Heatmap: Cluster_211 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Aerial tissue - Light - ZT1
Aerial tissue - Light - ZT3
Aerial tissue - Light - ZT5
Aerial tissue - Light - ZT7
Aerial tissue - Light - ZT9
Aerial tissue - Light - ZT11
Aerial tissue - Dark - ZT1
Aerial tissue - Dark - ZT3
Aerial tissue - Dark - ZT5
Aerial tissue - Dark - ZT7
Aerial tissue - Dark - ZT9
Aerial tissue - Dark - ZT11
Roots
Root elongation and differentiation zone
Root meristematic zone
Aerial roots and rhizophores
Shoot tips
Microphyll
Strobili
Shoot apical meristem - AC
Shoot apical meristem - Core
Shoot apical meristem - P1
Stem - Top
Stem - Bottom
Whole plant
Aerial tissue - Stress - Dark
Aerial tissue - Stress - High light
Aerial tissue - Stress - Cont
Aerial tissue - Stress - 37C 1h
Aerial tissue - Stress - 37C 3h
Aerial tissue - Stress - 4C 1h
Aerial tissue - Stress - 4C 3h
0.49 0.1 -0.73 0.38 -0.15 0.82 0.47 -0.99 0.07 0.02 0.57 0.3 -2.96 -3.6 -4.51 -0.15 -4.09 3.39 -0.51 -2.74 -0.5 - -0.16 -0.65 -0.98 - -1.58 - -0.32 -0.85 -0.71 -0.63
-0.44 0.17 0.84 0.5 1.13 0.91 0.96 0.4 0.9 0.09 0.24 -0.23 -6.08 -6.14 -6.95 -7.34 -2.35 3.72 -2.51 - - - -4.13 -5.6 -4.28 -4.2 -2.31 -1.76 -4.63 -2.96 -3.13 -3.39

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.