Heatmap: Cluster_158 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Aerial tissue - Light - ZT1
Aerial tissue - Light - ZT3
Aerial tissue - Light - ZT5
Aerial tissue - Light - ZT7
Aerial tissue - Light - ZT9
Aerial tissue - Light - ZT11
Aerial tissue - Dark - ZT1
Aerial tissue - Dark - ZT3
Aerial tissue - Dark - ZT5
Aerial tissue - Dark - ZT7
Aerial tissue - Dark - ZT9
Aerial tissue - Dark - ZT11
Roots
Root elongation and differentiation zone
Root meristematic zone
Aerial roots and rhizophores
Shoot tips
Microphyll
Strobili
Shoot apical meristem - AC
Shoot apical meristem - Core
Shoot apical meristem - P1
Stem - Top
Stem - Bottom
Whole plant
Aerial tissue - Stress - Dark
Aerial tissue - Stress - High light
Aerial tissue - Stress - Cont
Aerial tissue - Stress - 37C 1h
Aerial tissue - Stress - 37C 3h
Aerial tissue - Stress - 4C 1h
Aerial tissue - Stress - 4C 3h
-0.97 -2.0 -2.57 -1.19 -1.14 0.05 0.36 0.37 0.66 0.44 -0.46 -1.24 -1.47 2.23 0.4 2.46 -1.55 -1.72 0.2 - - - -1.98 -0.65 -2.15 0.08 0.7 0.78 -0.17 0.09 -0.51 -0.68
-1.4 0.03 -0.04 -0.44 -0.09 -0.11 -0.26 -0.37 -0.71 1.02 -1.12 -0.41 0.21 2.5 - 2.09 -0.94 -1.14 0.7 -2.87 - - -0.58 -0.95 - 0.98 1.03 -0.46 -0.61 -1.23 -0.88 -2.26

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.