Heatmap: Cluster_169 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Aerial tissue - Light - ZT1
Aerial tissue - Light - ZT3
Aerial tissue - Light - ZT5
Aerial tissue - Light - ZT7
Aerial tissue - Light - ZT9
Aerial tissue - Light - ZT11
Aerial tissue - Dark - ZT1
Aerial tissue - Dark - ZT3
Aerial tissue - Dark - ZT5
Aerial tissue - Dark - ZT7
Aerial tissue - Dark - ZT9
Aerial tissue - Dark - ZT11
Roots
Root elongation and differentiation zone
Root meristematic zone
Aerial roots and rhizophores
Shoot tips
Microphyll
Strobili
Shoot apical meristem - AC
Shoot apical meristem - Core
Shoot apical meristem - P1
Stem - Top
Stem - Bottom
Whole plant
Aerial tissue - Stress - Dark
Aerial tissue - Stress - High light
Aerial tissue - Stress - Cont
Aerial tissue - Stress - 37C 1h
Aerial tissue - Stress - 37C 3h
Aerial tissue - Stress - 4C 1h
Aerial tissue - Stress - 4C 3h
-0.68 -1.76 -2.51 0.08 -0.84 -0.34 0.25 0.22 1.72 -1.27 1.13 -1.14 -0.07 1.53 -1.75 1.46 -0.78 -0.04 2.53 -1.83 -3.16 - -1.44 -1.27 - 1.1 -1.56 - -0.58 -0.54 -1.18 -2.83
Smo417069 (PDC2)
- - -1.37 - - - - - 2.67 - 0.74 - - 2.41 - - - 1.39 0.77 - - - - - - 3.16 - - - - 0.79 1.71
-2.74 -3.17 -2.86 -2.08 0.04 - -0.56 -3.42 2.13 0.07 0.9 - 2.63 0.1 - 0.24 -2.97 - 2.35 - - - - -2.04 0.92 2.15 - - -1.08 -0.38 -0.69 -3.08

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.