Heatmap: Cluster_228 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Aerial tissue - Light - ZT1
Aerial tissue - Light - ZT3
Aerial tissue - Light - ZT5
Aerial tissue - Light - ZT7
Aerial tissue - Light - ZT9
Aerial tissue - Light - ZT11
Aerial tissue - Dark - ZT1
Aerial tissue - Dark - ZT3
Aerial tissue - Dark - ZT5
Aerial tissue - Dark - ZT7
Aerial tissue - Dark - ZT9
Aerial tissue - Dark - ZT11
Roots
Root elongation and differentiation zone
Root meristematic zone
Aerial roots and rhizophores
Shoot tips
Microphyll
Strobili
Shoot apical meristem - AC
Shoot apical meristem - Core
Shoot apical meristem - P1
Stem - Top
Stem - Bottom
Whole plant
Aerial tissue - Stress - Dark
Aerial tissue - Stress - High light
Aerial tissue - Stress - Cont
Aerial tissue - Stress - 37C 1h
Aerial tissue - Stress - 37C 3h
Aerial tissue - Stress - 4C 1h
Aerial tissue - Stress - 4C 3h
-1.03 -0.29 -0.97 -2.07 -1.49 -0.34 -1.81 0.53 -0.65 -0.25 -0.11 -0.03 -0.06 -0.58 -0.54 0.24 -0.65 0.55 0.26 -2.11 - - -1.36 -1.37 1.26 2.06 0.19 - 0.42 -0.83 1.33 1.91
Smo75785 (RNS1)
-0.84 -2.07 -2.87 -0.66 -1.07 0.01 0.49 1.51 0.23 -0.81 0.9 0.03 -0.74 0.62 -2.05 -0.65 -1.84 -0.08 0.71 - - - -0.1 -0.67 1.12 2.05 0.14 - -0.51 -0.64 0.91 0.98

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.