1. Home
  2. Tools
  3. Expression Heatmap
  4. Results

Heatmap: Cluster_92 (HCCA)

View as: (view zlog-transformed or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Showing raw values)

 Transpose table  Download table
Gene
Aerial tissue - Light - ZT1
Aerial tissue - Light - ZT3
Aerial tissue - Light - ZT5
Aerial tissue - Light - ZT7
Aerial tissue - Light - ZT9
Aerial tissue - Light - ZT11
Aerial tissue - Dark - ZT1
Aerial tissue - Dark - ZT3
Aerial tissue - Dark - ZT5
Aerial tissue - Dark - ZT7
Aerial tissue - Dark - ZT9
Aerial tissue - Dark - ZT11
Roots
Root elongation and differentiation zone
Root meristematic zone
Aerial roots and rhizophores
Shoot tips
Microphyll
Strobili
Shoot apical meristem - AC
Shoot apical meristem - Core
Shoot apical meristem - P1
Stem - Top
Stem - Bottom
Whole plant
Aerial tissue - Stress - Dark
Aerial tissue - Stress - High light
Aerial tissue - Stress - Cont
Aerial tissue - Stress - 37C 1h
Aerial tissue - Stress - 37C 3h
Aerial tissue - Stress - 4C 1h
Aerial tissue - Stress - 4C 3h
Smo109804 (PERK1)
 3.21 2.92 2.22 3.4 2.27 3.01 1.33 2.79 4.13 3.87 3.5 3.4 0.0 0.0 0.01 0.11 0.91 1.48 2.57 0.0 0.19 0.41 0.54 0.34 1.26 4.95 3.62 2.3 0.93 0.6 1.98 1.22
22.82 20.67 14.74 13.83 10.05 10.1 10.73 11.93 9.7 14.49 11.7 13.54 7.53 39.1 18.21 22.92 15.98 2.5 24.25 0.26 0.47 0.0 16.07 14.25 6.25 13.55 13.27 16.37 16.65 18.09 23.44 10.39
0.02 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.04 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.12 0.0 0.0 0.0 0.0 0.0 0.0
Smo115388 (GLIP7)
 13.65 13.69 7.01 3.38 4.79 5.74 5.65 7.64 8.03 7.79 7.38 6.7 0.05 0.0 0.0 0.2 29.45 10.08 13.25 0.0 0.2 0.0 51.57 17.53 8.66 6.28 0.06 0.39 41.83 19.71 35.11 7.96
0.0 0.04 0.81 0.56 0.17 0.76 0.76 0.0 1.11 0.25 0.51 0.0 0.0 0.01 2.88 0.0 0.19 0.0 0.0 0.0 2.43 0.0 0.03 0.11 1.71 0.69 0.77 0.0 0.0 0.0 0.34 0.0
0.0 0.04 0.81 0.56 0.17 0.76 0.76 0.0 1.11 0.25 0.51 0.0 0.0 0.01 2.88 0.0 0.19 0.0 0.0 0.0 2.43 0.0 0.03 0.11 1.71 0.69 0.77 0.0 0.0 0.0 0.34 0.0
0.0 0.04 0.81 0.56 0.17 0.76 0.76 0.0 1.11 0.25 0.51 0.0 0.0 0.01 2.88 0.0 0.19 0.0 0.0 0.0 2.43 0.0 0.03 0.11 1.71 0.69 0.77 0.0 0.0 0.0 0.34 0.0
0.0 0.04 0.81 0.56 0.17 0.76 0.76 0.0 1.11 0.25 0.51 0.0 0.0 0.01 2.88 0.0 0.19 0.0 0.0 0.0 2.43 0.0 0.03 0.11 1.71 0.69 0.77 0.0 0.0 0.0 0.34 0.0
0.0 0.04 0.81 0.56 0.17 0.76 0.76 0.0 1.11 0.25 0.51 0.0 0.0 0.01 2.88 0.0 0.19 0.0 0.0 0.0 2.43 0.0 0.03 0.11 1.71 0.69 0.77 0.0 0.0 0.0 0.34 0.0
0.0 0.0 0.0 0.0 0.0 0.06 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.04 0.0 0.06 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
0.04 0.08 0.15 0.25 0.14 0.1 0.14 0.46 0.24 0.08 0.15 0.18 0.0 0.0 0.0 0.06 0.0 0.28 0.06 0.0 0.0 0.0 0.0 0.0 0.0 0.11 0.42 0.0 0.0 0.0 0.0 0.0
1.99 2.03 1.97 1.43 0.65 1.63 1.4 2.83 2.53 3.04 2.38 2.12 0.68 0.49 0.0 1.09 1.18 1.39 1.91 0.97 2.12 0.0 2.25 4.33 7.02 7.33 1.85 1.96 1.18 1.14 1.71 0.99
17.05 17.92 19.0 17.85 15.44 17.65 15.36 16.73 18.52 17.12 17.57 15.27 2.35 5.7 14.08 4.58 24.24 14.51 26.47 6.8 4.13 9.65 27.34 20.35 21.57 30.67 18.63 17.96 29.48 27.71 23.11 17.42
152.91 114.28 80.73 61.88 63.81 56.35 49.04 94.25 102.34 137.32 149.84 157.57 170.19 137.49 67.89 101.84 98.1 95.1 183.02 8.03 57.13 25.53 98.86 104.07 31.85 305.09 71.83 40.59 149.89 132.73 150.81 213.75
Smo173133 (4CL3)
 1.32 0.94 1.91 3.28 5.1 4.0 1.82 0.91 1.69 1.53 1.22 1.3 0.57 0.86 0.75 2.83 1.26 1.33 7.52 0.15 0.1 0.19 0.3 0.59 0.66 1.99 0.44 0.48 1.07 0.85 0.52 0.37
0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.09 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
Smo229863 (KUP11)
 20.95 10.19 12.23 15.45 16.38 13.44 19.49 25.57 19.0 28.55 20.9 16.34 11.65 19.0 9.43 11.2 15.1 6.79 26.51 0.62 7.68 0.54 15.76 13.37 11.39 13.97 8.38 9.67 21.54 20.43 32.68 19.31
Smo229868 (OPT4)
 21.75 24.58 25.39 27.0 28.25 25.46 22.58 22.04 26.13 24.82 24.0 22.65 5.34 2.44 4.71 17.24 18.05 11.06 45.07 8.88 6.31 0.84 48.95 49.61 19.74 49.55 12.58 15.83 19.07 15.95 14.1 9.56
1.51 1.75 0.49 0.49 0.89 0.92 0.29 1.73 0.55 0.24 1.19 0.71 0.75 9.26 0.58 1.05 5.53 11.31 4.87 15.09 14.83 0.0 6.46 4.92 24.78 4.06 3.44 0.18 4.35 2.26 3.47 1.71
110.47 174.93 267.53 267.07 228.36 181.4 386.62 271.79 212.3 225.03 132.41 106.85 66.98 215.11 50.42 163.61 283.14 101.19 70.01 10.08 83.25 1.34 230.72 202.01 391.17 245.01 162.05 153.14 153.87 122.23 381.61 210.8
99.02 117.46 161.75 162.83 126.98 111.32 257.61 204.14 144.97 159.41 113.64 103.22 16.43 192.87 44.58 105.54 177.46 121.51 51.12 1.79 63.28 0.39 107.45 78.05 111.04 171.16 65.77 92.17 116.28 96.42 232.48 131.35
0.72 0.63 0.54 0.0 0.0 0.73 0.0 0.0 0.0 0.0 0.0 1.3 0.29 0.0 0.0 0.0 1.66 0.0 1.63 0.0 0.0 0.0 3.79 0.0 0.0 1.4 0.0 0.0 2.43 1.75 0.9 0.0
0.1 0.0 0.0 0.0 0.11 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.13 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.09 0.0 0.09
Smo402768 (PNG1)
 0.11 0.35 0.38 0.91 0.99 0.57 0.7 1.09 0.05 0.18 0.07 0.15 0.36 0.34 1.46 1.25 0.42 0.06 0.32 0.47 0.0 0.0 0.88 2.2 1.65 3.62 0.96 0.31 0.74 0.4 0.26 0.13
0.79 1.98 0.36 0.32 0.31 0.06 0.05 0.0 0.56 0.09 0.0 0.22 1.36 4.14 1.84 3.19 0.64 0.09 0.73 0.0 0.0 0.0 0.23 0.4 0.25 0.5 0.0 0.0 0.16 0.34 1.35 0.16
0.0 0.0 0.05 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.06 0.06 0.0 0.06 0.07 0.45 0.0 0.0 0.0 0.25 0.0 0.32 0.0 0.06 0.0 0.0 0.0
0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.02 0.0 0.03 0.0 0.0 0.0 0.03 0.06 0.0 0.0 0.0 0.0 0.06 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
0.04 0.09 0.03 0.0 0.09 0.0 0.0 0.0 0.0 0.0 0.04 0.03 0.0 0.06 0.04 0.0 0.04 0.05 0.02 0.0 0.0 0.16 0.03 0.09 0.0 0.11 0.0 0.21 0.02 0.03 0.03 0.02
Smo41460 (ERD4)
 68.34 60.96 62.04 54.55 53.28 50.69 64.32 64.29 74.71 85.24 76.76 67.04 41.76 51.6 20.64 93.9 74.27 59.9 72.47 21.93 19.87 9.5 67.94 62.65 16.34 67.11 46.53 40.67 77.54 87.47 183.83 120.78
0.0 0.0 0.0 0.03 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.08 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.19 0.1 0.0 0.0 0.0 0.0 0.0 0.0
0.18 0.0 0.04 0.08 0.19 0.0 0.05 0.08 0.56 0.0 0.0 0.14 0.0 0.0 0.0 0.05 0.1 0.19 0.49 0.0 0.0 0.0 0.14 0.05 2.55 0.31 0.12 0.24 0.0 0.05 0.0 0.0
0.0 0.0 0.0 0.0 0.0 0.0 0.03 0.0 0.0 0.05 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
3.14 3.61 5.75 4.63 1.06 4.07 3.54 0.9 3.11 2.28 1.46 2.93 0.19 7.97 0.13 1.02 3.62 14.54 6.0 0.0 4.86 0.3 3.79 2.32 9.08 7.21 2.72 1.78 13.7 7.74 16.59 5.69
Smo424516 (UBP12)
 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.04 0.0 0.0 0.0 0.0 0.0 0.04 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.01 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.01 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
0.0 0.0 0.0 0.36 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.1 0.0 0.11 0.1 0.09 0.52 0.36 0.66 1.07 0.0 0.0 0.0 1.03 0.0 0.0 0.0 0.0 0.18 0.0 0.08
0.01 0.0 0.0 0.0 0.0 0.0 0.0 0.07 0.0 0.02 0.0 0.0 0.0 0.0 0.0 0.0 0.08 0.0 0.04 0.0 0.0 0.0 0.04 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
3.51 1.36 1.0 1.21 1.83 1.45 0.58 2.23 2.46 6.31 2.49 5.29 5.82 1.52 1.19 10.22 8.4 25.89 12.06 7.78 5.77 0.64 6.24 11.63 32.78 5.52 2.03 3.7 17.25 12.74 10.66 8.8
Smo444039 (FaTA)
 15.81 11.11 11.75 11.47 11.35 10.95 9.77 12.36 14.61 15.97 19.05 18.6 18.92 23.53 27.44 23.12 12.76 3.55 23.94 8.41 3.76 0.4 15.06 15.7 16.49 47.73 27.08 24.84 10.93 12.1 17.11 22.0
693.32 780.16 867.58 732.34 668.38 529.74 1186.84 1011.81 735.96 822.85 518.54 473.61 80.78 112.12 23.04 178.82 701.53 430.15 295.15 2.63 182.53 1.67 776.14 807.02 1094.61 1416.05 532.52 570.12 653.97 562.02 1653.62 869.13
63.7 49.8 27.08 18.42 24.9 22.07 18.09 19.67 11.24 25.59 16.04 15.77 152.8 175.83 8.14 196.49 23.8 68.88 101.8 0.0 80.29 0.56 48.24 49.47 87.58 124.69 211.47 67.49 76.44 50.32 141.48 58.28
0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.04 0.04 0.0 0.05 0.0 0.0 0.06 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
4.29 4.96 3.67 5.27 5.71 6.66 7.44 7.71 8.93 9.5 7.32 5.6 0.33 0.8 1.63 1.73 3.66 0.89 2.57 17.74 16.67 0.43 2.64 2.07 11.11 9.95 7.93 7.95 2.96 2.77 3.3 3.43
Smo78325 (LAX3)
 43.08 32.36 35.61 40.94 36.03 35.6 49.64 59.83 65.98 64.92 67.2 58.6 44.61 42.27 1.25 29.01 44.96 31.33 43.25 20.26 89.38 61.49 18.73 12.47 30.52 85.02 31.17 29.18 51.86 50.63 52.04 51.35
19.25 15.25 14.87 17.26 16.56 19.99 23.64 20.95 21.86 28.24 22.26 17.66 11.87 17.0 13.27 15.0 14.09 16.7 37.26 11.86 21.43 18.11 16.43 24.23 14.28 35.14 20.73 17.67 14.53 13.28 17.24 12.27
1.83 3.41 2.12 2.26 2.87 2.78 2.27 4.08 3.69 1.53 4.57 2.27 2.91 0.64 0.61 2.05 1.87 3.31 6.46 4.38 4.41 0.19 1.53 2.48 1.84 4.38 4.84 1.75 3.36 2.55 4.59 3.3

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)