Heatmap: Cluster_186 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Aerial tissue - Light - ZT1
Aerial tissue - Light - ZT3
Aerial tissue - Light - ZT5
Aerial tissue - Light - ZT7
Aerial tissue - Light - ZT9
Aerial tissue - Light - ZT11
Aerial tissue - Dark - ZT1
Aerial tissue - Dark - ZT3
Aerial tissue - Dark - ZT5
Aerial tissue - Dark - ZT7
Aerial tissue - Dark - ZT9
Aerial tissue - Dark - ZT11
Roots
Root elongation and differentiation zone
Root meristematic zone
Aerial roots and rhizophores
Shoot tips
Microphyll
Strobili
Shoot apical meristem - AC
Shoot apical meristem - Core
Shoot apical meristem - P1
Stem - Top
Stem - Bottom
Whole plant
Aerial tissue - Stress - Dark
Aerial tissue - Stress - High light
Aerial tissue - Stress - Cont
Aerial tissue - Stress - 37C 1h
Aerial tissue - Stress - 37C 3h
Aerial tissue - Stress - 4C 1h
Aerial tissue - Stress - 4C 3h
0.02 0.06 0.13 0.34 1.78 0.49 0.06 -0.44 0.61 0.45 0.61 0.26 0.26 -0.4 0.11 0.29 -0.59 -0.2 -1.46 0.96 - -3.14 0.04 0.61 -1.64 -0.06 -1.69 -1.46 -0.02 0.01 -1.44 -2.02
-0.34 0.69 -1.56 0.35 1.04 0.78 -0.63 -0.5 1.52 -0.49 0.03 -0.01 0.42 -2.7 -1.7 0.23 -1.18 -0.99 -0.62 0.81 -0.58 0.71 -1.51 -1.66 -0.66 0.28 0.54 1.71 -2.0 -2.0 -0.78 -1.66

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.