Heatmap: Cluster_214 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Aerial tissue - Light - ZT1
Aerial tissue - Light - ZT3
Aerial tissue - Light - ZT5
Aerial tissue - Light - ZT7
Aerial tissue - Light - ZT9
Aerial tissue - Light - ZT11
Aerial tissue - Dark - ZT1
Aerial tissue - Dark - ZT3
Aerial tissue - Dark - ZT5
Aerial tissue - Dark - ZT7
Aerial tissue - Dark - ZT9
Aerial tissue - Dark - ZT11
Roots
Root elongation and differentiation zone
Root meristematic zone
Aerial roots and rhizophores
Shoot tips
Microphyll
Strobili
Shoot apical meristem - AC
Shoot apical meristem - Core
Shoot apical meristem - P1
Stem - Top
Stem - Bottom
Whole plant
Aerial tissue - Stress - Dark
Aerial tissue - Stress - High light
Aerial tissue - Stress - Cont
Aerial tissue - Stress - 37C 1h
Aerial tissue - Stress - 37C 3h
Aerial tissue - Stress - 4C 1h
Aerial tissue - Stress - 4C 3h
-2.5 -3.25 -2.62 -1.8 -1.62 -1.38 -0.79 -1.83 -1.36 -1.05 -1.14 -1.65 -0.35 -1.54 1.15 -0.71 -1.24 -1.32 4.04 1.6 -3.13 0.52 -4.3 -2.95 -2.49 -1.46 -1.4 -1.82 -2.08 -1.84 -2.1 -2.73
Smo82638 (SDH2-1)
-3.39 - -3.62 - - - -3.34 -2.55 -3.59 -1.25 - -1.79 - -2.14 -2.32 0.38 -0.31 -1.13 3.94 1.78 - - 1.07 0.09 0.99 -1.14 -0.78 -0.97 -1.28 -1.18 -0.41 -0.7

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.