.67 | 1.97 | -1.01 | 0.09 | -1.7 | -0.99 | |
| - | - | - | - | - | - | - | - | - | 3.6 | - | - | - | - | - | 0.16 | - | - | - | 1.47 | 1.6 | - | - | - | 3.69 | - | -15.15 | - | - | - | - | - | |
| 0.75 | 1.34 | -0.34 | 0.71 | 1.24 | 0.39 | -0.09 | 0.18 | 1.45 | 2.22 | 1.13 | 1.0 | - | - | -1.89 | - | -0.33 | -0.29 | -0.65 | -2.57 | - | - | -1.91 | -1.41 | - | -0.7 | -1.35 | -0.53 | -0.58 | -0.33 | -1.93 | 0.34 | |
Smo7414 (CIPK21) | -0.37 | 1.04 | 1.05 | -2.33 | -0.89 | 0.21 | -0.87 | 1.66 | 1.87 | 2.64 | 1.03 | 0.33 | -1.06 | - | -1.62 | - | -1.29 | -0.57 | -3.6 | - | - | -0.6 | -2.24 | -3.7 | 1.66 | - | - | 0.07 | -1.05 | -2.82 | -0.87 | -9.83 |
| - | - | -17.37 | - | - | - | - | - | - | 3.91 | - | - | - | - | - | - | - | - | - | 2.66 | - | - | - | - | 3.42 | - | - | - | - | - | - | - | |
| - | - | - | 0.68 | -0.02 | 0.56 | 0.4 | 0.18 | -0.16 | 2.24 | - | -1.3 | - | - | - | - | - | - | - | 1.39 | - | - | - | -1.15 | - | 0.04 | 2.58 | 3.15 | -1.06 | - | - | - | |
| 0.17 | 0.27 | -0.65 | -1.32 | - | 0.55 | 0.61 | 1.31 | -0.32 | 2.39 | -2.11 | -0.27 | 0.19 | - | 0.32 | -0.63 | -0.8 | - | 0.06 | - | - | -0.26 | 0.41 | 0.05 | - | 0.25 | 1.13 | 0.42 | 0.68 | 0.42 | -0.88 | - | |
Smo95369 (EXP5) | - | - | - | - | - | - | 2.72 | 1.4 | 1.74 | 3.18 | - | 1.7 | - | - | - | 1.96 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.69 | - | - |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.