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View as: (view raw or row-normalized)
View using InCHLib : here ( Experimental feature, still under development)
(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
| Gene | Aerial tissue - Light - ZT1 | Aerial tissue - Light - ZT3 | Aerial tissue - Light - ZT5 | Aerial tissue - Light - ZT7 | Aerial tissue - Light - ZT9 | Aerial tissue - Light - ZT11 | Aerial tissue - Dark - ZT1 | Aerial tissue - Dark - ZT3 | Aerial tissue - Dark - ZT5 | Aerial tissue - Dark - ZT7 | Aerial tissue - Dark - ZT9 | Aerial tissue - Dark - ZT11 | Roots | Root elongation and differentiation zone | Root meristematic zone | Aerial roots and rhizophores | Shoot tips | Microphyll | Strobili | Shoot apical meristem - AC | Shoot apical meristem - Core | Shoot apical meristem - P1 | Stem - Top | Stem - Bottom | Whole plant | Aerial tissue - Stress - Dark | Aerial tissue - Stress - High light | Aerial tissue - Stress - Cont | Aerial tissue - Stress - 37C 1h | Aerial tissue - Stress - 37C 3h | Aerial tissue - Stress - 4C 1h | Aerial tissue - Stress - 4C 3h |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| -0.1 | -0.14 | -0.25 | -0.16 | 0.06 | -0.08 | -0.26 | 0.11 | 0.23 | 0.21 | 0.22 | 0.17 | -0.13 | 0.25 | 0.87 | -0.12 | -0.57 | -2.0 | 0.22 | 0.74 | -0.91 | -0.74 | -0.38 | -0.33 | 1.64 | 0.33 | -0.28 | -0.29 | -0.57 | -0.51 | -0.82 | -0.63 | |
Smo109806 (ECHIA) | -0.27 | -0.31 | -0.4 | -0.24 | -0.14 | -0.04 | -0.19 | -0.03 | 0.04 | 0.02 | -0.13 | -0.17 | 0.16 | 0.58 | 0.55 | 0.16 | -0.39 | -1.33 | -0.01 | 0.17 | 0.52 | -1.85 | 0.05 | 0.23 | 1.69 | -0.2 | -0.11 | -0.12 | -0.32 | -0.36 | -0.62 | -0.74 |
| -0.03 | -0.27 | -0.27 | 0.05 | 0.13 | -0.15 | -0.13 | 0.1 | 0.22 | 0.27 | -0.06 | -0.07 | -0.15 | -0.6 | -0.11 | 0.07 | -0.25 | -0.6 | 0.27 | -0.44 | -0.72 | -2.59 | -0.08 | 0.23 | 1.62 | 0.82 | 0.03 | 0.3 | -0.41 | -0.14 | -0.5 | -0.43 | |
Smo114752 (OVA5) | -0.19 | 0.08 | 0.04 | 0.59 | 0.52 | 0.4 | 0.8 | 0.84 | 0.59 | 0.76 | 0.62 | 0.4 | -1.37 | -0.43 | 0.07 | -1.38 | -1.48 | -1.79 | -1.22 | 1.63 | -0.08 | -1.6 | -1.45 | -1.04 | 1.39 | -0.86 | 0.17 | -0.72 | -1.47 | -1.5 | -1.44 | -1.54 |
| -0.01 | 0.07 | 0.05 | -0.0 | 0.03 | 0.02 | -0.06 | -0.05 | -0.04 | 0.21 | 0.13 | -0.04 | 0.36 | 0.6 | -0.85 | 0.48 | -0.46 | -1.11 | -0.22 | 0.71 | 0.63 | -3.43 | -0.2 | -0.09 | 0.94 | 0.16 | -0.33 | -0.13 | -0.22 | -0.17 | -0.29 | -0.84 | |
Smo139152 (NAD5) | 0.59 | 0.51 | 0.73 | 0.3 | 0.59 | 0.63 | -0.06 | 0.25 | 0.31 | 0.48 | 0.27 | 0.25 | -3.47 | -1.43 | -2.34 | -0.54 | -0.87 | -0.69 | -1.0 | 1.76 | 0.78 | -3.93 | -1.06 | -0.15 | 1.06 | -1.22 | -0.82 | -0.45 | -0.38 | -0.59 | -0.61 | -0.98 |
| -0.68 | -0.3 | -0.15 | -0.22 | 0.21 | -0.0 | -0.24 | -0.22 | -0.39 | -0.56 | -0.7 | -0.95 | 0.19 | -0.09 | -1.48 | 0.28 | -0.26 | -0.65 | 0.32 | 0.75 | 0.18 | -0.3 | 0.67 | 0.85 | 0.55 | 0.52 | 0.24 | 0.35 | -0.13 | -0.07 | -0.08 | -0.29 | |
| -0.16 | -0.14 | -0.22 | -0.09 | 0.08 | 0.0 | -0.01 | 0.22 | 0.04 | 0.13 | 0.05 | -0.15 | 0.1 | -0.58 | 0.08 | 0.22 | -0.39 | -0.87 | 0.29 | 0.41 | -0.6 | -0.83 | -0.26 | -0.17 | 1.05 | 0.81 | 0.23 | 0.18 | -0.21 | -0.1 | -0.46 | -0.48 | |
Smo158880 (NOV) | -0.23 | 0.0 | 0.17 | 0.25 | 0.33 | 0.29 | 0.52 | 0.51 | 0.47 | 0.4 | 0.3 | 0.13 | -0.91 | -1.4 | 0.14 | -0.96 | -0.57 | -1.13 | -0.31 | 1.02 | 0.25 | -1.82 | -0.49 | -0.55 | -0.24 | 0.11 | 0.41 | 0.34 | -0.44 | -0.29 | -0.08 | 0.1 |
| -0.56 | -0.45 | -0.47 | -0.2 | 0.18 | -0.42 | -0.79 | -0.43 | -0.22 | -0.46 | -0.18 | -0.25 | 0.56 | 0.03 | -0.67 | 0.58 | -0.73 | -0.03 | 0.16 | 1.1 | 0.6 | 0.29 | 0.28 | 0.51 | 0.47 | 0.29 | 0.16 | 0.12 | -0.1 | -0.46 | -0.72 | -0.81 | |
| -0.26 | -0.55 | -0.6 | -0.35 | -0.31 | -0.49 | -0.63 | -0.29 | -0.01 | -0.08 | -0.02 | -0.11 | 0.47 | 1.27 | 0.68 | 0.19 | -0.91 | -0.63 | 0.1 | 0.11 | 0.94 | -0.47 | -0.05 | 0.05 | 1.39 | -0.43 | -0.49 | -0.49 | -0.51 | -0.48 | -0.54 | -0.36 | |
| -0.42 | -0.78 | -0.65 | -0.06 | -0.31 | -0.34 | 0.18 | 0.94 | 0.73 | 0.82 | 0.4 | -0.05 | -2.63 | -2.89 | -2.23 | -1.55 | -1.84 | -1.66 | 1.41 | 1.64 | 0.65 | -3.06 | -1.89 | -1.68 | 0.17 | 1.53 | 0.08 | -0.87 | -0.75 | -1.15 | 0.05 | 0.61 | |
| -0.22 | -0.2 | -0.14 | -0.08 | -0.26 | -0.17 | -0.21 | 0.22 | -0.03 | 0.12 | 0.08 | -0.09 | 0.06 | -0.25 | -2.04 | 0.18 | -0.37 | -0.33 | 0.11 | -0.08 | -0.19 | -2.42 | -0.16 | -0.13 | 1.22 | 0.65 | 0.45 | 0.36 | -0.04 | -0.04 | 0.32 | 0.17 | |
Smo231474 (MSD1) | -0.36 | -0.59 | -0.76 | -0.6 | -0.58 | -0.62 | -0.49 | -0.43 | -0.33 | -0.3 | -0.37 | -0.38 | 0.79 | 0.78 | 0.32 | 0.72 | -0.48 | -0.18 | 0.2 | -0.04 | 0.75 | -1.11 | -0.14 | 0.25 | 1.36 | 0.19 | -0.17 | -0.36 | -0.31 | -0.15 | -0.02 | 0.02 |
Smo402076 (OCP3) | -0.65 | -1.17 | -0.95 | -0.63 | -0.15 | -0.12 | 0.23 | 0.34 | 0.33 | 0.28 | -0.01 | -0.36 | -0.1 | -1.02 | -0.99 | -0.69 | -0.54 | -0.49 | -0.53 | 1.15 | 0.02 | 0.93 | -0.78 | -0.78 | 1.35 | 0.95 | 0.68 | 0.66 | -0.3 | -0.3 | -0.88 | -1.06 |
Smo405777 (TET8) | -0.13 | 0.17 | 0.19 | -0.14 | 0.04 | -0.03 | -0.04 | -0.13 | -0.02 | -0.15 | -0.17 | -0.6 | 0.35 | 0.8 | -0.25 | 0.34 | -0.11 | 0.39 | -0.4 | -2.24 | 0.68 | 0.06 | 0.52 | 0.5 | 0.89 | -0.81 | -0.5 | -0.85 | -0.28 | -0.16 | -0.53 | -0.61 |
| -0.27 | -0.36 | -0.03 | 0.11 | 0.29 | 0.2 | 0.07 | 0.47 | 0.42 | 0.4 | 0.36 | -0.06 | 0.06 | -1.27 | -2.01 | -0.3 | -0.51 | -0.98 | -0.38 | 1.27 | 0.21 | -1.73 | -0.33 | -0.41 | 0.57 | 0.92 | 0.48 | 0.48 | -0.33 | -0.41 | -1.1 | -0.92 | |
| -0.01 | 0.05 | 0.29 | 0.01 | -0.15 | 0.39 | 0.19 | 0.22 | 0.05 | 0.22 | 0.15 | -0.08 | -0.98 | 0.05 | -0.19 | -0.31 | -1.0 | -2.44 | 0.04 | 1.34 | -1.01 | -2.14 | -0.14 | -0.16 | 1.44 | 0.1 | 0.51 | 0.56 | -0.85 | -0.81 | -0.99 | -0.6 | |
| -0.35 | -0.41 | 0.1 | -0.25 | 0.28 | 0.28 | -0.17 | 0.16 | -0.05 | -0.39 | -0.35 | -0.38 | 0.63 | 0.07 | 0.86 | 0.27 | -0.32 | 0.25 | 0.63 | 0.29 | -1.8 | -0.17 | 0.61 | 0.68 | 0.56 | -1.24 | -0.85 | -0.62 | -0.38 | 0.15 | -0.59 | -1.03 | |
| -0.14 | 0.14 | -0.37 | -0.18 | -0.33 | 0.05 | 0.03 | 0.47 | 0.28 | 0.52 | 0.72 | -0.26 | -0.71 | 0.65 | 0.24 | -0.78 | -1.34 | -2.89 | -0.29 | 0.9 | -0.28 | -1.35 | -1.33 | -1.64 | 1.25 | 1.44 | 0.86 | 1.13 | -1.93 | -2.09 | -2.82 | -2.72 | |
| -0.04 | -0.01 | -0.12 | -0.22 | -0.36 | -0.09 | -0.01 | -0.14 | 0.22 | 0.16 | 0.17 | 0.01 | -0.75 | -0.49 | -0.36 | -0.79 | -0.46 | -0.25 | -0.44 | 1.46 | 0.47 | 0.54 | -0.23 | -0.22 | 1.12 | -0.29 | -0.08 | -0.04 | -0.6 | -0.39 | -0.37 | -0.23 | |
| 0.03 | -0.12 | -0.09 | -0.17 | -0.12 | -0.02 | -0.12 | 0.22 | 0.37 | 0.25 | 0.14 | 0.16 | -0.72 | -0.76 | -0.88 | -0.45 | -0.48 | -0.73 | -0.26 | 0.39 | 0.39 | 0.44 | -0.32 | -0.37 | 1.57 | 0.57 | 0.1 | -0.08 | -0.33 | -0.26 | -0.64 | -0.65 | |
| -0.51 | -0.74 | -0.96 | -0.48 | -0.55 | -0.37 | -0.24 | 0.2 | 0.1 | 0.23 | -0.02 | 0.08 | -0.76 | -1.15 | -0.3 | -0.55 | -0.39 | -3.27 | -0.74 | 1.25 | -0.04 | 0.0 | -0.34 | -0.32 | 2.1 | 0.88 | 0.45 | 0.33 | -0.24 | -0.18 | -0.38 | -0.92 | |
| 0.69 | 0.67 | 0.05 | 0.29 | 0.72 | 0.55 | 0.86 | 0.74 | 0.95 | 0.87 | 0.44 | 0.69 | -5.23 | -1.54 | -0.21 | -3.95 | -4.9 | -4.14 | -3.03 | 2.06 | 1.96 | -6.19 | -4.86 | -4.55 | -1.69 | 0.14 | -0.17 | 0.11 | -3.53 | -4.57 | -6.95 | -5.12 | |
| -0.49 | -0.89 | -1.26 | -1.37 | -1.71 | -0.74 | -1.22 | -0.58 | -0.26 | -0.3 | -0.26 | -0.28 | 0.29 | -1.72 | -1.39 | 0.32 | -0.57 | -3.61 | 0.21 | 1.97 | 0.79 | 0.62 | 0.25 | 0.28 | 1.97 | 0.81 | -0.61 | -0.68 | -0.3 | -0.06 | -0.68 | -0.69 | |
| 0.29 | -0.1 | -0.4 | -0.25 | -0.39 | -0.33 | 0.01 | 0.3 | 0.43 | 0.6 | 0.55 | 0.74 | -0.06 | 0.49 | -0.8 | -0.25 | -1.16 | -1.15 | -0.65 | 1.25 | 0.31 | -2.53 | -0.51 | -0.37 | 0.64 | 0.37 | 0.09 | 0.04 | -0.45 | -0.46 | -0.4 | -0.5 | |
| -0.76 | -0.02 | -0.09 | 0.07 | 0.13 | 0.05 | 0.32 | 0.39 | 0.28 | 0.23 | 0.13 | 0.03 | -0.45 | -0.54 | -0.25 | -0.32 | -0.25 | -0.69 | 0.33 | 0.91 | -0.84 | -0.77 | -0.22 | -0.3 | 0.66 | 0.75 | 0.16 | -0.11 | -0.08 | -0.24 | -0.35 | -0.18 | |
| -0.02 | -0.07 | -0.46 | -0.26 | 0.04 | 0.15 | -0.04 | -0.07 | -0.13 | -0.26 | -0.23 | -0.4 | 0.19 | -0.41 | 0.34 | 0.47 | -0.31 | -0.14 | 0.32 | 0.28 | -0.87 | -0.63 | -0.26 | -0.29 | 0.79 | 0.89 | 0.63 | 0.45 | -0.22 | -0.27 | -0.76 | -0.4 | |
| -0.38 | -0.3 | -0.08 | -0.02 | 0.19 | 0.13 | -0.1 | 0.08 | 0.02 | 0.03 | -0.19 | -0.36 | 0.03 | -0.19 | 0.06 | 0.14 | -0.73 | -1.22 | -0.14 | 1.25 | 0.78 | -0.01 | -0.41 | -0.21 | 1.15 | 0.23 | 0.12 | 0.17 | -0.68 | -0.62 | -0.99 | -0.98 | |
Smo74145 (VEP1) | -10.56 | -2.52 | -3.2 | -0.9 | -1.9 | 0.44 | -1.73 | -0.87 | -3.19 | - | -3.43 | - | -0.51 | - | - | 0.48 | -0.36 | 0.28 | 1.2 | 1.59 | -4.98 | -0.81 | -0.25 | 0.96 | 3.37 | -1.3 | -24.83 | -0.33 | 0.65 | 0.02 | -0.18 | -0.44 |
| -0.05 | 0.16 | -0.0 | 0.25 | 0.03 | 0.3 | -0.03 | 0.17 | 0.06 | 0.13 | 0.06 | -0.16 | -0.51 | -0.35 | 0.04 | -0.36 | -0.24 | -0.46 | -0.03 | 0.24 | -0.18 | -0.37 | -0.3 | -0.33 | 1.38 | 0.15 | 0.35 | 0.62 | -0.25 | -0.2 | -1.31 | -1.46 | |
Smo77429 (COV1) | -0.21 | -0.71 | -0.8 | -0.53 | -0.56 | -0.59 | -0.6 | -0.04 | 0.1 | 0.19 | 0.09 | 0.08 | 0.41 | -0.42 | -0.24 | 0.38 | -1.03 | -1.33 | 0.02 | 0.9 | 0.58 | 0.12 | -0.28 | 0.1 | 1.76 | 0.85 | -0.73 | -0.87 | -0.38 | -0.49 | -0.35 | -0.18 |
| -0.32 | -0.34 | -0.27 | -0.22 | -0.26 | 0.1 | 0.12 | 0.08 | 0.42 | -0.03 | -0.24 | -0.18 | -0.23 | -0.88 | 0.64 | 0.09 | -0.91 | -1.11 | 0.39 | 1.03 | -0.09 | -2.0 | -0.22 | 0.07 | 1.04 | 0.96 | 0.62 | 0.31 | -0.52 | -0.29 | -1.42 | -1.03 | |
| -0.09 | -0.16 | -0.01 | 0.01 | 0.06 | 0.19 | -0.01 | 0.22 | 0.12 | 0.08 | 0.16 | -0.09 | 0.09 | -0.4 | -0.02 | 0.52 | -0.3 | -1.19 | 0.46 | 0.68 | -0.6 | -1.5 | 0.27 | 0.34 | 0.27 | 0.38 | -0.15 | -0.2 | -0.01 | 0.02 | -0.59 | -0.49 | |
Smo78966 (PRA1.A1) | -0.2 | -0.22 | -0.1 | -0.01 | 0.02 | -0.12 | -0.23 | -0.37 | -0.37 | -0.31 | -0.34 | -0.39 | 0.48 | 0.56 | 0.27 | 0.39 | -0.34 | -0.42 | 0.06 | 0.22 | 0.26 | 0.04 | 0.14 | 0.36 | 0.98 | -0.75 | -0.64 | -0.32 | -0.15 | 0.06 | -0.06 | 0.0 |
Smo79688 (MEMB11) | -0.15 | -0.28 | -0.42 | -0.23 | -0.03 | -0.11 | -0.57 | -0.32 | -0.32 | -0.07 | -0.34 | -0.37 | 0.5 | 0.62 | 0.25 | 0.57 | -0.48 | -0.32 | 0.37 | 0.23 | 0.3 | -0.45 | 0.17 | 0.32 | 1.01 | 0.26 | 0.07 | -0.07 | -0.49 | -0.31 | -0.69 | -0.53 |
Smo83355 (PIP) | -0.41 | -0.24 | -0.36 | -0.52 | 0.11 | -0.27 | -0.73 | -0.07 | -0.2 | -0.35 | 0.06 | -0.21 | 0.83 | -1.12 | -0.81 | 0.1 | -0.35 | -1.7 | 0.19 | 1.53 | 0.23 | -0.17 | -0.2 | -0.53 | 1.6 | 0.3 | 0.0 | 0.5 | -0.36 | 0.04 | -1.38 | -1.27 |
Smo84505 (DRT111) | -0.17 | -0.12 | -0.03 | -0.26 | -0.13 | -0.2 | 0.22 | 0.12 | 0.38 | 0.33 | 0.22 | 0.06 | -0.59 | -0.18 | 0.04 | -0.57 | -0.94 | -0.92 | -0.44 | 1.05 | 0.04 | 0.34 | -0.8 | -0.81 | 1.36 | 0.25 | 0.19 | 0.13 | -1.01 | -0.94 | -0.11 | 0.12 |
Smo84682 (PTS) | -0.59 | -0.65 | -0.15 | -0.08 | 0.12 | 0.32 | 0.52 | 0.27 | 0.07 | 0.0 | -0.43 | -0.5 | -1.73 | -1.58 | 0.14 | -1.76 | -0.4 | -0.53 | 0.19 | 0.97 | 0.37 | 0.49 | 0.11 | 0.21 | 1.75 | -0.54 | -0.29 | 0.01 | -0.47 | -0.14 | -0.77 | -0.38 |
| -0.35 | -0.1 | -0.53 | 0.02 | -0.14 | -0.31 | -0.19 | 0.22 | 0.24 | 0.25 | 0.4 | 0.2 | 0.15 | -0.54 | -0.61 | 0.33 | -0.79 | -0.53 | -0.34 | 1.04 | 1.05 | -0.22 | 0.06 | 0.12 | 0.99 | -0.37 | -1.03 | -1.18 | -0.42 | -0.35 | -0.15 | -0.03 | |
Smo86206 (SUFS) | -0.58 | -0.41 | -0.53 | -0.15 | 0.09 | 0.01 | -0.03 | 0.06 | -0.05 | -0.14 | -0.22 | -0.27 | -0.78 | -0.68 | 0.22 | -0.59 | -0.45 | -0.88 | -0.16 | 0.91 | 0.03 | 0.71 | -0.41 | -0.2 | 1.36 | 0.34 | 0.7 | 0.72 | -0.46 | -0.29 | -0.6 | -0.65 |
Smo89633 (GCR1) | -0.6 | -0.61 | -0.62 | -0.33 | -0.22 | -0.42 | -0.32 | -0.1 | -0.3 | 0.11 | -0.26 | -0.19 | 0.5 | 0.41 | 0.26 | 0.73 | -0.34 | -0.65 | 0.0 | 0.47 | 0.22 | 0.46 | 0.18 | 0.36 | 1.08 | 0.17 | -0.41 | -0.61 | -0.17 | -0.15 | -0.4 | -0.47 |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.