Heatmap: Cluster_224 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Aerial tissue - Light - ZT1
Aerial tissue - Light - ZT3
Aerial tissue - Light - ZT5
Aerial tissue - Light - ZT7
Aerial tissue - Light - ZT9
Aerial tissue - Light - ZT11
Aerial tissue - Dark - ZT1
Aerial tissue - Dark - ZT3
Aerial tissue - Dark - ZT5
Aerial tissue - Dark - ZT7
Aerial tissue - Dark - ZT9
Aerial tissue - Dark - ZT11
Roots
Root elongation and differentiation zone
Root meristematic zone
Aerial roots and rhizophores
Shoot tips
Microphyll
Strobili
Shoot apical meristem - AC
Shoot apical meristem - Core
Shoot apical meristem - P1
Stem - Top
Stem - Bottom
Whole plant
Aerial tissue - Stress - Dark
Aerial tissue - Stress - High light
Aerial tissue - Stress - Cont
Aerial tissue - Stress - 37C 1h
Aerial tissue - Stress - 37C 3h
Aerial tissue - Stress - 4C 1h
Aerial tissue - Stress - 4C 3h
- -2.4 -4.22 -4.86 - -1.99 -4.94 -3.34 - -5.2 -3.02 -3.3 0.1 -2.12 -3.18 -0.14 -1.34 -0.94 4.39 -0.91 1.5 - -1.73 -1.74 0.33 -1.4 - - -1.84 -0.94 -2.2 -1.68
- - - - - - - - - - - - - 1.76 - 1.42 -1.53 -1.0 4.63 - - - - - - - - - - - -1.3 -
-4.8 -3.99 -5.14 -3.43 - -2.73 -5.46 -4.76 -3.66 -2.51 -4.39 -4.89 -3.63 1.41 -0.91 0.9 - -5.69 4.56 - 1.08 - -6.22 -4.07 - -5.24 - -3.12 -5.46 -2.88 - -4.12

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.