Heatmap: Cluster_91 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Aerial tissue - Light - ZT1
Aerial tissue - Light - ZT3
Aerial tissue - Light - ZT5
Aerial tissue - Light - ZT7
Aerial tissue - Light - ZT9
Aerial tissue - Light - ZT11
Aerial tissue - Dark - ZT1
Aerial tissue - Dark - ZT3
Aerial tissue - Dark - ZT5
Aerial tissue - Dark - ZT7
Aerial tissue - Dark - ZT9
Aerial tissue - Dark - ZT11
Roots
Root elongation and differentiation zone
Root meristematic zone
Aerial roots and rhizophores
Shoot tips
Microphyll
Strobili
Shoot apical meristem - AC
Shoot apical meristem - Core
Shoot apical meristem - P1
Stem - Top
Stem - Bottom
Whole plant
Aerial tissue - Stress - Dark
Aerial tissue - Stress - High light
Aerial tissue - Stress - Cont
Aerial tissue - Stress - 37C 1h
Aerial tissue - Stress - 37C 3h
Aerial tissue - Stress - 4C 1h
Aerial tissue - Stress - 4C 3h
Smo101011 (CRLK1)
-0.3 -0.12 0.45 0.52 0.36 0.25 0.9 0.92 1.01 1.15 1.03 0.74 -1.17 -1.2 -0.8 -1.12 -0.32 -1.1 -0.72 -1.79 -2.31 -1.44 -0.52 -0.49 -1.72 0.87 -0.57 -0.52 -0.12 -0.24 -0.04 -0.0
Smo112063 (EIL1)
0.37 0.72 0.88 0.66 0.34 0.21 1.26 1.35 1.25 1.54 1.34 1.25 -1.55 -0.68 -0.38 -1.12 -1.61 -0.91 -1.97 -4.85 -5.86 -5.53 -1.31 -1.65 -6.16 -0.21 -0.87 -0.88 -0.97 -1.04 -1.14 -0.84
0.39 0.47 1.14 1.05 -0.42 -0.79 1.3 1.81 1.37 1.77 1.6 1.71 -5.24 -31.8 - -5.93 -1.31 -3.3 -5.59 -2.02 -5.42 - -2.87 -7.49 -2.01 1.43 -0.75 -1.59 -1.94 -3.22 -2.72 -3.62
0.54 0.23 0.78 0.87 0.02 0.67 1.22 1.74 1.43 1.93 1.38 1.16 -4.55 -6.21 -4.59 -7.0 -1.5 -1.14 -1.91 -1.98 -2.05 -2.96 -3.15 -3.89 -2.36 0.71 -0.6 -0.73 -1.65 -1.54 -1.79 -2.59
-1.27 -0.22 1.02 0.99 -0.34 -1.01 0.85 1.93 1.94 2.54 1.95 1.03 - - -7.48 - -5.11 -6.47 -5.18 -4.0 -4.18 - -7.23 -5.13 -2.67 1.79 -3.78 - -4.0 -3.98 -2.99 -3.77
Smo136907 (CRR22)
-1.18 -0.96 0.31 0.38 -0.27 -0.09 1.08 1.6 1.47 1.72 1.46 0.96 0.04 -2.62 -1.34 -1.4 -1.25 -1.92 -1.5 -6.37 -4.96 - -2.28 -2.11 -2.59 1.67 -0.15 -0.57 -1.43 -1.62 -0.21 -0.25
-0.21 0.21 0.57 0.61 0.39 0.25 0.67 0.72 0.72 0.79 0.63 0.42 -0.19 -0.48 -0.25 -0.05 -0.26 -0.88 -0.03 -1.75 -2.19 -2.16 -0.18 -0.19 -1.66 0.85 -0.64 -0.6 -0.04 -0.18 -0.48 -0.49
Smo165268 (PXY)
-0.73 -0.1 0.46 0.68 0.66 0.66 1.19 1.17 1.53 1.27 1.01 0.4 -1.54 -1.9 -1.6 -2.04 0.05 -1.02 -1.84 -0.41 -1.08 0.01 -0.96 -0.9 -1.78 -1.03 -0.84 -1.01 -0.56 -0.34 -0.4 -0.26
0.44 -0.27 0.03 0.02 -0.99 -1.22 0.61 1.35 1.16 1.78 1.66 1.63 0.57 -0.03 -0.49 0.28 -1.82 -0.96 -1.12 -7.78 -4.41 -10.09 -1.51 -1.42 -2.46 0.41 -1.61 -2.56 -0.39 -0.54 -1.27 -0.81
Smo169767 (SK1)
-0.46 -0.03 0.13 0.19 -0.12 -0.42 0.92 1.11 1.09 1.12 1.04 1.06 -0.18 -0.61 -1.49 -0.81 -1.52 -1.51 -0.97 -3.63 -1.23 -2.95 -0.09 -0.02 0.14 0.41 0.6 0.25 -0.75 -0.92 -0.86 -0.21
-0.12 -0.27 0.15 0.04 -0.51 -0.39 1.03 1.27 1.2 1.72 1.6 1.56 0.03 -0.52 -1.79 0.08 -1.65 -1.56 -1.96 -3.85 -3.27 -3.6 -1.69 -2.78 -5.52 0.96 -0.74 -0.81 -0.12 -0.42 -0.93 -0.65
Smo177477 (SKIP16)
-0.3 -0.1 0.01 -0.02 -0.24 -0.17 0.69 0.98 1.13 1.46 1.23 1.29 -0.2 -0.56 -1.23 -0.28 -1.07 -1.22 -0.62 -1.26 -1.24 -3.03 -0.89 -0.81 -1.87 -0.08 -0.83 -0.99 -0.28 -0.46 0.55 0.54
Smo235879 (CYP703)
0.22 0.3 0.86 0.76 0.34 0.57 0.49 0.88 1.12 1.21 1.04 0.76 -0.4 -0.42 -1.23 -2.6 -0.83 0.21 -0.84 -4.91 -1.76 -1.28 0.1 -0.67 -3.15 0.72 -2.06 -1.74 -0.55 -0.44 -0.84 -0.38
-0.69 0.02 0.27 0.37 0.05 0.29 0.81 0.98 0.81 0.96 0.43 0.33 -0.06 0.19 -0.24 -0.27 -0.42 -0.63 -0.23 -4.2 -0.41 -2.53 -0.16 -0.35 -0.8 0.08 -0.56 -0.54 -0.33 -0.41 0.11 0.36
-0.78 0.72 1.44 1.5 0.91 0.89 1.52 1.26 1.16 1.35 0.95 0.71 -0.88 -2.83 -3.19 -2.29 -2.15 -1.69 -2.45 -5.28 -2.45 - -0.42 -0.22 -0.95 -0.48 -1.52 -1.16 -1.4 -1.58 -1.62 -1.85
-0.87 0.38 0.67 1.16 0.67 1.06 1.68 1.62 1.69 1.38 0.59 0.36 -1.95 -2.01 -2.84 -2.02 -2.35 -1.64 -3.82 - - - -0.23 -0.62 -2.18 -0.85 0.51 0.66 -1.75 -2.48 -1.52 -2.57
-0.8 0.32 0.64 0.27 -0.19 -0.03 1.19 1.34 1.4 1.51 1.39 1.08 -2.18 0.26 0.22 -1.81 -2.54 -0.98 -2.26 -3.03 -2.12 -5.8 -2.61 -3.36 -0.88 0.62 0.34 0.21 -1.38 -1.4 -0.95 -1.54
0.64 0.97 0.78 0.7 -0.11 -0.77 0.94 1.09 1.02 1.52 1.43 1.45 -1.21 0.45 -2.33 -1.35 -3.65 -4.81 -1.51 -6.88 -5.17 - -3.19 -2.97 -0.49 1.56 -1.1 -1.35 -1.2 -1.59 -0.88 -1.7
0.86 1.1 0.92 1.15 -0.28 -0.12 0.98 1.5 1.5 1.73 1.78 1.62 -3.14 0.18 -3.08 -3.99 -5.22 -6.21 -4.49 - - - -6.27 -5.7 -3.79 1.29 -1.94 -2.2 -3.64 -5.3 -4.01 -7.36
-0.25 0.14 0.29 0.69 -1.0 -0.16 1.25 1.4 1.32 1.85 1.41 0.96 -0.9 -0.71 -0.12 -2.36 -1.2 -4.3 -2.06 -3.1 -2.65 - -4.66 -2.45 -0.74 1.71 -0.71 -1.22 -1.6 -1.54 -1.33 -0.66
0.18 0.57 1.44 1.28 0.46 0.38 1.77 1.35 1.67 1.52 1.34 1.31 -7.93 - -8.45 - -1.66 -2.02 -3.97 -4.68 -1.22 -1.13 -3.96 -4.26 -0.37 -0.83 -2.2 -1.87 -1.84 -2.42 -1.78 -1.94
-0.53 -0.21 -0.07 -0.01 -0.36 -0.25 0.59 0.77 1.16 1.45 1.28 1.03 -0.16 -0.53 -0.51 -0.24 -0.46 -1.77 -0.75 -1.31 -0.98 -0.43 -0.56 -0.37 -2.06 1.2 -1.14 -0.88 -0.65 -0.55 -0.47 -0.29
Smo407084 (BEH3)
-0.23 0.39 0.6 0.31 -0.34 -0.04 0.67 0.87 0.95 1.09 1.09 1.01 -0.82 -2.48 -1.13 -0.26 -0.75 -0.89 -1.1 -0.84 -0.33 -3.45 0.59 0.42 -2.3 0.49 -0.69 -1.03 -0.33 -0.43 -0.37 -0.41
-0.85 0.53 0.93 0.9 0.77 0.73 0.98 0.97 0.9 0.85 0.62 0.01 -0.5 -1.19 -0.86 -0.66 -0.73 -0.7 -1.29 -4.11 -4.06 -4.35 -0.12 -0.52 -3.59 0.83 0.45 0.44 -1.13 -0.9 -0.68 -0.37
-0.41 -0.09 0.65 0.49 0.01 -0.39 1.23 1.27 1.47 1.84 1.74 1.74 -3.11 -1.47 -1.1 -2.59 -2.24 -2.78 -2.15 -2.64 -1.49 -5.5 -1.59 -1.72 -2.32 0.43 -1.09 -1.82 -1.02 -1.28 -0.21 -0.28
1.0 0.89 0.77 0.76 -0.65 -0.84 0.8 1.62 1.39 2.06 1.96 1.67 -2.73 -0.84 -5.03 -3.99 -5.38 -4.57 -2.92 - - - -4.31 -4.37 -3.3 1.35 -1.9 -2.2 -3.14 -2.86 -2.02 -3.11
-0.67 0.38 0.63 0.65 -0.77 -0.6 1.62 1.44 1.58 1.84 1.45 1.22 -2.14 -3.24 -3.11 -1.72 -2.3 -1.16 -1.28 -6.75 -2.17 -5.09 -1.15 -1.54 -1.89 0.07 -1.22 -1.16 -0.78 -1.48 -0.21 0.49
0.26 -0.07 0.48 0.62 0.12 0.08 0.57 1.18 1.11 1.09 1.16 0.86 0.15 -1.12 -2.76 -0.18 -0.92 -1.15 -0.36 -4.31 -2.42 -4.38 -0.43 -0.48 -2.81 0.48 -0.61 -1.01 0.03 -0.25 0.18 -0.14
Smo414754 (PUB25)
-0.06 0.24 0.59 0.54 0.55 0.38 0.66 0.88 1.19 1.55 1.37 1.24 -1.12 -0.63 -1.63 -0.87 -0.52 -0.36 -0.96 -2.38 -3.8 -2.36 -0.04 -0.32 -5.59 0.08 -1.68 -1.7 -0.68 -0.73 -0.5 -0.46
-0.21 0.75 0.83 0.6 0.68 0.93 1.47 1.55 1.55 1.39 0.89 0.66 -6.74 -5.15 - - -0.99 -4.57 -2.65 - - - -1.61 -2.51 -0.09 -0.92 0.6 0.66 -0.71 -0.85 -1.07 -0.95
-0.93 0.73 0.95 0.47 0.32 0.3 1.32 1.63 1.78 1.82 1.17 1.25 -3.28 -2.76 -6.38 -4.18 -4.99 - -5.99 - - -4.11 -3.24 -3.98 -2.84 1.65 0.69 0.05 -4.31 - -2.44 -3.39
0.03 0.82 1.12 0.87 0.12 -0.06 0.78 1.01 0.91 1.39 1.22 1.06 -1.35 -0.31 -4.59 -1.72 0.01 -0.69 -0.96 -6.16 -3.64 -5.15 -0.73 -2.24 -4.85 1.02 -0.84 -1.05 -0.2 -0.2 -0.7 -1.16
-0.54 0.26 0.71 0.9 0.27 -0.03 1.14 1.41 1.48 1.6 1.26 0.74 -0.63 -1.21 -1.9 -0.87 -1.78 -2.46 -1.04 -1.95 -2.25 -6.72 -0.64 -1.03 -2.58 0.95 -1.54 -1.6 -0.48 -0.75 -0.73 -0.93
0.46 0.43 0.93 0.66 0.07 -0.36 0.44 1.17 0.77 1.33 1.27 1.08 -0.2 -2.48 -10.86 -0.11 -0.62 -1.5 -0.55 -4.67 -1.19 -7.59 -1.22 -0.86 -0.35 1.14 -1.58 -1.8 -0.08 -0.46 -0.44 -1.1
Smo423914 (NEDD1)
-0.46 -0.14 0.31 0.39 0.3 0.09 0.87 1.09 1.11 1.18 0.95 0.61 -0.02 0.28 -0.68 -0.35 -0.93 -2.0 -1.16 -5.26 -6.56 - 0.06 -0.38 -5.15 0.55 0.13 0.22 -0.29 -0.45 -0.3 -0.16
-1.04 0.01 0.69 1.04 0.86 0.76 1.32 1.38 1.38 1.34 1.16 0.88 -0.44 -2.24 -2.77 -1.19 -1.99 -3.08 -2.43 -2.85 -2.12 -3.51 -1.03 -1.07 -0.62 0.42 -0.07 -0.59 -1.55 -1.76 -0.47 -0.87
-0.21 0.44 1.39 0.86 1.11 0.52 1.45 1.62 1.48 1.47 1.15 0.97 -1.26 -2.43 -2.46 -2.49 -3.65 -3.98 -3.63 - - -5.36 -1.57 -1.61 -3.47 0.87 0.07 -1.26 -2.85 -3.05 -1.43 -1.65
-1.26 0.31 0.94 0.97 0.89 0.53 1.46 1.49 1.52 1.34 1.23 0.7 -1.67 -2.12 -2.44 -1.6 -2.75 -4.85 -3.37 -4.95 -3.22 -4.62 -1.37 -1.82 -3.58 1.11 0.49 0.19 -2.52 -2.48 -1.1 -1.17
-0.86 0.5 1.05 1.38 1.1 0.88 1.74 1.67 1.8 1.33 1.46 1.16 -1.3 -4.54 -3.73 -2.13 -2.44 -9.51 -3.11 - - - -2.6 -2.04 -4.5 -0.74 -1.34 -1.07 -2.37 -2.75 -1.37 -2.7
-0.43 0.33 0.72 0.5 0.02 -0.07 0.89 1.07 1.17 1.35 1.04 0.95 -0.81 -0.59 -1.53 -0.04 -1.0 -0.89 -0.86 -2.74 -2.5 -8.42 -1.1 -1.35 -1.28 -0.22 -0.56 -0.68 -0.28 -0.36 0.44 0.45
-0.95 -0.27 0.45 0.51 0.22 -0.11 0.89 1.11 1.19 1.52 1.29 1.08 -0.05 -2.31 -1.63 -0.17 -1.65 -1.57 -0.58 -2.17 -2.49 -3.8 -0.82 -1.13 -1.55 1.07 0.2 0.33 -0.56 -0.9 -1.64 -1.15
-0.09 0.31 0.76 0.63 0.78 1.13 1.01 1.1 1.37 1.52 1.33 0.7 -2.48 -1.68 -0.04 -1.39 -1.18 -0.79 -0.7 -1.99 -1.32 -3.96 -0.87 -1.0 -1.01 -2.21 -1.19 -1.07 -1.0 -1.12 -0.77 -0.92
Smo431151 (TZP)
-0.35 0.16 0.49 0.46 0.53 0.37 1.2 1.29 1.1 1.13 0.94 0.84 -1.61 -0.78 -0.85 -2.03 -0.83 -1.02 -1.43 -4.11 -1.65 -2.67 -0.37 -0.49 -1.54 0.23 0.11 0.31 -0.31 -0.26 -0.82 -0.67
Smo437944 (HSS)
-0.11 0.28 0.74 0.56 0.42 0.21 1.1 1.03 0.62 0.78 0.73 0.76 -0.6 -1.49 -1.92 -0.31 -0.62 -1.44 0.1 -4.73 -3.39 -3.86 -0.59 -0.48 -3.39 1.02 0.03 0.21 -0.22 -0.17 -0.28 -0.31
-0.44 0.23 0.83 0.82 -1.77 -2.48 1.53 1.62 1.39 2.08 1.85 1.88 -1.36 -1.54 -2.72 -2.06 -3.37 -1.8 -2.66 -4.97 -1.89 -3.13 -3.72 -3.46 -3.62 0.06 -3.16 -3.32 -0.76 -1.03 -0.77 -0.47
-0.33 0.03 0.45 0.43 -0.41 -0.42 0.53 1.19 1.12 1.42 1.26 0.95 -0.45 -0.06 -0.37 -0.78 -1.97 -1.98 -0.45 -1.77 -2.32 -3.34 -0.71 -0.21 -3.34 1.2 -0.67 -1.43 -0.97 -0.87 0.02 0.33
-0.37 0.33 0.71 0.53 0.29 0.08 0.86 0.74 0.72 0.71 0.65 0.42 0.08 -1.16 -1.36 0.06 -0.47 -0.84 -0.77 -4.77 -1.78 -2.94 -0.24 -0.48 -1.31 1.08 0.27 0.4 -0.12 -0.27 -0.8 -0.45
-0.64 -0.7 0.05 0.31 0.45 0.38 0.51 1.26 1.23 1.28 1.16 0.5 0.55 -0.61 -1.26 -0.75 -1.34 -1.77 -0.68 -5.39 -3.2 -4.56 -0.17 -0.43 -1.25 0.25 0.48 0.23 -0.11 -0.0 -0.9 -0.6
-0.39 -0.02 0.42 0.35 0.32 0.23 0.76 1.07 0.99 1.17 0.89 0.61 0.04 0.21 -1.02 -0.14 -0.57 -1.08 -1.04 -3.5 -2.6 -6.35 0.31 -0.11 -3.17 0.25 -0.35 -0.29 -0.09 -0.27 -0.54 -0.34
-1.11 -0.26 0.47 0.61 0.36 0.23 0.95 0.98 0.95 0.9 0.62 0.35 0.25 0.15 -0.94 0.2 -0.71 -1.05 -0.24 -5.82 -2.78 -5.2 0.02 -0.29 -3.48 0.75 -0.07 -0.02 -0.2 -0.34 -0.55 -0.27
Smo75487 (AFB1)
0.18 0.74 0.98 0.66 0.3 0.22 1.02 1.22 1.2 1.4 1.23 1.18 -1.69 -2.35 -4.05 -1.15 -1.06 -1.35 -1.74 -1.14 -1.25 -1.65 -2.19 -2.49 -2.5 -0.12 -0.38 -0.4 -0.27 -0.37 -0.48 -0.68
-0.21 0.25 0.61 0.54 0.34 0.29 0.85 1.06 0.85 1.11 0.87 0.64 -0.1 -0.38 -0.16 -0.16 -0.97 -1.03 -0.49 -2.31 -1.71 -1.15 -0.53 -0.47 -3.55 0.91 -1.06 -1.1 -0.37 -0.36 -0.87 -0.6
-0.09 0.38 0.95 0.94 0.39 0.53 0.77 0.79 1.38 1.61 1.26 1.09 -1.83 -1.32 -1.77 -2.68 -1.46 -1.34 -2.25 -4.4 -2.34 -7.32 -0.76 -0.39 -3.52 0.92 -0.59 -0.38 -1.58 -1.42 -0.42 -0.04
Smo86187 (TT7)
-0.06 0.63 1.36 1.21 1.03 1.16 1.66 1.42 1.91 1.36 1.26 1.09 -5.85 - -6.67 -6.19 -4.25 -6.84 -3.75 - -5.93 - -4.92 -5.61 -2.08 0.04 -0.22 -0.03 -3.94 -3.02 -3.54 -4.47
Smo91939 (WAT1)
0.22 0.22 0.35 0.84 0.6 0.39 0.88 1.46 1.69 1.99 1.54 1.25 -4.09 -4.88 -4.34 -4.1 -1.78 -3.95 -2.37 -1.6 -1.6 - -2.6 -2.52 -0.61 0.89 -2.09 -2.48 -1.72 -1.73 -0.26 -0.8
0.48 0.74 0.94 0.78 0.46 0.86 1.22 1.42 1.45 2.02 1.67 1.61 - -4.03 - -4.92 -3.22 0.09 -3.07 - - - -3.04 -4.01 -3.41 -1.4 -1.06 0.01 -3.32 -2.75 -2.94 -2.59

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.