Heatmap: Cluster_178 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Aerial tissue - Light - ZT1
Aerial tissue - Light - ZT3
Aerial tissue - Light - ZT5
Aerial tissue - Light - ZT7
Aerial tissue - Light - ZT9
Aerial tissue - Light - ZT11
Aerial tissue - Dark - ZT1
Aerial tissue - Dark - ZT3
Aerial tissue - Dark - ZT5
Aerial tissue - Dark - ZT7
Aerial tissue - Dark - ZT9
Aerial tissue - Dark - ZT11
Roots
Root elongation and differentiation zone
Root meristematic zone
Aerial roots and rhizophores
Shoot tips
Microphyll
Strobili
Shoot apical meristem - AC
Shoot apical meristem - Core
Shoot apical meristem - P1
Stem - Top
Stem - Bottom
Whole plant
Aerial tissue - Stress - Dark
Aerial tissue - Stress - High light
Aerial tissue - Stress - Cont
Aerial tissue - Stress - 37C 1h
Aerial tissue - Stress - 37C 3h
Aerial tissue - Stress - 4C 1h
Aerial tissue - Stress - 4C 3h
Smo426355 (CRK15)
-0.13 -0.19 -0.94 -2.01 -1.33 -0.74 -0.72 -0.44 0.58 -0.28 0.28 -0.49 0.33 -0.4 -0.82 0.0 0.94 1.98 -0.32 -4.01 1.16 - 0.04 -0.81 -0.13 0.82 -0.31 -0.47 1.0 0.43 -0.42 -1.23
Smo59700 (NPQ7)
-0.19 -0.18 0.11 0.05 -1.55 0.01 -0.53 -0.75 0.01 -0.48 -0.39 -0.59 -1.01 -0.75 -0.16 -0.88 0.56 1.72 -0.12 -2.7 -0.07 -1.17 -0.94 -1.27 - 0.62 0.93 1.63 0.13 0.51 0.24 0.48

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.