Heatmap: Cluster_181 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Aerial tissue - Light - ZT1
Aerial tissue - Light - ZT3
Aerial tissue - Light - ZT5
Aerial tissue - Light - ZT7
Aerial tissue - Light - ZT9
Aerial tissue - Light - ZT11
Aerial tissue - Dark - ZT1
Aerial tissue - Dark - ZT3
Aerial tissue - Dark - ZT5
Aerial tissue - Dark - ZT7
Aerial tissue - Dark - ZT9
Aerial tissue - Dark - ZT11
Roots
Root elongation and differentiation zone
Root meristematic zone
Aerial roots and rhizophores
Shoot tips
Microphyll
Strobili
Shoot apical meristem - AC
Shoot apical meristem - Core
Shoot apical meristem - P1
Stem - Top
Stem - Bottom
Whole plant
Aerial tissue - Stress - Dark
Aerial tissue - Stress - High light
Aerial tissue - Stress - Cont
Aerial tissue - Stress - 37C 1h
Aerial tissue - Stress - 37C 3h
Aerial tissue - Stress - 4C 1h
Aerial tissue - Stress - 4C 3h
-0.52 -1.29 -1.19 0.4 0.04 1.16 1.24 1.09 1.24 0.32 0.08 -0.05 -1.53 -1.93 0.59 -1.22 -0.71 -1.9 -0.54 -0.54 - -3.58 -0.56 -1.57 - 0.02 1.46 1.06 -0.05 0.27 0.11 -0.43
Smo99975 (LPA66)
-0.72 -1.22 0.06 -0.38 0.28 0.35 1.1 0.9 1.24 0.34 -0.14 0.3 -1.12 -1.97 -0.26 -0.74 -0.32 -1.87 -0.54 -0.48 -0.03 -3.98 -0.83 -0.63 -2.05 -0.36 1.11 1.38 -0.1 -0.04 0.48 -0.1

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.