Heatmap: Cluster_242 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Aerial tissue - Light - ZT1
Aerial tissue - Light - ZT3
Aerial tissue - Light - ZT5
Aerial tissue - Light - ZT7
Aerial tissue - Light - ZT9
Aerial tissue - Light - ZT11
Aerial tissue - Dark - ZT1
Aerial tissue - Dark - ZT3
Aerial tissue - Dark - ZT5
Aerial tissue - Dark - ZT7
Aerial tissue - Dark - ZT9
Aerial tissue - Dark - ZT11
Roots
Root elongation and differentiation zone
Root meristematic zone
Aerial roots and rhizophores
Shoot tips
Microphyll
Strobili
Shoot apical meristem - AC
Shoot apical meristem - Core
Shoot apical meristem - P1
Stem - Top
Stem - Bottom
Whole plant
Aerial tissue - Stress - Dark
Aerial tissue - Stress - High light
Aerial tissue - Stress - Cont
Aerial tissue - Stress - 37C 1h
Aerial tissue - Stress - 37C 3h
Aerial tissue - Stress - 4C 1h
Aerial tissue - Stress - 4C 3h
0.18 -0.01 0.09 0.04 0.09 0.3 0.28 0.14 0.03 0.04 0.17 -0.04 0.23 -0.07 -0.25 0.39 -0.31 -0.58 -0.06 -1.47 -1.87 0.11 -0.17 -0.06 -1.62 0.83 0.67 0.54 -0.26 -0.23 -0.01 -0.12
0.3 0.37 0.35 0.32 0.34 0.1 -0.01 0.18 0.11 0.13 0.1 -0.04 0.45 0.15 -0.07 0.7 -0.89 -1.15 0.21 -4.33 -4.29 0.17 -0.1 -0.21 -4.74 0.71 0.68 0.76 -0.45 -0.24 -0.36 -0.43

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.