Heatmap: Cluster_238 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Aerial tissue - Light - ZT1
Aerial tissue - Light - ZT3
Aerial tissue - Light - ZT5
Aerial tissue - Light - ZT7
Aerial tissue - Light - ZT9
Aerial tissue - Light - ZT11
Aerial tissue - Dark - ZT1
Aerial tissue - Dark - ZT3
Aerial tissue - Dark - ZT5
Aerial tissue - Dark - ZT7
Aerial tissue - Dark - ZT9
Aerial tissue - Dark - ZT11
Roots
Root elongation and differentiation zone
Root meristematic zone
Aerial roots and rhizophores
Shoot tips
Microphyll
Strobili
Shoot apical meristem - AC
Shoot apical meristem - Core
Shoot apical meristem - P1
Stem - Top
Stem - Bottom
Whole plant
Aerial tissue - Stress - Dark
Aerial tissue - Stress - High light
Aerial tissue - Stress - Cont
Aerial tissue - Stress - 37C 1h
Aerial tissue - Stress - 37C 3h
Aerial tissue - Stress - 4C 1h
Aerial tissue - Stress - 4C 3h
-0.12 0.27 0.2 0.26 0.05 0.28 0.46 0.47 0.07 0.33 0.35 -0.11 -1.64 -1.28 -1.53 -1.5 -0.4 -1.19 3.23 -5.43 - - -0.69 -0.7 -2.68 -0.45 -0.12 -0.35 -0.82 -0.75 -1.06 -0.96
-0.0 1.07 0.42 1.01 -0.47 0.78 0.22 -0.87 0.21 -1.37 0.62 0.17 - - -5.22 -3.39 -2.87 -2.41 3.81 - - - - -4.48 - -1.41 -0.87 0.54 -3.56 -3.52 -4.55 -4.62
Smo85183 (GH9B14)
0.5 0.56 0.58 0.27 0.36 0.29 -0.68 -0.43 -0.02 -0.64 -0.34 -0.27 -5.36 -6.22 -7.85 -3.89 0.68 -0.89 3.56 - - - -1.5 -1.73 -0.37 -0.87 -1.13 -0.82 -0.5 -0.1 -1.77 -1.63

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.