Heatmap: Cluster_219 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Aerial tissue - Light - ZT1
Aerial tissue - Light - ZT3
Aerial tissue - Light - ZT5
Aerial tissue - Light - ZT7
Aerial tissue - Light - ZT9
Aerial tissue - Light - ZT11
Aerial tissue - Dark - ZT1
Aerial tissue - Dark - ZT3
Aerial tissue - Dark - ZT5
Aerial tissue - Dark - ZT7
Aerial tissue - Dark - ZT9
Aerial tissue - Dark - ZT11
Roots
Root elongation and differentiation zone
Root meristematic zone
Aerial roots and rhizophores
Shoot tips
Microphyll
Strobili
Shoot apical meristem - AC
Shoot apical meristem - Core
Shoot apical meristem - P1
Stem - Top
Stem - Bottom
Whole plant
Aerial tissue - Stress - Dark
Aerial tissue - Stress - High light
Aerial tissue - Stress - Cont
Aerial tissue - Stress - 37C 1h
Aerial tissue - Stress - 37C 3h
Aerial tissue - Stress - 4C 1h
Aerial tissue - Stress - 4C 3h
-1.67 -1.29 -4.28 -1.88 -0.33 -4.01 -1.45 -4.2 -2.99 -1.13 -1.24 -1.71 -2.79 -3.72 -1.29 -1.16 -0.7 -1.83 4.16 - 1.82 1.28 -3.98 - - -0.26 -1.59 -0.67 -1.4 -1.91 -3.95 -
Smo83391 (GME)
-5.02 -1.87 -2.86 -3.33 -1.81 -0.12 -0.62 -1.5 -3.13 -4.53 -3.41 -0.65 -3.41 -2.09 1.0 -1.21 - -0.24 4.17 -0.96 1.9 -0.47 -1.45 -2.05 - -6.19 - - -1.05 -0.66 - -
-0.55 -0.73 -0.73 -0.88 -0.38 -0.71 -0.42 -0.68 -0.52 -0.46 -0.69 -0.58 -0.24 -1.52 0.34 -0.83 -1.59 -2.04 3.18 -1.16 1.31 1.36 -2.32 -1.18 -1.56 0.7 -0.37 -0.58 -1.78 -1.8 -0.38 -0.95

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.