1. Home
  2. Tools
  3. Expression Heatmap
  4. Results

Heatmap: Cluster_94 (HCCA)

View as: (view zlog-transformed or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Showing raw values)

 Transpose table  Download table
Gene
Aerial tissue - Light - ZT1
Aerial tissue - Light - ZT3
Aerial tissue - Light - ZT5
Aerial tissue - Light - ZT7
Aerial tissue - Light - ZT9
Aerial tissue - Light - ZT11
Aerial tissue - Dark - ZT1
Aerial tissue - Dark - ZT3
Aerial tissue - Dark - ZT5
Aerial tissue - Dark - ZT7
Aerial tissue - Dark - ZT9
Aerial tissue - Dark - ZT11
Roots
Root elongation and differentiation zone
Root meristematic zone
Aerial roots and rhizophores
Shoot tips
Microphyll
Strobili
Shoot apical meristem - AC
Shoot apical meristem - Core
Shoot apical meristem - P1
Stem - Top
Stem - Bottom
Whole plant
Aerial tissue - Stress - Dark
Aerial tissue - Stress - High light
Aerial tissue - Stress - Cont
Aerial tissue - Stress - 37C 1h
Aerial tissue - Stress - 37C 3h
Aerial tissue - Stress - 4C 1h
Aerial tissue - Stress - 4C 3h
0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 1.0 16.45 0.0 0.0 20.26 0.34 3.01 6.04 0.0 0.0 0.0 0.0 1.3 20.73 0.0 0.0 0.0 1.15 2.55 0.0 1.4
11.11 2.6 6.06 11.12 2.98 6.19 9.71 13.61 11.94 31.84 14.25 24.02 89.93 23.0 11.9 122.52 24.07 51.23 75.28 10.32 58.53 0.0 57.08 74.89 154.05 11.96 14.51 4.66 36.11 29.81 23.32 35.6
Smo113596 (SULTR1;3)
 18.23 10.4 7.01 10.19 14.08 12.87 11.71 18.52 12.07 10.94 8.99 8.8 137.28 83.87 12.34 20.79 9.14 16.49 44.81 3.7 8.96 1.66 12.43 18.35 58.14 41.2 30.23 31.21 20.82 16.26 15.99 5.16
47.24 57.39 33.34 44.41 49.04 37.8 44.69 47.17 49.82 52.46 54.49 55.59 86.68 44.79 27.59 123.83 103.79 174.14 105.51 53.17 109.83 37.45 95.86 89.83 254.78 83.06 41.57 51.82 96.85 106.15 105.08 101.19
0.12 0.21 0.0 0.0 0.57 0.17 0.12 0.0 0.55 0.05 0.0 0.01 0.17 0.0 0.19 0.23 0.12 0.39 0.5 0.0 0.0 0.06 3.02 18.79 16.53 0.0 0.1 0.0 0.74 0.72 0.56 0.72
Smo148785 (SYT5)
 31.78 28.54 28.23 34.95 22.29 30.51 20.25 26.95 30.46 24.82 31.74 30.46 185.08 108.89 52.04 105.61 19.78 29.31 55.99 35.15 28.9 0.25 25.5 28.09 117.74 74.28 49.12 46.56 29.9 33.09 21.05 21.65
22.77 20.98 20.59 25.11 24.01 23.57 22.62 29.83 34.56 30.16 29.82 27.12 135.77 61.22 16.75 100.76 23.86 23.17 34.77 6.59 63.97 5.47 23.41 26.22 119.2 74.68 44.74 45.89 29.23 28.12 18.01 21.42
Smo150295 (NUDX19)
 21.09 21.52 20.31 27.36 30.78 27.33 22.31 27.47 24.17 23.62 25.75 22.31 40.95 22.5 12.65 37.26 25.19 20.85 32.75 17.82 22.46 2.31 24.52 24.96 90.2 46.6 38.01 41.32 22.66 23.24 28.34 27.58
Smo159477 (DSO)
 0.04 0.03 0.08 0.0 0.0 0.18 0.02 0.37 0.02 0.0 0.05 0.15 0.0 0.02 0.0 0.02 0.01 0.42 0.2 0.0 0.0 0.0 2.34 14.24 17.84 1.72 0.0 0.0 0.31 0.37 0.47 1.14
13.0 17.64 14.3 12.35 15.0 12.75 10.16 8.06 10.34 10.43 11.75 11.77 44.4 27.33 13.19 46.29 26.65 20.66 33.93 2.86 7.11 5.52 29.55 30.47 103.97 39.68 12.49 17.46 19.49 23.67 12.77 16.47
Smo185136 (ENT3)
 1.59 3.84 9.16 11.57 12.93 7.84 4.05 4.06 3.05 2.08 1.72 1.43 25.01 5.09 0.05 16.31 5.45 10.73 21.88 0.58 0.77 0.16 18.03 17.82 50.43 24.12 11.5 11.57 4.33 4.62 3.24 4.12
Smo230231 (IRT3)
 103.11 141.81 166.79 183.3 197.95 187.49 133.77 118.0 93.25 105.98 86.69 97.3 520.47 134.41 23.78 205.23 133.73 51.83 120.63 50.6 88.61 17.4 174.48 165.32 472.69 96.12 127.75 153.83 96.54 105.15 39.69 43.95
63.43 61.02 68.99 70.1 70.78 71.45 65.47 72.41 71.99 59.19 66.76 52.13 106.21 123.46 79.85 128.68 63.56 47.92 86.34 82.45 57.28 70.14 66.6 60.72 87.29 109.2 88.26 67.54 65.78 64.26 96.89 70.57
33.21 30.49 28.41 28.63 29.04 23.7 26.42 28.92 33.05 31.06 31.26 28.92 69.07 60.19 45.1 66.42 25.91 18.86 30.75 2.67 28.0 18.32 30.76 37.81 51.58 32.64 27.77 29.66 25.86 26.84 22.55 14.76
Smo267610 (STP7)
 6.27 13.32 14.9 25.27 26.75 32.31 24.94 19.18 17.04 12.57 8.14 6.92 22.18 11.77 13.14 40.04 20.99 6.78 23.75 16.27 27.82 0.17 19.61 16.18 81.37 39.7 26.41 30.74 20.49 22.0 9.02 5.3
69.9 71.49 55.04 52.51 55.03 50.37 48.86 56.32 61.49 56.12 55.11 62.86 192.28 140.1 50.75 104.69 50.54 52.66 126.99 1.87 34.29 5.49 88.99 118.19 259.15 44.69 40.17 39.98 52.85 59.86 44.08 44.18
Smo270327 (GDH1)
 11.06 8.28 6.14 7.29 3.87 7.72 7.43 14.64 10.84 16.86 12.29 10.55 124.99 54.9 28.6 49.96 7.53 5.52 41.78 5.85 8.37 6.68 13.27 22.14 65.78 49.68 13.03 12.16 13.71 14.17 3.02 5.61
Smo272294 (GDH1)
 7.99 5.94 9.79 14.02 18.55 12.26 9.35 22.08 15.41 14.03 12.92 9.28 77.02 69.83 27.84 34.69 14.33 3.31 45.37 2.06 17.76 19.65 31.44 47.68 96.62 50.12 14.77 14.76 19.84 22.12 4.49 8.06
17.55 20.27 20.8 36.51 41.63 42.32 32.57 36.85 36.48 31.75 25.91 18.98 59.25 28.91 5.32 55.66 16.12 11.18 30.35 23.58 37.23 13.81 26.12 20.34 110.51 56.87 51.55 55.93 27.5 22.1 15.72 12.94
Smo35623 (SNP33)
 64.63 61.61 66.77 62.28 58.97 65.25 67.06 70.03 70.11 73.81 77.51 66.38 142.31 132.56 49.79 152.62 42.7 45.37 86.83 13.61 62.95 47.93 56.89 65.12 151.19 75.54 64.6 62.84 55.49 56.11 68.26 53.88
0.28 0.14 0.0 0.64 0.0 0.48 0.29 0.91 0.3 0.53 0.26 0.29 10.16 1.23 3.09 8.14 2.25 3.28 5.64 2.0 2.8 3.29 2.88 3.1 18.32 2.67 3.19 1.5 4.4 3.3 1.72 0.63
0.63 0.81 0.16 0.68 0.92 0.72 0.75 1.19 0.75 1.08 1.04 1.26 1.06 0.39 0.91 1.07 1.27 0.11 2.25 0.93 0.54 0.68 1.47 1.65 5.29 1.54 1.07 1.43 1.01 1.58 1.06 0.91
11.29 15.62 12.59 11.24 14.92 12.99 9.42 9.08 9.09 10.22 9.58 10.62 10.75 6.92 11.64 34.51 10.39 5.33 17.76 7.51 18.46 12.28 9.17 11.47 53.1 15.88 18.98 22.38 12.05 14.29 4.43 4.25
Smo406192 (MLO13)
 13.37 7.95 10.31 12.37 14.43 9.26 10.94 21.73 19.59 21.84 24.19 15.44 92.32 51.29 12.36 54.62 3.99 2.04 5.69 2.2 13.11 0.0 7.45 11.15 70.32 54.45 24.55 22.66 8.01 9.32 6.81 5.42
0.64 0.77 0.34 0.41 0.56 0.6 0.38 0.65 0.98 1.26 0.57 0.44 7.07 1.74 1.57 4.9 0.65 0.62 1.87 0.49 2.15 0.1 1.08 1.83 5.6 1.02 1.39 0.82 1.13 1.31 0.93 0.59
9.26 8.69 8.48 6.9 5.73 8.97 6.35 7.84 12.39 9.6 8.67 9.41 24.21 5.4 8.43 23.47 14.85 9.51 25.79 19.08 10.36 17.66 16.94 20.84 59.34 22.88 15.01 15.14 15.71 18.97 16.51 21.66
Smo410445 (CYP709B2)
 7.08 7.04 4.79 6.22 6.86 7.31 6.13 8.8 9.1 7.69 5.77 5.75 18.29 25.58 4.77 14.46 0.85 4.28 1.26 0.51 0.76 0.0 4.51 5.17 21.11 4.54 4.46 7.77 1.24 2.1 0.78 1.42
1.35 0.87 1.27 1.45 1.32 1.22 1.21 2.32 2.03 3.16 2.12 1.71 30.33 3.83 0.44 12.62 0.22 0.26 0.23 0.04 0.9 0.0 0.39 1.55 13.32 4.94 3.28 1.84 0.3 0.49 0.23 0.26
0.38 0.42 0.47 0.79 0.28 0.71 0.69 0.89 0.72 0.89 0.67 0.52 5.49 1.53 0.37 2.56 0.37 0.95 1.24 0.0 0.45 0.03 1.24 1.58 2.77 0.92 0.62 0.31 0.61 0.61 0.4 0.28
2.87 3.28 2.39 3.8 3.73 3.49 1.5 3.07 2.9 1.5 1.9 1.85 23.72 2.14 0.07 15.53 1.3 2.23 2.51 0.36 0.56 0.0 6.35 10.74 11.25 13.06 12.67 13.36 1.99 2.61 1.88 1.77
23.09 27.41 28.62 28.84 32.31 28.93 28.95 27.95 32.43 35.07 28.35 27.73 65.2 78.34 34.87 77.7 18.43 41.55 29.87 14.52 26.42 1.21 31.91 31.85 61.76 44.66 32.8 30.64 21.98 19.99 18.86 20.97
0.01 0.0 0.0 0.02 0.0 0.03 0.07 0.0 0.0 0.03 0.03 0.01 0.45 0.02 0.08 0.16 0.0 0.06 0.15 0.0 0.0 0.0 0.03 0.01 0.31 0.14 0.0 0.06 0.04 0.04 0.0 0.04
0.02 0.0 0.57 0.25 0.11 0.0 0.05 0.18 0.19 0.0 0.18 0.05 4.61 0.17 0.25 1.4 0.58 0.0 1.68 0.0 0.0 0.0 1.87 1.12 5.04 0.89 0.37 0.75 0.21 0.93 0.51 0.05
Smo418378 (APG6)
 0.1 0.02 0.01 0.07 0.0 0.06 0.17 0.11 0.11 0.06 0.07 0.06 0.75 0.08 0.23 0.69 0.45 0.39 0.63 0.41 0.83 0.11 0.57 0.64 1.52 0.1 0.24 0.28 0.45 0.27 0.36 0.46
0.0 0.0 0.0 0.02 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.83 0.26 0.02 0.82 0.14 0.0 0.71 0.0 0.0 0.31 0.07 0.11 0.82 0.07 0.0 0.0 0.1 0.22 0.07 0.23
0.19 0.11 0.05 0.15 0.07 0.2 0.29 0.25 0.34 0.49 0.47 0.34 3.16 0.88 0.88 1.18 0.2 0.13 0.58 0.36 1.33 0.0 0.41 0.11 1.95 1.68 0.23 0.36 0.3 0.28 0.36 0.13
2.58 3.26 2.33 2.66 2.37 2.58 2.55 3.35 2.23 2.78 2.91 2.53 6.81 2.16 4.65 9.19 3.23 2.55 7.43 1.79 8.15 0.66 7.22 10.53 18.08 8.68 9.06 7.57 3.78 4.94 1.79 2.23
43.71 34.41 22.46 15.35 19.25 10.71 2.53 19.25 20.44 31.91 12.71 15.74 733.57 0.16 0.0 335.21 3.74 2.57 7.09 0.0 0.0 0.0 13.62 64.14 590.74 126.68 71.25 14.38 4.93 6.3 3.65 5.12
50.19 64.4 87.62 89.67 94.5 79.23 56.25 69.04 108.35 82.97 70.86 50.43 179.01 56.76 27.97 84.2 47.86 47.19 97.83 55.6 14.59 23.53 120.43 191.59 420.48 47.68 63.45 29.86 48.38 53.68 22.55 28.87
51.19 34.94 22.91 22.3 38.85 20.35 5.18 29.51 24.9 30.14 20.82 17.0 420.7 0.54 0.03 297.34 2.63 0.65 10.26 0.0 0.0 0.0 8.45 44.39 114.13 156.58 151.61 32.24 4.3 6.8 3.34 5.66
14.09 13.26 12.73 13.99 15.29 14.15 15.43 17.28 17.84 19.54 16.81 14.93 23.46 20.26 24.06 29.23 14.18 7.16 20.69 11.92 9.75 8.27 18.3 19.61 36.97 22.73 11.23 13.85 15.35 15.19 13.85 14.55
47.66 47.16 52.09 63.78 66.71 62.07 57.52 62.13 70.41 65.72 63.99 60.33 181.74 103.53 53.83 120.26 57.64 54.21 65.62 40.69 107.99 14.89 59.79 69.86 87.59 62.84 67.23 76.86 59.04 63.76 38.74 41.2
35.23 29.42 29.47 29.24 34.28 22.72 23.96 23.77 33.26 28.31 41.65 30.71 78.74 36.08 32.91 109.17 82.74 100.87 119.94 39.78 85.23 31.14 72.43 81.3 202.31 76.3 61.61 82.53 86.03 86.34 68.88 78.76
23.59 22.18 19.79 16.81 16.12 15.15 15.54 15.36 16.12 14.51 16.37 15.95 45.58 25.2 13.4 55.39 28.38 34.57 24.17 13.9 13.93 11.89 18.47 18.42 52.62 14.77 14.33 16.44 26.44 29.07 12.14 16.61
Smo76289 (GNA1)
 47.24 45.49 30.85 44.91 46.31 39.99 44.56 52.39 45.79 50.95 44.75 48.59 434.88 278.76 56.66 277.84 60.35 114.19 142.82 24.06 95.64 19.07 200.78 658.02 613.23 87.12 70.32 64.6 103.57 130.94 110.25 98.74
Smo77273 (MLO13)
 13.46 7.07 10.03 12.54 13.62 8.42 10.0 18.72 19.2 24.08 21.69 15.17 82.17 32.86 7.45 42.9 3.6 0.88 4.95 0.04 6.0 0.05 6.72 9.37 25.98 44.08 13.98 13.8 9.04 8.06 8.48 5.48
75.37 78.2 78.27 82.84 84.29 88.62 79.59 95.61 92.98 92.76 93.52 92.35 113.62 83.8 60.05 124.42 80.04 73.27 130.8 69.38 95.96 44.05 127.49 135.2 345.7 200.38 140.49 147.75 117.38 123.16 98.05 122.19
2.72 2.56 2.17 3.8 0.0 6.04 5.33 0.0 3.58 1.22 3.55 2.67 115.36 11.8 11.24 208.33 98.69 90.76 139.17 111.65 43.04 52.36 109.17 111.0 295.41 0.0 3.38 13.65 102.81 101.78 159.75 153.12

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)