Heatmap: Cluster_126 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Aerial tissue - Light - ZT1
Aerial tissue - Light - ZT3
Aerial tissue - Light - ZT5
Aerial tissue - Light - ZT7
Aerial tissue - Light - ZT9
Aerial tissue - Light - ZT11
Aerial tissue - Dark - ZT1
Aerial tissue - Dark - ZT3
Aerial tissue - Dark - ZT5
Aerial tissue - Dark - ZT7
Aerial tissue - Dark - ZT9
Aerial tissue - Dark - ZT11
Roots
Root elongation and differentiation zone
Root meristematic zone
Aerial roots and rhizophores
Shoot tips
Microphyll
Strobili
Shoot apical meristem - AC
Shoot apical meristem - Core
Shoot apical meristem - P1
Stem - Top
Stem - Bottom
Whole plant
Aerial tissue - Stress - Dark
Aerial tissue - Stress - High light
Aerial tissue - Stress - Cont
Aerial tissue - Stress - 37C 1h
Aerial tissue - Stress - 37C 3h
Aerial tissue - Stress - 4C 1h
Aerial tissue - Stress - 4C 3h
1.22 -0.25 0.79 0.6 -0.46 0.55 0.12 0.78 1.52 0.02 2.1 1.09 -4.43 2.05 1.73 - - - - - - - - - - 1.12 -0.66 - - - - -
0.94 0.56 -1.03 0.39 1.71 1.15 1.26 0.4 1.01 -0.3 1.56 0.58 - 2.09 0.03 - - - -5.13 -1.91 -0.57 - - - 0.84 -0.72 0.69 - - - - -4.02
0.54 0.34 0.43 1.01 1.12 0.14 0.75 0.8 1.64 0.06 0.74 0.0 -2.34 1.88 0.13 -0.76 -2.27 -1.66 0.45 - -2.73 - -2.32 -2.01 - 0.61 0.69 -1.21 -1.74 -2.44 -2.89 -2.57
Smo4606 (SSADH)
0.27 2.18 - -2.06 1.39 0.82 -0.7 1.58 1.41 1.46 1.45 0.34 - 2.38 - - - - - - 1.77 - - - - - - - - - - -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.