Heatmap: Cluster_194 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Aerial tissue - Light - ZT1
Aerial tissue - Light - ZT3
Aerial tissue - Light - ZT5
Aerial tissue - Light - ZT7
Aerial tissue - Light - ZT9
Aerial tissue - Light - ZT11
Aerial tissue - Dark - ZT1
Aerial tissue - Dark - ZT3
Aerial tissue - Dark - ZT5
Aerial tissue - Dark - ZT7
Aerial tissue - Dark - ZT9
Aerial tissue - Dark - ZT11
Roots
Root elongation and differentiation zone
Root meristematic zone
Aerial roots and rhizophores
Shoot tips
Microphyll
Strobili
Shoot apical meristem - AC
Shoot apical meristem - Core
Shoot apical meristem - P1
Stem - Top
Stem - Bottom
Whole plant
Aerial tissue - Stress - Dark
Aerial tissue - Stress - High light
Aerial tissue - Stress - Cont
Aerial tissue - Stress - 37C 1h
Aerial tissue - Stress - 37C 3h
Aerial tissue - Stress - 4C 1h
Aerial tissue - Stress - 4C 3h
-1.44 -2.68 -2.2 -1.2 -0.83 0.3 0.31 0.25 -0.55 0.23 -0.99 -0.83 -3.44 -2.77 -0.98 -2.71 0.17 -0.12 3.06 -1.86 -1.61 -2.19 0.03 -0.84 0.3 -0.51 0.96 1.11 0.11 0.49 -0.18 -0.74
-0.54 -1.49 -1.17 -1.06 -0.1 0.25 0.59 0.44 0.44 0.38 -0.63 -0.41 -2.24 -2.27 -1.17 -1.52 -0.02 -0.79 3.07 -2.17 -1.93 -0.48 -1.15 -1.13 -0.04 -0.55 0.53 0.72 -0.2 -0.06 -0.79 -0.82

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.