Heatmap: Cluster_246 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Aerial tissue - Light - ZT1
Aerial tissue - Light - ZT3
Aerial tissue - Light - ZT5
Aerial tissue - Light - ZT7
Aerial tissue - Light - ZT9
Aerial tissue - Light - ZT11
Aerial tissue - Dark - ZT1
Aerial tissue - Dark - ZT3
Aerial tissue - Dark - ZT5
Aerial tissue - Dark - ZT7
Aerial tissue - Dark - ZT9
Aerial tissue - Dark - ZT11
Roots
Root elongation and differentiation zone
Root meristematic zone
Aerial roots and rhizophores
Shoot tips
Microphyll
Strobili
Shoot apical meristem - AC
Shoot apical meristem - Core
Shoot apical meristem - P1
Stem - Top
Stem - Bottom
Whole plant
Aerial tissue - Stress - Dark
Aerial tissue - Stress - High light
Aerial tissue - Stress - Cont
Aerial tissue - Stress - 37C 1h
Aerial tissue - Stress - 37C 3h
Aerial tissue - Stress - 4C 1h
Aerial tissue - Stress - 4C 3h
-0.75 -0.13 -0.02 0.5 0.8 0.87 0.4 0.3 -0.49 -0.68 -0.73 -0.89 -1.65 0.48 -0.05 -1.03 0.45 0.89 -0.28 -0.65 -0.07 -3.55 -0.21 -1.09 0.85 0.9 0.88 0.57 -0.62 -1.05 -0.78 -0.85
-0.99 0.3 0.91 0.8 1.54 1.15 0.7 -0.1 0.77 -2.17 -0.52 -0.19 -4.19 0.01 0.71 -2.47 0.14 -1.69 -1.02 -2.79 - - -0.5 -0.59 0.05 0.84 0.72 1.82 -2.11 -1.72 -1.56 -1.87

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.